RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 RBBP6Q7Z6E9 1792 aaKnown RBP12.91□□□□□ -0.34
TRAPPC8-204ENST00000578252 ABCB11O95342 1321 aa12.9□□□□□ -0.34
TRAPPC8-204ENST00000578252 CA12O43570 354 aa12.9□□□□□ -0.34
TRAPPC8-204ENST00000578252 CYP2C8P10632 490 aa12.9□□□□□ -0.34
TRAPPC8-204ENST00000578252 TRIM29Q14134 588 aa12.9□□□□□ -0.34
TRAPPC8-204ENST00000578252 E2F4Q16254 413 aa12.9□□□□□ -0.34
TRAPPC8-204ENST00000578252 PKN1Q16512 942 aa12.9□□□□□ -0.34
TRAPPC8-204ENST00000578252 CCDC148Q8NFR7 591 aa12.9□□□□□ -0.34
TRAPPC8-204ENST00000578252 DDX11Q96FC9 970 aa12.9□□□□□ -0.34
TRAPPC8-204ENST00000578252 ALG1Q9BT22 464 aa12.9□□□□□ -0.34
TRAPPC8-204ENST00000578252 MAF1Q9H063 256 aa12.9□□□□□ -0.34
TRAPPC8-204ENST00000578252 BARHL2Q9NY43 387 aa12.9□□□□□ -0.34
TRAPPC8-204ENST00000578252 MORF4L1Q9UBU8 362 aa12.9□□□□□ -0.34
TRAPPC8-204ENST00000578252 ZNF214Q9UL59 606 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC8-204ENST00000578252 CCPG1Q9ULG6 757 aa12.9□□□□□ -0.34
TRAPPC8-204ENST00000578252 HRO43593 1189 aa12.89□□□□□ -0.35
TRAPPC8-204ENST00000578252 SLC25A27O95847 323 aa12.89□□□□□ -0.35
TRAPPC8-204ENST00000578252 FDPSP14324 419 aaKnown RBP12.89□□□□□ -0.35
TRAPPC8-204ENST00000578252 CCNA1P78396 465 aa12.89□□□□□ -0.35
TRAPPC8-204ENST00000578252 TMEM132BQ14DG7 1078 aa12.89□□□□□ -0.35
TRAPPC8-204ENST00000578252 FAM110CQ1W6H9 321 aa12.89□□□□□ -0.35
TRAPPC8-204ENST00000578252 CCDC174Q6PII3 467 aa12.89□□□□□ -0.35
TRAPPC8-204ENST00000578252 HEATR3Q7Z4Q2 680 aa12.89□□□□□ -0.35
TRAPPC8-204ENST00000578252 PIBF1Q8WXW3 757 aa12.89□□□□□ -0.35
TRAPPC8-204ENST00000578252 IPO9Q96P70 1041 aaKnown RBP12.89□□□□□ -0.35
TRAPPC8-204ENST00000578252 ZIC5Q96T25 663 aa12.89□□□□□ -0.35
TRAPPC8-204ENST00000578252 PAGR1Q9BTK6 254 aa12.89□□□□□ -0.35
TRAPPC8-204ENST00000578252 CFHR5Q9BXR6 569 aa12.89□□□□□ -0.35
TRAPPC8-204ENST00000578252 GLT8D2Q9H1C3 349 aa12.89□□□□□ -0.35
TRAPPC8-204ENST00000578252 MRPL11Q9Y3B7 192 aaKnown RBP12.89□□□□□ -0.35
TRAPPC8-204ENST00000578252 PCDHA1Q9Y5I3 950 aa12.89□□□□□ -0.35
TRAPPC8-204ENST00000578252 ZNF536O15090 1300 aa12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 ADGRA2Q96PE1 1338 aa12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 hCG_1642624A0A1W2PR95 340 aa12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 ESYT2A0FGR8 921 aa12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 TLR2O60603 784 aa12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 CALML3P27482 149 aa12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 STAT3P40763 770 aa12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 NAPAP54920 295 aa12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 SNAP25P60880 206 aa12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 ERVK-9P63128 1117 aa12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 ERVK-24P63145 666 aa12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 MAP2K1Q02750 393 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 WWC2Q6AWC2 1192 aa12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 SNRNP48Q6IEG0 339 aaKnown RBP12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 TYW1BQ6NUM6 668 aa12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 RIOX2Q8IUF8 465 aa12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 CPXCR1Q8N123 301 aa12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 SAMD3Q8N6K7 520 aa12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 SHCBP1Q8NEM2 672 aa12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 GPRC5AQ8NFJ5 357 aa12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 C8orf76Q96K31 380 aa12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 SPATC1LQ9H0A9 340 aa12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 RAVER2Q9HCJ3 691 aaKnown RBP12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 SAGE1Q9NXZ1 904 aa12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 BTBD7Q9P203 1132 aa12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 RBPJLQ9UBG7 517 aa12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 FBXO40Q9UH90 709 aa12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 VPS9D1Q9Y2B5 631 aa12.88□□□□□ -0.35
TRAPPC8-204ENST00000578252 STXBP3O00186 592 aa12.87□□□□□ -0.35
TRAPPC8-204ENST00000578252 PPP1R11O60927 126 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC8-204ENST00000578252 PPFIA3O75145 1194 aa12.87□□□□□ -0.35
TRAPPC8-204ENST00000578252 CNMDO75829 334 aa12.87□□□□□ -0.35
TRAPPC8-204ENST00000578252 CRHR2Q13324 411 aa12.87□□□□□ -0.35
TRAPPC8-204ENST00000578252 PLS1Q14651 629 aa12.87□□□□□ -0.35
TRAPPC8-204ENST00000578252 USH1GQ495M9 461 aa12.87□□□□□ -0.35
TRAPPC8-204ENST00000578252 GALNT17Q6IS24 598 aa12.87□□□□□ -0.35
TRAPPC8-204ENST00000578252 CHST13Q8NET6 341 aa12.87□□□□□ -0.35
TRAPPC8-204ENST00000578252 BICD2Q8TD16 824 aa12.87□□□□□ -0.35
TRAPPC8-204ENST00000578252 GPKOWQ92917 476 aaPredicted RBP eCLIP12.87□□□□□ -0.35
TRAPPC8-204ENST00000578252 AGBL1Q96MI9 1066 aa12.87□□□□□ -0.35
TRAPPC8-204ENST00000578252 MROH8Q9H579 483 aa12.87□□□□□ -0.35
TRAPPC8-204ENST00000578252 BCRP11274 1271 aa12.86□□□□□ -0.35
TRAPPC8-204ENST00000578252 ALAS1P13196 640 aa12.86□□□□□ -0.35
TRAPPC8-204ENST00000578252 GNA11P29992 359 aa12.86□□□□□ -0.35
TRAPPC8-204ENST00000578252 SAFBQ15424 915 aaKnown RBP eCLIP12.86□□□□□ -0.35
TRAPPC8-204ENST00000578252 LARP1BQ659C4 914 aaKnown RBP12.86□□□□□ -0.35
TRAPPC8-204ENST00000578252 MCTP2Q6DN12 878 aa12.86□□□□□ -0.35
TRAPPC8-204ENST00000578252 C17orf99Q6UX52 265 aa12.86□□□□□ -0.35
TRAPPC8-204ENST00000578252 MCF2L2Q86YR7 1114 aa12.86□□□□□ -0.35
TRAPPC8-204ENST00000578252 ANKRD13CQ8N6S4 541 aa12.86□□□□□ -0.35
TRAPPC8-204ENST00000578252 COA7Q96BR5 231 aa12.86□□□□□ -0.35
TRAPPC8-204ENST00000578252 TRERF1Q96PN7 1200 aa12.86□□□□□ -0.35
TRAPPC8-204ENST00000578252 BEGAINQ9BUH8 593 aa12.86□□□□□ -0.35
TRAPPC8-204ENST00000578252 MOV10L1Q9BXT6 1211 aaKnown RBP12.86□□□□□ -0.35
TRAPPC8-204ENST00000578252 ZMYND12Q9H0C1 365 aa12.86□□□□□ -0.35
TRAPPC8-204ENST00000578252 ACAD9Q9H845 621 aa12.86□□□□□ -0.35
TRAPPC8-204ENST00000578252 BRMS1Q9HCU9 246 aa12.86□□□□□ -0.35
TRAPPC8-204ENST00000578252 C6orf50Q9HD87 102 aa12.86□□□□□ -0.35
TRAPPC8-204ENST00000578252 TXNRD2Q9NNW7 524 aa12.86□□□□□ -0.35
TRAPPC8-204ENST00000578252 RNF146Q9NTX7 359 aa12.86□□□□□ -0.35
TRAPPC8-204ENST00000578252 MAP3K20Q9NYL2 800 aaKnown RBP12.86□□□□□ -0.35
TRAPPC8-204ENST00000578252 VPS54Q9P1Q0 977 aa12.86□□□□□ -0.35
TRAPPC8-204ENST00000578252 H3BQV1 296 aa12.85□□□□□ -0.35
TRAPPC8-204ENST00000578252 ADCY7P51828 1080 aa12.85□□□□□ -0.35
TRAPPC8-204ENST00000578252 MRPL12P52815 198 aaKnown RBP12.85□□□□□ -0.35
TRAPPC8-204ENST00000578252 NLRP5P59047 1200 aa12.85□□□□□ -0.35
TRAPPC8-204ENST00000578252 IFFO2Q5TF58 517 aa12.85□□□□□ -0.35
TRAPPC8-204ENST00000578252 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.85□□□□□ -0.35
TRAPPC8-204ENST00000578252 CCAR1Q8IX12 1150 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms