RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 POTEDQ86YR6 584 aa10.01□□□□□ -0.81
NCBP3-204ENST00000574911 ZSCAN29Q8IWY8 852 aaPredicted RBP10.01□□□□□ -0.81
NCBP3-204ENST00000574911 ZNF713Q8N859 430 aaPredicted RBP10.01□□□□□ -0.81
NCBP3-204ENST00000574911 MTMR9Q96QG7 549 aa10.01□□□□□ -0.81
NCBP3-204ENST00000574911 VAT1LQ9HCJ6 419 aa10.01□□□□□ -0.81
NCBP3-204ENST00000574911 TMEM260Q9NX78 707 aa10.01□□□□□ -0.81
NCBP3-204ENST00000574911 BIN2Q9UBW5 565 aaPredicted RBP10.01□□□□□ -0.81
NCBP3-204ENST00000574911 TRIM10Q9UDY6 481 aa10.01□□□□□ -0.81
NCBP3-204ENST00000574911 CTAGE15A4D2H0 777 aa10□□□□□ -0.81
NCBP3-204ENST00000574911 PES1O00541 588 aaKnown RBP10□□□□□ -0.81
NCBP3-204ENST00000574911 CTAGE8P0CG41 777 aa10□□□□□ -0.81
NCBP3-204ENST00000574911 MIIPQ5JXC2 388 aa10□□□□□ -0.81
NCBP3-204ENST00000574911 FAM182BQ5T319 152 aa10□□□□□ -0.81
NCBP3-204ENST00000574911 CNNM4Q6P4Q7 775 aa10□□□□□ -0.81
NCBP3-204ENST00000574911 TRAPPC11Q7Z392 1133 aa10□□□□□ -0.81
NCBP3-204ENST00000574911 CTAGE6Q86UF2 777 aa10□□□□□ -0.81
NCBP3-204ENST00000574911 SLF2Q8IX21 1173 aa10□□□□□ -0.81
NCBP3-204ENST00000574911 CTAGE4Q8IX94 777 aa10□□□□□ -0.81
NCBP3-204ENST00000574911 REXO1Q8N1G1 1221 aaKnown RBP10□□□□□ -0.81
NCBP3-204ENST00000574911 KIAA0895Q8NCT3 520 aa10□□□□□ -0.81
NCBP3-204ENST00000574911 CALML4Q96GE6 196 aa10□□□□□ -0.81
NCBP3-204ENST00000574911 RBM17Q96I25 401 aaKnown RBP10□□□□□ -0.81
NCBP3-204ENST00000574911 UBA5Q9GZZ9 404 aa10□□□□□ -0.81
NCBP3-204ENST00000574911 ZKSCAN7Q9P0L1 754 aaPredicted RBP10□□□□□ -0.81
NCBP3-204ENST00000574911 GUCA1BQ9UMX6 200 aa10□□□□□ -0.81
NCBP3-204ENST00000574911 A0A1W2PQJ5 194 aa10□□□□□ -0.81
NCBP3-204ENST00000574911 POLR3GO15318 223 aaPredicted RBP10□□□□□ -0.81
NCBP3-204ENST00000574911 EDIL3O43854 480 aa10□□□□□ -0.81
NCBP3-204ENST00000574911 PDHBP11177 359 aa10□□□□□ -0.81
NCBP3-204ENST00000574911 KLK7P49862 253 aa10□□□□□ -0.81
NCBP3-204ENST00000574911 FXR2P51116 673 aaKnown RBP eCLIP10□□□□□ -0.81
NCBP3-204ENST00000574911 KRT83P78385 493 aa10□□□□□ -0.81
NCBP3-204ENST00000574911 ZBED6P86452 979 aa10□□□□□ -0.81
NCBP3-204ENST00000574911 TBC1D8BQ0IIM8 1120 aa10□□□□□ -0.81
NCBP3-204ENST00000574911 GRB10Q13322 594 aa10□□□□□ -0.81
NCBP3-204ENST00000574911 FIGNQ5HY92 759 aa10□□□□□ -0.81
NCBP3-204ENST00000574911 MSL3Q8N5Y2 521 aaKnown RBP10□□□□□ -0.81
NCBP3-204ENST00000574911 TBC1D22AQ8WUA7 517 aa10□□□□□ -0.81
NCBP3-204ENST00000574911 PNMA5Q96PV4 448 aa10□□□□□ -0.81
NCBP3-204ENST00000574911 SEMA6BQ9H3T3 888 aa10□□□□□ -0.81
NCBP3-204ENST00000574911 AGPAT5Q9NUQ2 364 aa10□□□□□ -0.81
NCBP3-204ENST00000574911 IGKV6D-41A0A0C4DH26 115 aa9.99□□□□□ -0.81
NCBP3-204ENST00000574911 ADRA2BP18089 450 aa9.99□□□□□ -0.81
NCBP3-204ENST00000574911 CDK17Q00537 523 aa9.99□□□□□ -0.81
NCBP3-204ENST00000574911 MFSD14BQ5SR56 506 aa9.99□□□□□ -0.81
NCBP3-204ENST00000574911 CENPPQ6IPU0 288 aa9.99□□□□□ -0.81
NCBP3-204ENST00000574911 SV2BQ7L1I2 683 aa9.99□□□□□ -0.81
NCBP3-204ENST00000574911 CCDC170Q8IYT3 715 aa9.99□□□□□ -0.81
NCBP3-204ENST00000574911 ERGIC2Q96RQ1 377 aa9.99□□□□□ -0.81
NCBP3-204ENST00000574911 BLOC1S4Q9NUP1 217 aa9.99□□□□□ -0.81
NCBP3-204ENST00000574911 FOCADQ5VW36 1801 aa9.99□□□□□ -0.81
NCBP3-204ENST00000574911 EIF3CLB5ME19 914 aaKnown RBP9.99□□□□□ -0.81
NCBP3-204ENST00000574911 BBOX1O75936 387 aa9.99□□□□□ -0.81
NCBP3-204ENST00000574911 SNHG28P0DPA3 235 aa9.99□□□□□ -0.81
NCBP3-204ENST00000574911 CYLC1P35663 651 aaPredicted RBP9.99□□□□□ -0.81
NCBP3-204ENST00000574911 TXKP42681 527 aa9.99□□□□□ -0.81
NCBP3-204ENST00000574911 MTIF2P46199 727 aaKnown RBP9.99□□□□□ -0.81
NCBP3-204ENST00000574911 GABPAQ06546 454 aa9.99□□□□□ -0.81
NCBP3-204ENST00000574911 CALCRLQ16602 461 aa9.99□□□□□ -0.81
NCBP3-204ENST00000574911 ASPRV1Q53RT3 343 aa9.99□□□□□ -0.81
NCBP3-204ENST00000574911 PAPD7Q5XG87 772 aaKnown RBP9.99□□□□□ -0.81
NCBP3-204ENST00000574911 UNC13DQ70J99 1090 aa9.99□□□□□ -0.81
NCBP3-204ENST00000574911 TBC1D16Q8TBP0 767 aa9.99□□□□□ -0.81
NCBP3-204ENST00000574911 EIF3CQ99613 913 aaKnown RBP9.99□□□□□ -0.81
NCBP3-204ENST00000574911 NOC4LQ9BVI4 516 aaKnown RBP9.99□□□□□ -0.81
NCBP3-204ENST00000574911 NHEJ1Q9H9Q4 299 aaPredicted RBP9.99□□□□□ -0.81
NCBP3-204ENST00000574911 MTMR4Q9NYA4 1195 aa9.99□□□□□ -0.81
NCBP3-204ENST00000574911 STK17AQ9UEE5 414 aa9.99□□□□□ -0.81
NCBP3-204ENST00000574911 POLLQ9UGP5 575 aa9.99□□□□□ -0.81
NCBP3-204ENST00000574911 FRMPD2Q68DX3 1309 aaPredicted RBP9.99□□□□□ -0.81
NCBP3-204ENST00000574911 PVALEFA0A1B0GWK0 134 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 MYMKA6NI61 221 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 TOM1O60784 492 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 ERLIN1O75477 346 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 TUBBP07437 444 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 TRIM21P19474 475 aaKnown RBP9.98□□□□□ -0.81
NCBP3-204ENST00000574911 ST5P78524 1137 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 CCDC122Q5T0U0 273 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 NCAPH2Q6IBW4 605 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 HDXQ7Z353 690 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 HPS3Q969F9 1004 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 JAKMIP2Q96AA8 810 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 IQCDQ96DY2 449 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 ABCB6Q9NP58 842 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 ZCCHC17Q9NP64 241 aaKnown RBP9.98□□□□□ -0.81
NCBP3-204ENST00000574911 ZNHIT6Q9NWK9 470 aaKnown RBP9.98□□□□□ -0.81
NCBP3-204ENST00000574911 LRWD1Q9UFC0 647 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 L1RE1Q9UN81 338 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 TFR2Q9UP52 801 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 DAGLAQ9Y4D2 1042 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 NKRFO15226 690 aaKnown RBP eCLIP9.98□□□□□ -0.81
NCBP3-204ENST00000574911 SLC37A4O43826 429 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 ATP1A1P05023 1023 aaKnown RBP9.98□□□□□ -0.81
NCBP3-204ENST00000574911 SERPINB2P05120 415 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 RHOXF2BP0C7M4 288 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 HOXA10P31260 410 aaPredicted RBP9.98□□□□□ -0.81
NCBP3-204ENST00000574911 ADCY7P51828 1080 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 VSNL1P62760 191 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 TAF3Q5VWG9 929 aa9.98□□□□□ -0.81
NCBP3-204ENST00000574911 NOA1Q8NC60 698 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms