RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 PDIA3P30101 505 aaKnown RBP17.57■□□□□ 0.4
LITAF-217ENST00000575426 CDC27P30260 824 aa17.57■□□□□ 0.4
LITAF-217ENST00000575426 CCND3P30281 292 aaPredicted RBP17.57■□□□□ 0.4
LITAF-217ENST00000575426 ADD1P35611 737 aaKnown RBP17.57■□□□□ 0.4
LITAF-217ENST00000575426 CCT2P78371 535 aaKnown RBP17.57■□□□□ 0.4
LITAF-217ENST00000575426 LARP6Q9BRS8 491 aaKnown RBP17.57■□□□□ 0.4
LITAF-217ENST00000575426 PAK6Q9NQU5 681 aaPredicted RBP17.57■□□□□ 0.4
LITAF-217ENST00000575426 MAP3K20Q9NYL2 800 aaKnown RBP17.57■□□□□ 0.4
LITAF-217ENST00000575426 FRMPD3Q5JV73 1810 aa17.56■□□□□ 0.4
LITAF-217ENST00000575426 SOWAHBA6NEL2 793 aa17.56■□□□□ 0.4
LITAF-217ENST00000575426 MSCO60682 206 aa17.56■□□□□ 0.4
LITAF-217ENST00000575426 SGPL1O95470 568 aa17.56■□□□□ 0.4
LITAF-217ENST00000575426 IGHA2P01877 340 aa17.56■□□□□ 0.4
LITAF-217ENST00000575426 CYBAP13498 195 aa17.56■□□□□ 0.4
LITAF-217ENST00000575426 GJA8P48165 433 aa17.56■□□□□ 0.4
LITAF-217ENST00000575426 AKAP17AQ02040 695 aaKnown RBP17.56■□□□□ 0.4
LITAF-217ENST00000575426 PRAMEF19Q5SWL8 479 aa17.56■□□□□ 0.4
LITAF-217ENST00000575426 CPLX2Q6PUV4 134 aaKnown RBP17.56■□□□□ 0.4
LITAF-217ENST00000575426 SLC30A10Q6XR72 485 aa17.56■□□□□ 0.4
LITAF-217ENST00000575426 ARMCX2Q7L311 632 aa17.56■□□□□ 0.4
LITAF-217ENST00000575426 U2AF1L4Q8WU68 220 aaKnown RBP17.56■□□□□ 0.4
LITAF-217ENST00000575426 ABHD16BQ9H3Z7 469 aa17.56■□□□□ 0.4
LITAF-217ENST00000575426 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.56■□□□□ 0.4
LITAF-217ENST00000575426 V9GY48 417 aaPredicted RBP17.56■□□□□ 0.4
LITAF-217ENST00000575426 CENPFP49454 3210 aa17.56■□□□□ 0.4
LITAF-217ENST00000575426 CNTNAP5Q8WYK1 1306 aa17.55■□□□□ 0.4
LITAF-217ENST00000575426 LOC102724159A0A0B4J2E5 919 aa17.55■□□□□ 0.4
LITAF-217ENST00000575426 hCG_1642624A0A1W2PR95 340 aa17.55■□□□□ 0.4
LITAF-217ENST00000575426 CPLX1O14810 134 aa17.55■□□□□ 0.4
LITAF-217ENST00000575426 EN2P19622 333 aaPredicted RBP17.55■□□□□ 0.4
LITAF-217ENST00000575426 ALDH5A1P51649 535 aaPredicted RBP17.55■□□□□ 0.4
LITAF-217ENST00000575426 STK3Q13188 491 aa17.55■□□□□ 0.4
LITAF-217ENST00000575426 PWP2Q15269 919 aaKnown RBP17.55■□□□□ 0.4
LITAF-217ENST00000575426 DNERQ8NFT8 737 aa17.55■□□□□ 0.4
LITAF-217ENST00000575426 TBC1D5Q92609 795 aa17.55■□□□□ 0.4
LITAF-217ENST00000575426 CUL5Q93034 780 aa17.55■□□□□ 0.4
LITAF-217ENST00000575426 SLKQ9H2G2 1235 aaPredicted RBP17.55■□□□□ 0.4
LITAF-217ENST00000575426 FAM217BQ9NTX9 383 aaPredicted RBP17.55■□□□□ 0.4
LITAF-217ENST00000575426 RBM27Q9P2N5 1060 aaKnown RBP17.55■□□□□ 0.4
LITAF-217ENST00000575426 NID2Q14112 1375 aa17.54■□□□□ 0.4
LITAF-217ENST00000575426 GCOM1H8Y6P7 765 aaPredicted RBP17.54■□□□□ 0.4
LITAF-217ENST00000575426 SNAI1O95863 264 aaPredicted RBP17.54■□□□□ 0.4
LITAF-217ENST00000575426 POLR2MP0CAP2 368 aa17.54■□□□□ 0.4
LITAF-217ENST00000575426 RBM25P49756 843 aaKnown RBP17.54■□□□□ 0.4
LITAF-217ENST00000575426 AK2P54819 239 aa17.54■□□□□ 0.4
LITAF-217ENST00000575426 HEATR3Q7Z4Q2 680 aa17.54■□□□□ 0.4
LITAF-217ENST00000575426 FGD4Q96M96 766 aa17.54■□□□□ 0.4
LITAF-217ENST00000575426 PURBQ96QR8 312 aaKnown RBP17.54■□□□□ 0.4
LITAF-217ENST00000575426 DDX20Q9UHI6 824 aaKnown RBP17.54■□□□□ 0.4
LITAF-217ENST00000575426 ZHX1Q9UKY1 873 aaPredicted RBP17.54■□□□□ 0.4
LITAF-217ENST00000575426 hCG_1984214I3L0E3 225 aa17.53■□□□□ 0.4
LITAF-217ENST00000575426 SEPT4O43236 478 aa17.53■□□□□ 0.4
LITAF-217ENST00000575426 HSD17B4P51659 736 aa17.53■□□□□ 0.4
LITAF-217ENST00000575426 PDE4DQ08499 809 aa17.53■□□□□ 0.4
LITAF-217ENST00000575426 ACVR2BQ13705 512 aa17.53■□□□□ 0.4
LITAF-217ENST00000575426 ARHGEF16Q5VV41 709 aa17.53■□□□□ 0.4
LITAF-217ENST00000575426 ZNF713Q8N859 430 aaPredicted RBP17.53■□□□□ 0.4
LITAF-217ENST00000575426 TRPV1Q8NER1 839 aa17.53■□□□□ 0.4
LITAF-217ENST00000575426 SYTL5Q8TDW5 730 aaPredicted RBP17.53■□□□□ 0.4
LITAF-217ENST00000575426 NSUN6Q8TEA1 469 aaKnown RBP17.53■□□□□ 0.4
LITAF-217ENST00000575426 TAAR1Q96RJ0 339 aa17.53■□□□□ 0.4
LITAF-217ENST00000575426 NCOA5Q9HCD5 579 aaKnown RBP17.53■□□□□ 0.4
LITAF-217ENST00000575426 FAM184BQ9ULE4 1060 aa17.53■□□□□ 0.4
LITAF-217ENST00000575426 KIAA1217Q5T5P2 1943 aa17.53■□□□□ 0.4
LITAF-217ENST00000575426 PRPF3O43395 683 aaKnown RBP17.52■□□□□ 0.4
LITAF-217ENST00000575426 AKR1A1P14550 325 aa17.52■□□□□ 0.4
LITAF-217ENST00000575426 IFNAR1P17181 557 aa17.52■□□□□ 0.4
LITAF-217ENST00000575426 SSRP1Q08945 709 aaKnown RBP17.52■□□□□ 0.4
LITAF-217ENST00000575426 FUT2Q10981 343 aa17.52■□□□□ 0.4
LITAF-217ENST00000575426 NOL8Q76FK4 1167 aaKnown RBP17.52■□□□□ 0.4
LITAF-217ENST00000575426 TRIM22Q8IYM9 498 aa17.52■□□□□ 0.4
LITAF-217ENST00000575426 SMARCC2Q8TAQ2 1214 aa17.52■□□□□ 0.4
LITAF-217ENST00000575426 RMDN3Q96TC7 470 aa17.52■□□□□ 0.4
LITAF-217ENST00000575426 PSTPIP2Q9H939 334 aa17.52■□□□□ 0.4
LITAF-217ENST00000575426 OPLAHO14841 1288 aa17.51■□□□□ 0.39
LITAF-217ENST00000575426 ZNF865P0CJ78 1059 aaPredicted RBP17.51■□□□□ 0.39
LITAF-217ENST00000575426 HOXA13P31271 388 aaPredicted RBP17.51■□□□□ 0.39
LITAF-217ENST00000575426 NAPAP54920 295 aa17.51■□□□□ 0.39
LITAF-217ENST00000575426 GHRHRQ02643 423 aa17.51■□□□□ 0.39
LITAF-217ENST00000575426 EEPD1Q7L9B9 569 aa17.51■□□□□ 0.39
LITAF-217ENST00000575426 FCHSD1Q86WN1 690 aa17.51■□□□□ 0.39
LITAF-217ENST00000575426 GPKOWQ92917 476 aaPredicted RBP eCLIP17.51■□□□□ 0.39
LITAF-217ENST00000575426 PHKBQ93100 1093 aa17.51■□□□□ 0.39
LITAF-217ENST00000575426 IWS1Q96ST2 819 aa17.51■□□□□ 0.39
LITAF-217ENST00000575426 SLC26A6Q9BXS9 759 aa17.51■□□□□ 0.39
LITAF-217ENST00000575426 RNF26Q9BY78 433 aaPredicted RBP17.51■□□□□ 0.39
LITAF-217ENST00000575426 BACH2Q9BYV9 841 aa17.51■□□□□ 0.39
LITAF-217ENST00000575426 CRISPLD2Q9H0B8 497 aa17.51■□□□□ 0.39
LITAF-217ENST00000575426 VTA1Q9NP79 307 aa17.51■□□□□ 0.39
LITAF-217ENST00000575426 TPCN1Q9ULQ1 816 aa17.51■□□□□ 0.39
LITAF-217ENST00000575426 ASTN1O14525 1302 aa17.5■□□□□ 0.39
LITAF-217ENST00000575426 PFKFB2O60825 505 aa17.5■□□□□ 0.39
LITAF-217ENST00000575426 CDKL5O76039 1030 aa17.5■□□□□ 0.39
LITAF-217ENST00000575426 RARBP10826 455 aa17.5■□□□□ 0.39
LITAF-217ENST00000575426 SCG2P13521 617 aa17.5■□□□□ 0.39
LITAF-217ENST00000575426 RGS19P49795 217 aa17.5■□□□□ 0.39
LITAF-217ENST00000575426 NTRK3Q16288 839 aa17.5■□□□□ 0.39
LITAF-217ENST00000575426 PFKFB3Q16875 520 aaPredicted RBP17.5■□□□□ 0.39
LITAF-217ENST00000575426 ANO1Q5XXA6 986 aa17.5■□□□□ 0.39
LITAF-217ENST00000575426 LHX8Q68G74 356 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms