RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 TROAPQ12815 778 aa26.76■■□□□ 1.87
VAPA-205ENST00000578314 GRM4Q14833 912 aa26.76■■□□□ 1.87
VAPA-205ENST00000578314 TMEM67Q5HYA8 995 aa26.76■■□□□ 1.87
VAPA-205ENST00000578314 EEPD1Q7L9B9 569 aa26.76■■□□□ 1.87
VAPA-205ENST00000578314 FBXO11Q86XK2 927 aa26.76■■□□□ 1.87
VAPA-205ENST00000578314 FBXO16Q8IX29 292 aaPredicted RBP26.76■■□□□ 1.87
VAPA-205ENST00000578314 CCDC136Q96JN2 1154 aa26.76■■□□□ 1.87
VAPA-205ENST00000578314 UBE2OQ9C0C9 1292 aaKnown RBP26.76■■□□□ 1.87
VAPA-205ENST00000578314 Q9Y3F1 56 aa26.76■■□□□ 1.87
VAPA-205ENST00000578314 SLC27A2O14975 620 aa26.75■■□□□ 1.87
VAPA-205ENST00000578314 SMPD1P17405 629 aa26.75■■□□□ 1.87
VAPA-205ENST00000578314 EDNRBP24530 442 aa26.75■■□□□ 1.87
VAPA-205ENST00000578314 TLE2Q04725 743 aa26.75■■□□□ 1.87
VAPA-205ENST00000578314 GNASQ5JWF2 1037 aa26.75■■□□□ 1.87
VAPA-205ENST00000578314 TDHQ8IZJ6 230 aa26.75■■□□□ 1.87
VAPA-205ENST00000578314 LRCH3Q96II8 777 aa26.75■■□□□ 1.87
VAPA-205ENST00000578314 ANO2Q9NQ90 1003 aa26.75■■□□□ 1.87
VAPA-205ENST00000578314 STARD7Q9NQZ5 370 aa26.75■■□□□ 1.87
VAPA-205ENST00000578314 PRKAG2Q9UGJ0 569 aa26.75■■□□□ 1.87
VAPA-205ENST00000578314 MRPL11Q9Y3B7 192 aaKnown RBP26.75■■□□□ 1.87
VAPA-205ENST00000578314 ELP1O95163 1332 aa26.74■■□□□ 1.87
VAPA-205ENST00000578314 ASGR1P07306 291 aa26.74■■□□□ 1.87
VAPA-205ENST00000578314 CREB3L3Q68CJ9 461 aa26.74■■□□□ 1.87
VAPA-205ENST00000578314 NOL8Q76FK4 1167 aaKnown RBP26.74■■□□□ 1.87
VAPA-205ENST00000578314 MCF2L2Q86YR7 1114 aa26.74■■□□□ 1.87
VAPA-205ENST00000578314 TBC1D5Q92609 795 aa26.74■■□□□ 1.87
VAPA-205ENST00000578314 MCM3APO60318 1980 aa26.73■■□□□ 1.87
VAPA-205ENST00000578314 RBM47A0AV96 593 aaKnown RBP26.73■■□□□ 1.87
VAPA-205ENST00000578314 MDM2Q00987 491 aaPredicted RBP26.73■■□□□ 1.87
VAPA-205ENST00000578314 CATIPQ7Z7H3 387 aa26.73■■□□□ 1.87
VAPA-205ENST00000578314 GLT1D1Q96MS3 346 aa26.73■■□□□ 1.87
VAPA-205ENST00000578314 MPHOSPH6Q99547 160 aaKnown RBP26.73■■□□□ 1.87
VAPA-205ENST00000578314 AMNQ9BXJ7 453 aa26.73■■□□□ 1.87
VAPA-205ENST00000578314 RIOX1Q9H6W3 641 aa26.73■■□□□ 1.87
VAPA-205ENST00000578314 ZBTB5O15062 677 aa26.72■■□□□ 1.87
VAPA-205ENST00000578314 SLC35G1Q2M3R5 365 aa26.72■■□□□ 1.87
VAPA-205ENST00000578314 ANKRD33Q7Z3H0 272 aa26.72■■□□□ 1.87
VAPA-205ENST00000578314 TLK2Q86UE8 772 aa26.72■■□□□ 1.87
VAPA-205ENST00000578314 SYTL5Q8TDW5 730 aaPredicted RBP26.72■■□□□ 1.87
VAPA-205ENST00000578314 TOX2Q96NM4 488 aa26.72■■□□□ 1.87
VAPA-205ENST00000578314 AP5M1Q9H0R1 490 aa26.72■■□□□ 1.87
VAPA-205ENST00000578314 LY9Q9HBG7 655 aa26.72■■□□□ 1.87
VAPA-205ENST00000578314 PDLIM7Q9NR12 457 aa26.72■■□□□ 1.87
VAPA-205ENST00000578314 B4DLN1 442 aa26.71■■□□□ 1.87
VAPA-205ENST00000578314 DYNC1LI2O43237 492 aaPredicted RBP26.71■■□□□ 1.87
VAPA-205ENST00000578314 PRC1O43663 620 aa26.71■■□□□ 1.87
VAPA-205ENST00000578314 MCM5P33992 734 aa26.71■■□□□ 1.87
VAPA-205ENST00000578314 MRPL12P52815 198 aaKnown RBP26.71■■□□□ 1.87
VAPA-205ENST00000578314 PDE4DQ08499 809 aa26.71■■□□□ 1.87
VAPA-205ENST00000578314 LRIT3Q3SXY7 679 aa26.71■■□□□ 1.87
VAPA-205ENST00000578314 DUSP28Q4G0W2 176 aa26.71■■□□□ 1.87
VAPA-205ENST00000578314 TMEM63BQ5T3F8 832 aa26.71■■□□□ 1.87
VAPA-205ENST00000578314 MAP3K14Q99558 947 aa26.71■■□□□ 1.87
VAPA-205ENST00000578314 LBHD1Q9BQE6 289 aaPredicted RBP26.71■■□□□ 1.87
VAPA-205ENST00000578314 LCTP09848 1927 aa26.71■■□□□ 1.87
VAPA-205ENST00000578314 TRIM43BA6NCK2 446 aa26.7■■□□□ 1.86
VAPA-205ENST00000578314 PPP1R11O60927 126 aaPredicted RBP26.7■■□□□ 1.86
VAPA-205ENST00000578314 CDC45O75419 566 aa26.7■■□□□ 1.86
VAPA-205ENST00000578314 CDK7P50613 346 aa26.7■■□□□ 1.86
VAPA-205ENST00000578314 BEX3Q00994 111 aa26.7■■□□□ 1.86
VAPA-205ENST00000578314 CASC1Q6TDU7 716 aa26.7■■□□□ 1.86
VAPA-205ENST00000578314 SH3RF1Q7Z6J0 888 aa26.7■■□□□ 1.86
VAPA-205ENST00000578314 TMTC2Q8N394 836 aa26.7■■□□□ 1.86
VAPA-205ENST00000578314 TRIM43Q96BQ3 446 aaPredicted RBP26.7■■□□□ 1.86
VAPA-205ENST00000578314 WDR11Q9BZH6 1224 aa26.7■■□□□ 1.86
VAPA-205ENST00000578314 CYTH3O43739 400 aa26.69■■□□□ 1.86
VAPA-205ENST00000578314 PTGS1P23219 599 aa26.69■■□□□ 1.86
VAPA-205ENST00000578314 GHRHRQ02643 423 aa26.69■■□□□ 1.86
VAPA-205ENST00000578314 FSCN1Q16658 493 aaKnown RBP26.69■■□□□ 1.86
VAPA-205ENST00000578314 TMEM87BQ96K49 555 aa26.69■■□□□ 1.86
VAPA-205ENST00000578314 TAAR1Q96RJ0 339 aa26.69■■□□□ 1.86
VAPA-205ENST00000578314 PRDM5Q9NQX1 630 aaPredicted RBP26.69■■□□□ 1.86
VAPA-205ENST00000578314 GPHNQ9NQX3 736 aaPredicted RBP26.69■■□□□ 1.86
VAPA-205ENST00000578314 COL20A1Q9P218 1284 aa26.69■■□□□ 1.86
VAPA-205ENST00000578314 PCDHA1Q9Y5I3 950 aa26.69■■□□□ 1.86
VAPA-205ENST00000578314 LTBP2Q14767 1821 aa26.68■■□□□ 1.86
VAPA-205ENST00000578314 OPLAHO14841 1288 aa26.68■■□□□ 1.86
VAPA-205ENST00000578314 PQBP1O60828 265 aaKnown RBP26.68■■□□□ 1.86
VAPA-205ENST00000578314 CLTBP09497 229 aa26.68■■□□□ 1.86
VAPA-205ENST00000578314 TRAF1Q13077 416 aa26.68■■□□□ 1.86
VAPA-205ENST00000578314 COL9A3Q14050 684 aaPredicted RBP26.68■■□□□ 1.86
VAPA-205ENST00000578314 NSUN6Q8TEA1 469 aaKnown RBP26.68■■□□□ 1.86
VAPA-205ENST00000578314 PIGSQ96S52 555 aa26.68■■□□□ 1.86
VAPA-205ENST00000578314 MAP3K20Q9NYL2 800 aaKnown RBP26.68■■□□□ 1.86
VAPA-205ENST00000578314 A0A0U1RQG5 324 aaPredicted RBP26.67■■□□□ 1.86
VAPA-205ENST00000578314 SH2B2O14492 632 aaPredicted RBP26.67■■□□□ 1.86
VAPA-205ENST00000578314 KIAA0355O15063 1070 aa26.67■■□□□ 1.86
VAPA-205ENST00000578314 ZEB2O60315 1214 aa26.67■■□□□ 1.86
VAPA-205ENST00000578314 CABYRO75952 493 aa26.67■■□□□ 1.86
VAPA-205ENST00000578314 DDAH1O94760 285 aa26.67■■□□□ 1.86
VAPA-205ENST00000578314 RNF20Q5VTR2 975 aa26.67■■□□□ 1.86
VAPA-205ENST00000578314 GPR153Q6NV75 609 aa26.67■■□□□ 1.86
VAPA-205ENST00000578314 ZNF654Q8IZM8 581 aa26.67■■□□□ 1.86
VAPA-205ENST00000578314 SAMD3Q8N6K7 520 aa26.67■■□□□ 1.86
VAPA-205ENST00000578314 VTI1AQ96AJ9 217 aa26.67■■□□□ 1.86
VAPA-205ENST00000578314 IWS1Q96ST2 819 aa26.67■■□□□ 1.86
VAPA-205ENST00000578314 LRRC37A2A6NM11 1700 aa26.66■■□□□ 1.86
VAPA-205ENST00000578314 PNMA6FA0A0J9YX94 578 aa26.66■■□□□ 1.86
VAPA-205ENST00000578314 DCDC2CA8MYV0 355 aa26.66■■□□□ 1.86
VAPA-205ENST00000578314 ARVCFO00192 962 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms