RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 NUTM2BA6NNL0 878 aaPredicted RBP21.27■■□□□ 1
SCARF1-206ENST00000573852 NUTM2EB1AL46 878 aaPredicted RBP21.27■■□□□ 1
SCARF1-206ENST00000573852 CCNT1O60563 726 aaKnown RBP21.27■■□□□ 1
SCARF1-206ENST00000573852 OR52Z1P0C646 297 aa21.27■■□□□ 1
SCARF1-206ENST00000573852 TSPY3P0CV98 308 aa21.27■■□□□ 1
SCARF1-206ENST00000573852 TSPY8P0CW00 308 aa21.27■■□□□ 1
SCARF1-206ENST00000573852 VAV2P52735 878 aa21.27■■□□□ 1
SCARF1-206ENST00000573852 C2orf54Q08AI8 447 aa21.27■■□□□ 1
SCARF1-206ENST00000573852 CCNI2Q6ZMN8 369 aaPredicted RBP21.27■■□□□ 1
SCARF1-206ENST00000573852 AK8Q96MA6 479 aa21.27■■□□□ 1
SCARF1-206ENST00000573852 KIF5AQ12840 1032 aa21.26■□□□□ 0.99
SCARF1-206ENST00000573852 FAM114A1Q8IWE2 563 aa21.26■□□□□ 0.99
SCARF1-206ENST00000573852 HINFPQ9BQA5 517 aa21.26■□□□□ 0.99
SCARF1-206ENST00000573852 TMEM47Q9BQJ4 181 aa21.26■□□□□ 0.99
SCARF1-206ENST00000573852 SEMA6BQ9H3T3 888 aa21.26■□□□□ 0.99
SCARF1-206ENST00000573852 COL16A1Q07092 1604 aaPredicted RBP21.26■□□□□ 0.99
SCARF1-206ENST00000573852 A0A1W2PQJ5 194 aa21.26■□□□□ 0.99
SCARF1-206ENST00000573852 KCNQ2O43526 872 aa21.26■□□□□ 0.99
SCARF1-206ENST00000573852 CDK17Q00537 523 aa21.26■□□□□ 0.99
SCARF1-206ENST00000573852 CCDC24Q8N4L8 307 aa21.26■□□□□ 0.99
SCARF1-206ENST00000573852 KIAA0895Q8NCT3 520 aa21.26■□□□□ 0.99
SCARF1-206ENST00000573852 SECISBP2LQ93073 1101 aaKnown RBP21.26■□□□□ 0.99
SCARF1-206ENST00000573852 CCDC47Q96A33 483 aaKnown RBP21.26■□□□□ 0.99
SCARF1-206ENST00000573852 STX8Q9UNK0 236 aa21.26■□□□□ 0.99
SCARF1-206ENST00000573852 MAST2Q6P0Q8 1798 aa21.26■□□□□ 0.99
SCARF1-206ENST00000573852 KCNQ4P56696 695 aa21.25■□□□□ 0.99
SCARF1-206ENST00000573852 FIGNQ5HY92 759 aa21.25■□□□□ 0.99
SCARF1-206ENST00000573852 AFAP1L1Q8TED9 768 aa21.25■□□□□ 0.99
SCARF1-206ENST00000573852 CCDC42Q96M95 316 aa21.25■□□□□ 0.99
SCARF1-206ENST00000573852 MMTAG2Q9BU76 263 aaKnown RBP21.25■□□□□ 0.99
SCARF1-206ENST00000573852 ZMYND12Q9H0C1 365 aa21.25■□□□□ 0.99
SCARF1-206ENST00000573852 RASSF4Q9H2L5 321 aa21.25■□□□□ 0.99
SCARF1-206ENST00000573852 ROBO1Q9Y6N7 1651 aa21.25■□□□□ 0.99
SCARF1-206ENST00000573852 TECP42680 631 aa21.25■□□□□ 0.99
SCARF1-206ENST00000573852 LINC00116Q8NCU8 138 aa21.25■□□□□ 0.99
SCARF1-206ENST00000573852 SELENOOQ9BVL4 669 aa21.25■□□□□ 0.99
SCARF1-206ENST00000573852 EPHB6O15197 1021 aa21.24■□□□□ 0.99
SCARF1-206ENST00000573852 GGCXP38435 758 aa21.24■□□□□ 0.99
SCARF1-206ENST00000573852 NAPAP54920 295 aa21.24■□□□□ 0.99
SCARF1-206ENST00000573852 CREG2Q8IUH2 290 aa21.24■□□□□ 0.99
SCARF1-206ENST00000573852 TRIM34Q9BYJ4 488 aa21.24■□□□□ 0.99
SCARF1-206ENST00000573852 ANKRD2Q9GZV1 360 aa21.24■□□□□ 0.99
SCARF1-206ENST00000573852 KLRF2D3W0D1 207 aa21.24■□□□□ 0.99
SCARF1-206ENST00000573852 AGPSO00116 658 aa21.24■□□□□ 0.99
SCARF1-206ENST00000573852 SPA17Q15506 151 aa21.24■□□□□ 0.99
SCARF1-206ENST00000573852 CCDC96Q2M329 555 aa21.24■□□□□ 0.99
SCARF1-206ENST00000573852 TMED8Q6PL24 325 aaPredicted RBP21.24■□□□□ 0.99
SCARF1-206ENST00000573852 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.24■□□□□ 0.99
SCARF1-206ENST00000573852 ZNF444Q8N0Y2 327 aaPredicted RBP21.24■□□□□ 0.99
SCARF1-206ENST00000573852 CDCA7Q9BWT1 371 aaPredicted RBP21.24■□□□□ 0.99
SCARF1-206ENST00000573852 SLC39A2Q9NP94 309 aa21.24■□□□□ 0.99
SCARF1-206ENST00000573852 ARHGAP20Q9P2F6 1191 aa21.24■□□□□ 0.99
SCARF1-206ENST00000573852 CAPN6Q9Y6Q1 641 aa21.24■□□□□ 0.99
SCARF1-206ENST00000573852 FKBP15Q5T1M5 1219 aa21.23■□□□□ 0.99
SCARF1-206ENST00000573852 MLXIPQ9HAP2 919 aa21.23■□□□□ 0.99
SCARF1-206ENST00000573852 SNX12Q9UMY4 172 aa21.23■□□□□ 0.99
SCARF1-206ENST00000573852 PLAGL2Q9UPG8 496 aa21.23■□□□□ 0.99
SCARF1-206ENST00000573852 ROBO3Q96MS0 1386 aa21.23■□□□□ 0.99
SCARF1-206ENST00000573852 SPATA31A1Q5TZJ5 1347 aa21.23■□□□□ 0.99
SCARF1-206ENST00000573852 NONOQ15233 471 aaKnown RBP eCLIP21.23■□□□□ 0.99
SCARF1-206ENST00000573852 EZH2Q15910 746 aaKnown RBP21.23■□□□□ 0.99
SCARF1-206ENST00000573852 KRT25Q7Z3Z0 450 aa21.23■□□□□ 0.99
SCARF1-206ENST00000573852 GOLGA6L1Q8N7Z2 621 aa21.23■□□□□ 0.99
SCARF1-206ENST00000573852 TSGA10Q9BZW7 698 aa21.23■□□□□ 0.99
SCARF1-206ENST00000573852 SMCO2A6NFE2 343 aa21.22■□□□□ 0.99
SCARF1-206ENST00000573852 HNRNPH3P31942 346 aaKnown RBP21.22■□□□□ 0.99
SCARF1-206ENST00000573852 DIXDC1Q155Q3 683 aa21.22■□□□□ 0.99
SCARF1-206ENST00000573852 GRIK5Q16478 980 aa21.22■□□□□ 0.99
SCARF1-206ENST00000573852 SPTY2D1Q68D10 685 aaPredicted RBP21.22■□□□□ 0.99
SCARF1-206ENST00000573852 C2CD5Q86YS7 1000 aa21.22■□□□□ 0.99
SCARF1-206ENST00000573852 NLRP3Q96P20 1036 aa21.22■□□□□ 0.99
SCARF1-206ENST00000573852 SIK3Q9Y2K2 1263 aa21.22■□□□□ 0.99
SCARF1-206ENST00000573852 JRKLQ9Y4A0 524 aa21.22■□□□□ 0.99
SCARF1-206ENST00000573852 PCDHA13Q9Y5I0 950 aa21.22■□□□□ 0.99
SCARF1-206ENST00000573852 RASA1P20936 1047 aa21.22■□□□□ 0.99
SCARF1-206ENST00000573852 CENPPQ6IPU0 288 aa21.22■□□□□ 0.99
SCARF1-206ENST00000573852 SLC51AQ86UW1 340 aa21.22■□□□□ 0.99
SCARF1-206ENST00000573852 GPIHBP1Q8IV16 184 aa21.22■□□□□ 0.99
SCARF1-206ENST00000573852 TGFBRAP1Q8WUH2 860 aa21.22■□□□□ 0.99
SCARF1-206ENST00000573852 HDAC7Q8WUI4 952 aa21.22■□□□□ 0.99
SCARF1-206ENST00000573852 DRC1Q96MC2 740 aa21.22■□□□□ 0.99
SCARF1-206ENST00000573852 CRACR2AQ9BSW2 395 aa21.22■□□□□ 0.99
SCARF1-206ENST00000573852 IFIH1Q9BYX4 1025 aaKnown RBP21.22■□□□□ 0.99
SCARF1-206ENST00000573852 PLEKHA4Q9H4M7 779 aa21.22■□□□□ 0.99
SCARF1-206ENST00000573852 FAM207AQ9NSI2 230 aaPredicted RBP21.22■□□□□ 0.99
SCARF1-206ENST00000573852 MYH10P35580 1976 aa21.22■□□□□ 0.99
SCARF1-206ENST00000573852 COL5A3P25940 1745 aaPredicted RBP21.22■□□□□ 0.99
SCARF1-206ENST00000573852 IRS2Q9Y4H2 1338 aa21.22■□□□□ 0.99
SCARF1-206ENST00000573852 CNNM4Q6P4Q7 775 aa21.22■□□□□ 0.99
SCARF1-206ENST00000573852 FNBP4Q8N3X1 1017 aaPredicted RBP21.22■□□□□ 0.99
SCARF1-206ENST00000573852 TRIM58Q8NG06 486 aa21.22■□□□□ 0.99
SCARF1-206ENST00000573852 SH2D4AQ9H788 454 aa21.22■□□□□ 0.99
SCARF1-206ENST00000573852 RSPH14Q9UHP6 348 aa21.22■□□□□ 0.99
SCARF1-206ENST00000573852 SAP30BPQ9UHR5 308 aaKnown RBP21.22■□□□□ 0.99
SCARF1-206ENST00000573852 MOCS3O95396 460 aa21.21■□□□□ 0.99
SCARF1-206ENST00000573852 LDHBP07195 334 aaKnown RBP21.21■□□□□ 0.99
SCARF1-206ENST00000573852 PPP1R2P41236 205 aa21.21■□□□□ 0.99
SCARF1-206ENST00000573852 AMPD3Q01432 767 aa21.21■□□□□ 0.99
SCARF1-206ENST00000573852 VWA3BQ502W6 1294 aa21.21■□□□□ 0.99
SCARF1-206ENST00000573852 COBLL1Q53SF7 1204 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms