RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 MAP4K1Q92918 833 aa14.81□□□□□ -0.04
NPLOC4-213ENST00000573519 BADQ92934 168 aa14.81□□□□□ -0.04
NPLOC4-213ENST00000573519 JMJD4Q9H9V9 463 aa14.81□□□□□ -0.04
NPLOC4-213ENST00000573519 ABCB11O95342 1321 aa14.81□□□□□ -0.04
NPLOC4-213ENST00000573519 MCM3APO60318 1980 aa14.8□□□□□ -0.04
NPLOC4-213ENST00000573519 TRIM43BA6NCK2 446 aa14.8□□□□□ -0.04
NPLOC4-213ENST00000573519 DCDC2CA8MYV0 355 aa14.8□□□□□ -0.04
NPLOC4-213ENST00000573519 KLRF2D3W0D1 207 aa14.8□□□□□ -0.04
NPLOC4-213ENST00000573519 TMEM67Q5HYA8 995 aa14.8□□□□□ -0.04
NPLOC4-213ENST00000573519 TMEM63BQ5T3F8 832 aa14.8□□□□□ -0.04
NPLOC4-213ENST00000573519 STOX1Q6ZVD7 989 aa14.8□□□□□ -0.04
NPLOC4-213ENST00000573519 FBXO11Q86XK2 927 aa14.8□□□□□ -0.04
NPLOC4-213ENST00000573519 MORC4Q8TE76 937 aa14.8□□□□□ -0.04
NPLOC4-213ENST00000573519 TRIM43Q96BQ3 446 aaPredicted RBP14.8□□□□□ -0.04
NPLOC4-213ENST00000573519 ANO2Q9NQ90 1003 aa14.8□□□□□ -0.04
NPLOC4-213ENST00000573519 TMEM39AQ9NV64 488 aa14.8□□□□□ -0.04
NPLOC4-213ENST00000573519 GNEQ9Y223 722 aaKnown RBP14.8□□□□□ -0.04
NPLOC4-213ENST00000573519 B4DLN1 442 aa14.79□□□□□ -0.04
NPLOC4-213ENST00000573519 ELP1O95163 1332 aa14.79□□□□□ -0.04
NPLOC4-213ENST00000573519 LCTP09848 1927 aa14.79□□□□□ -0.04
NPLOC4-213ENST00000573519 RAG1P15918 1043 aa14.79□□□□□ -0.04
NPLOC4-213ENST00000573519 MRPL12P52815 198 aaKnown RBP14.79□□□□□ -0.04
NPLOC4-213ENST00000573519 FSCN1Q16658 493 aaKnown RBP14.79□□□□□ -0.04
NPLOC4-213ENST00000573519 HOMER1Q86YM7 354 aa14.79□□□□□ -0.04
NPLOC4-213ENST00000573519 MCF2L2Q86YR7 1114 aa14.79□□□□□ -0.04
NPLOC4-213ENST00000573519 DNERQ8NFT8 737 aa14.79□□□□□ -0.04
NPLOC4-213ENST00000573519 TBC1D5Q92609 795 aa14.79□□□□□ -0.04
NPLOC4-213ENST00000573519 ESYT1Q9BSJ8 1104 aa14.79□□□□□ -0.04
NPLOC4-213ENST00000573519 WDR11Q9BZH6 1224 aa14.79□□□□□ -0.04
NPLOC4-213ENST00000573519 SENP2Q9HC62 589 aa14.79□□□□□ -0.04
NPLOC4-213ENST00000573519 MAD2L2Q9UI95 211 aa14.79□□□□□ -0.04
NPLOC4-213ENST00000573519 MRPL11Q9Y3B7 192 aaKnown RBP14.79□□□□□ -0.04
NPLOC4-213ENST00000573519 RANBP2P49792 3224 aaKnown RBP14.79□□□□□ -0.04
NPLOC4-213ENST00000573519 DNAH12Q6ZR08 3092 aa14.79□□□□□ -0.04
NPLOC4-213ENST00000573519 MROH7Q68CQ1 1323 aa14.78□□□□□ -0.04
NPLOC4-213ENST00000573519 LOC102724159A0A0B4J2E5 919 aa14.78□□□□□ -0.04
NPLOC4-213ENST00000573519 A0A0U1RQG5 324 aaPredicted RBP14.78□□□□□ -0.04
NPLOC4-213ENST00000573519 CTAGE5O15320 804 aa14.78□□□□□ -0.04
NPLOC4-213ENST00000573519 ZEB2O60315 1214 aa14.78□□□□□ -0.04
NPLOC4-213ENST00000573519 PWP2Q15269 919 aaKnown RBP14.78□□□□□ -0.04
NPLOC4-213ENST00000573519 LRIT3Q3SXY7 679 aa14.78□□□□□ -0.04
NPLOC4-213ENST00000573519 CASC1Q6TDU7 716 aa14.78□□□□□ -0.04
NPLOC4-213ENST00000573519 CXCL17Q6UXB2 119 aa14.78□□□□□ -0.04
NPLOC4-213ENST00000573519 ANKRD33Q7Z3H0 272 aa14.78□□□□□ -0.04
NPLOC4-213ENST00000573519 CATIPQ7Z7H3 387 aa14.78□□□□□ -0.04
NPLOC4-213ENST00000573519 AMNQ9BXJ7 453 aa14.78□□□□□ -0.04
NPLOC4-213ENST00000573519 LSG1Q9H089 658 aaKnown RBP14.78□□□□□ -0.04
NPLOC4-213ENST00000573519 TRIOBPQ9H2D6 2365 aa14.78□□□□□ -0.04
NPLOC4-213ENST00000573519 LTBP2Q14767 1821 aa14.78□□□□□ -0.04
NPLOC4-213ENST00000573519 PALM3A6NDB9 673 aaPredicted RBP14.77□□□□□ -0.05
NPLOC4-213ENST00000573519 CFBP00751 764 aa14.77□□□□□ -0.05
NPLOC4-213ENST00000573519 ITGB8P26012 769 aa14.77□□□□□ -0.05
NPLOC4-213ENST00000573519 ANTXR2P58335 489 aa14.77□□□□□ -0.05
NPLOC4-213ENST00000573519 FAAP100Q0VG06 881 aa14.77□□□□□ -0.05
NPLOC4-213ENST00000573519 GRM4Q14833 912 aa14.77□□□□□ -0.05
NPLOC4-213ENST00000573519 DUSP28Q4G0W2 176 aa14.77□□□□□ -0.05
NPLOC4-213ENST00000573519 BMP2KLQ5H9B9 411 aa14.77□□□□□ -0.05
NPLOC4-213ENST00000573519 MB21D2Q8IYB1 491 aaPredicted RBP14.77□□□□□ -0.05
NPLOC4-213ENST00000573519 RGS22Q8NE09 1264 aa14.77□□□□□ -0.05
NPLOC4-213ENST00000573519 OR6J1Q8NGC5 347 aa14.77□□□□□ -0.05
NPLOC4-213ENST00000573519 TOX2Q96NM4 488 aa14.77□□□□□ -0.05
NPLOC4-213ENST00000573519 TAAR1Q96RJ0 339 aa14.77□□□□□ -0.05
NPLOC4-213ENST00000573519 Q9Y3F1 56 aa14.77□□□□□ -0.05
NPLOC4-213ENST00000573519 ARVCFO00192 962 aa14.76□□□□□ -0.05
NPLOC4-213ENST00000573519 SLC27A2O14975 620 aa14.76□□□□□ -0.05
NPLOC4-213ENST00000573519 ZBTB5O15062 677 aa14.76□□□□□ -0.05
NPLOC4-213ENST00000573519 KIAA0355O15063 1070 aa14.76□□□□□ -0.05
NPLOC4-213ENST00000573519 TLR3O15455 904 aaKnown RBP14.76□□□□□ -0.05
NPLOC4-213ENST00000573519 PRC1O43663 620 aa14.76□□□□□ -0.05
NPLOC4-213ENST00000573519 CABYRO75952 493 aa14.76□□□□□ -0.05
NPLOC4-213ENST00000573519 CENPBP07199 599 aaPredicted RBP14.76□□□□□ -0.05
NPLOC4-213ENST00000573519 NKX3-2P78367 333 aa14.76□□□□□ -0.05
NPLOC4-213ENST00000573519 PPP2R5BQ15173 497 aa14.76□□□□□ -0.05
NPLOC4-213ENST00000573519 NFXL1Q6ZNB6 911 aa14.76□□□□□ -0.05
NPLOC4-213ENST00000573519 SYTL5Q8TDW5 730 aaPredicted RBP14.76□□□□□ -0.05
NPLOC4-213ENST00000573519 NSUN6Q8TEA1 469 aaKnown RBP14.76□□□□□ -0.05
NPLOC4-213ENST00000573519 PIBF1Q8WXW3 757 aa14.76□□□□□ -0.05
NPLOC4-213ENST00000573519 PIGSQ96S52 555 aa14.76□□□□□ -0.05
NPLOC4-213ENST00000573519 PCDHA1Q9Y5I3 950 aa14.76□□□□□ -0.05
NPLOC4-213ENST00000573519 RBM47A0AV96 593 aaKnown RBP14.75□□□□□ -0.05
NPLOC4-213ENST00000573519 PPP1R11O60927 126 aaPredicted RBP14.75□□□□□ -0.05
NPLOC4-213ENST00000573519 MYL3P08590 195 aa14.75□□□□□ -0.05
NPLOC4-213ENST00000573519 TXNP10599 105 aaKnown RBP14.75□□□□□ -0.05
NPLOC4-213ENST00000573519 EIF2AK2P19525 551 aaKnown RBP14.75□□□□□ -0.05
NPLOC4-213ENST00000573519 EDNRBP24530 442 aa14.75□□□□□ -0.05
NPLOC4-213ENST00000573519 MCM5P33992 734 aa14.75□□□□□ -0.05
NPLOC4-213ENST00000573519 CDK7P50613 346 aa14.75□□□□□ -0.05
NPLOC4-213ENST00000573519 PSMC6P62333 389 aa14.75□□□□□ -0.05
NPLOC4-213ENST00000573519 TROAPQ12815 778 aa14.75□□□□□ -0.05
NPLOC4-213ENST00000573519 SHHQ15465 462 aa14.75□□□□□ -0.05
NPLOC4-213ENST00000573519 C9orf50Q5SZB4 431 aa14.75□□□□□ -0.05
NPLOC4-213ENST00000573519 ARHGEF16Q5VV41 709 aa14.75□□□□□ -0.05
NPLOC4-213ENST00000573519 CREB3L3Q68CJ9 461 aa14.75□□□□□ -0.05
NPLOC4-213ENST00000573519 IGDCC4Q8TDY8 1250 aa14.75□□□□□ -0.05
NPLOC4-213ENST00000573519 SCFD2Q8WU76 684 aa14.75□□□□□ -0.05
NPLOC4-213ENST00000573519 RMDN3Q96TC7 470 aa14.75□□□□□ -0.05
NPLOC4-213ENST00000573519 MYL10Q9BUA6 226 aa14.75□□□□□ -0.05
NPLOC4-213ENST00000573519 COL20A1Q9P218 1284 aa14.75□□□□□ -0.05
NPLOC4-213ENST00000573519 CCDC69A6NI79 296 aa14.74□□□□□ -0.05
NPLOC4-213ENST00000573519 CPT1AP50416 773 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms