RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 BRPF3Q9ULD4 1205 aa25.73■■□□□ 1.71
SMARCD2-206ENST00000577990 NR2E3Q9Y5X4 410 aa25.73■■□□□ 1.71
SMARCD2-206ENST00000577990 DNAH12Q6ZR08 3092 aa25.73■■□□□ 1.71
SMARCD2-206ENST00000577990 PNMA6FA0A0J9YX94 578 aa25.72■■□□□ 1.71
SMARCD2-206ENST00000577990 KLF18A0A0U1RQI7 1052 aa25.72■■□□□ 1.71
SMARCD2-206ENST00000577990 ZBTB43O43298 467 aa25.72■■□□□ 1.71
SMARCD2-206ENST00000577990 ZNF865P0CJ78 1059 aaPredicted RBP25.72■■□□□ 1.71
SMARCD2-206ENST00000577990 TRAF1Q13077 416 aa25.72■■□□□ 1.71
SMARCD2-206ENST00000577990 MCF2L2Q86YR7 1114 aa25.72■■□□□ 1.71
SMARCD2-206ENST00000577990 PURBQ96QR8 312 aaKnown RBP25.72■■□□□ 1.71
SMARCD2-206ENST00000577990 ADD3Q9UEY8 706 aaKnown RBP25.72■■□□□ 1.71
SMARCD2-206ENST00000577990 TMTC3Q6ZXV5 915 aa25.71■■□□□ 1.71
SMARCD2-206ENST00000577990 FBXL16Q8N461 479 aa25.71■■□□□ 1.71
SMARCD2-206ENST00000577990 SRBD1Q8N5C6 995 aaKnown RBP25.71■■□□□ 1.71
SMARCD2-206ENST00000577990 PIBF1Q8WXW3 757 aa25.71■■□□□ 1.71
SMARCD2-206ENST00000577990 RRP36Q96EU6 259 aaKnown RBP25.71■■□□□ 1.71
SMARCD2-206ENST00000577990 ABHD16BQ9H3Z7 469 aa25.71■■□□□ 1.71
SMARCD2-206ENST00000577990 ZSWIM6Q9HCJ5 1215 aa25.71■■□□□ 1.71
SMARCD2-206ENST00000577990 ZHX1Q9UKY1 873 aaPredicted RBP25.71■■□□□ 1.71
SMARCD2-206ENST00000577990 PCDHA1Q9Y5I3 950 aa25.71■■□□□ 1.71
SMARCD2-206ENST00000577990 RCAN1P53805 252 aa25.7■■□□□ 1.7
SMARCD2-206ENST00000577990 ACVR2BQ13705 512 aa25.7■■□□□ 1.7
SMARCD2-206ENST00000577990 RUFY3Q7L099 469 aa25.7■■□□□ 1.7
SMARCD2-206ENST00000577990 BRF1Q92994 677 aa25.7■■□□□ 1.7
SMARCD2-206ENST00000577990 TM6SF1Q9BZW5 370 aa25.7■■□□□ 1.7
SMARCD2-206ENST00000577990 C11orf49Q9H6J7 331 aa25.7■■□□□ 1.7
SMARCD2-206ENST00000577990 RBM28Q9NW13 759 aaKnown RBP25.7■■□□□ 1.7
SMARCD2-206ENST00000577990 AKR1A1P14550 325 aa25.69■■□□□ 1.7
SMARCD2-206ENST00000577990 ALDH5A1P51649 535 aaPredicted RBP25.69■■□□□ 1.7
SMARCD2-206ENST00000577990 APOBRQ0VD83 1088 aa25.69■■□□□ 1.7
SMARCD2-206ENST00000577990 RTN1Q16799 776 aa25.69■■□□□ 1.7
SMARCD2-206ENST00000577990 ANO1Q5XXA6 986 aa25.69■■□□□ 1.7
SMARCD2-206ENST00000577990 CMTR1Q8N1G2 835 aaKnown RBP25.69■■□□□ 1.7
SMARCD2-206ENST00000577990 TBC1D5Q92609 795 aa25.69■■□□□ 1.7
SMARCD2-206ENST00000577990 AGXT2Q9BYV1 514 aa25.69■■□□□ 1.7
SMARCD2-206ENST00000577990 SEC63Q9UGP8 760 aaKnown RBP25.69■■□□□ 1.7
SMARCD2-206ENST00000577990 NAP1L2Q9ULW6 460 aaPredicted RBP25.69■■□□□ 1.7
SMARCD2-206ENST00000577990 CYP46A1Q9Y6A2 500 aa25.69■■□□□ 1.7
SMARCD2-206ENST00000577990 LRRC37A2A6NM11 1700 aa25.68■■□□□ 1.7
SMARCD2-206ENST00000577990 LOC102724159A0A0B4J2E5 919 aa25.68■■□□□ 1.7
SMARCD2-206ENST00000577990 GOLGA8AA7E2F4 631 aa25.68■■□□□ 1.7
SMARCD2-206ENST00000577990 GOLGA8BA8MQT2 603 aa25.68■■□□□ 1.7
SMARCD2-206ENST00000577990 PWP2Q15269 919 aaKnown RBP25.68■■□□□ 1.7
SMARCD2-206ENST00000577990 C7orf61Q8IZ16 206 aa25.68■■□□□ 1.7
SMARCD2-206ENST00000577990 MORC4Q8TE76 937 aa25.68■■□□□ 1.7
SMARCD2-206ENST00000577990 KATNBL1Q9H079 304 aa25.68■■□□□ 1.7
SMARCD2-206ENST00000577990 RBM27Q9P2N5 1060 aaKnown RBP25.68■■□□□ 1.7
SMARCD2-206ENST00000577990 SZT2Q5T011 3432 aa25.68■■□□□ 1.7
SMARCD2-206ENST00000577990 OPLAHO14841 1288 aa25.67■■□□□ 1.7
SMARCD2-206ENST00000577990 RARBP10826 455 aa25.67■■□□□ 1.7
SMARCD2-206ENST00000577990 FXR1P51114 621 aaKnown RBP eCLIP25.67■■□□□ 1.7
SMARCD2-206ENST00000577990 DNERQ8NFT8 737 aa25.67■■□□□ 1.7
SMARCD2-206ENST00000577990 SYTL5Q8TDW5 730 aaPredicted RBP25.67■■□□□ 1.7
SMARCD2-206ENST00000577990 FAM184BQ9ULE4 1060 aa25.67■■□□□ 1.7
SMARCD2-206ENST00000577990 DDX49Q9Y6V7 483 aaKnown RBP25.67■■□□□ 1.7
SMARCD2-206ENST00000577990 ANAPC15P60006 121 aa25.66■■□□□ 1.7
SMARCD2-206ENST00000577990 GHRHRQ02643 423 aa25.66■■□□□ 1.7
SMARCD2-206ENST00000577990 CCDC82Q8N4S0 544 aa25.66■■□□□ 1.7
SMARCD2-206ENST00000577990 MPHOSPH6Q99547 160 aaKnown RBP25.66■■□□□ 1.7
SMARCD2-206ENST00000577990 UPF3BQ9BZI7 483 aaKnown RBP25.66■■□□□ 1.7
SMARCD2-206ENST00000577990 SEC24BO95487 1268 aa25.65■■□□□ 1.7
SMARCD2-206ENST00000577990 CFBP00751 764 aa25.65■■□□□ 1.7
SMARCD2-206ENST00000577990 METAP2P50579 478 aaKnown RBP eCLIP25.65■■□□□ 1.7
SMARCD2-206ENST00000577990 HSD17B4P51659 736 aa25.65■■□□□ 1.7
SMARCD2-206ENST00000577990 COL20A1Q9P218 1284 aa25.65■■□□□ 1.7
SMARCD2-206ENST00000577990 CNTNAP5Q8WYK1 1306 aa25.64■■□□□ 1.7
SMARCD2-206ENST00000577990 PPP2R5BQ15173 497 aa25.64■■□□□ 1.7
SMARCD2-206ENST00000577990 CCDC144BQ3MJ40 725 aa25.64■■□□□ 1.7
SMARCD2-206ENST00000577990 C8orf34Q49A92 452 aa25.64■■□□□ 1.7
SMARCD2-206ENST00000577990 SAMD3Q8N6K7 520 aa25.64■■□□□ 1.7
SMARCD2-206ENST00000577990 ARRDC4Q8NCT1 418 aa25.64■■□□□ 1.7
SMARCD2-206ENST00000577990 LENG1Q96BZ8 264 aaPredicted RBP25.64■■□□□ 1.7
SMARCD2-206ENST00000577990 VTA1Q9NP79 307 aa25.64■■□□□ 1.7
SMARCD2-206ENST00000577990 XPNPEP3Q9NQH7 507 aa25.64■■□□□ 1.7
SMARCD2-206ENST00000577990 MAP3K20Q9NYL2 800 aaKnown RBP25.64■■□□□ 1.7
SMARCD2-206ENST00000577990 PCDH10Q9P2E7 1040 aa25.64■■□□□ 1.7
SMARCD2-206ENST00000577990 ZMYND8Q9ULU4 1186 aaPredicted RBP25.64■■□□□ 1.7
SMARCD2-206ENST00000577990 NID2Q14112 1375 aa25.64■■□□□ 1.69
SMARCD2-206ENST00000577990 LAMA3Q16787 3333 aa25.63■■□□□ 1.69
SMARCD2-206ENST00000577990 B4DLN1 442 aa25.63■■□□□ 1.69
SMARCD2-206ENST00000577990 COL6A1P12109 1028 aa25.63■■□□□ 1.69
SMARCD2-206ENST00000577990 EDNRBP24530 442 aa25.63■■□□□ 1.69
SMARCD2-206ENST00000577990 CDC27P30260 824 aa25.63■■□□□ 1.69
SMARCD2-206ENST00000577990 MRPL12P52815 198 aaKnown RBP25.63■■□□□ 1.69
SMARCD2-206ENST00000577990 FBXO16Q8IX29 292 aaPredicted RBP25.63■■□□□ 1.69
SMARCD2-206ENST00000577990 TAAR1Q96RJ0 339 aa25.63■■□□□ 1.69
SMARCD2-206ENST00000577990 FAM217BQ9NTX9 383 aaPredicted RBP25.63■■□□□ 1.69
SMARCD2-206ENST00000577990 CCDC196A0A1B0GTZ2 297 aa25.62■■□□□ 1.69
SMARCD2-206ENST00000577990 DNM1LO00429 736 aa25.62■■□□□ 1.69
SMARCD2-206ENST00000577990 EVCP57679 992 aa25.62■■□□□ 1.69
SMARCD2-206ENST00000577990 PDE4DQ08499 809 aa25.62■■□□□ 1.69
SMARCD2-206ENST00000577990 FUT2Q10981 343 aa25.62■■□□□ 1.69
SMARCD2-206ENST00000577990 TOB2Q14106 344 aaPredicted RBP25.62■■□□□ 1.69
SMARCD2-206ENST00000577990 EEPD1Q7L9B9 569 aa25.62■■□□□ 1.69
SMARCD2-206ENST00000577990 NSUN6Q8TEA1 469 aaKnown RBP25.62■■□□□ 1.69
SMARCD2-206ENST00000577990 RMDN3Q96TC7 470 aa25.62■■□□□ 1.69
SMARCD2-206ENST00000577990 PRO3102Q9H379 93 aa25.62■■□□□ 1.69
SMARCD2-206ENST00000577990 PDRG1Q9NUG6 133 aa25.62■■□□□ 1.69
SMARCD2-206ENST00000577990 hCG_1642624A0A1W2PR95 340 aa25.61■■□□□ 1.69
SMARCD2-206ENST00000577990 GCOM1H8Y6P7 765 aaPredicted RBP25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms