RNA–Protein interactions for RNA: ENST00000571958.1

PRPF8-203, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 3

Gene PRPF8, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-203ENST00000571958 VTA1Q9NP79 307 aa11.87□□□□□ -0.51
PRPF8-203ENST00000571958 TRMT13Q9NUP7 481 aaKnown RBP11.87□□□□□ -0.51
PRPF8-203ENST00000571958 RAPGEFL1Q9UHV5 662 aa11.87□□□□□ -0.51
PRPF8-203ENST00000571958 Q9Y3F1 56 aa11.87□□□□□ -0.51
PRPF8-203ENST00000571958 SLC4A7Q9Y6M7 1214 aa11.87□□□□□ -0.51
PRPF8-203ENST00000571958 XIRP2A4UGR9 3374 aa11.87□□□□□ -0.51
PRPF8-203ENST00000571958 ZBBXA8MT70 800 aa11.86□□□□□ -0.51
PRPF8-203ENST00000571958 ICAM1P05362 532 aa11.86□□□□□ -0.51
PRPF8-203ENST00000571958 CYP2C9P11712 490 aa11.86□□□□□ -0.51
PRPF8-203ENST00000571958 SLC16A2P36021 539 aa11.86□□□□□ -0.51
PRPF8-203ENST00000571958 BAATQ14032 418 aaPredicted RBP11.86□□□□□ -0.51
PRPF8-203ENST00000571958 DUSP28Q4G0W2 176 aa11.86□□□□□ -0.51
PRPF8-203ENST00000571958 PPP4R3BQ5MIZ7 849 aa11.86□□□□□ -0.51
PRPF8-203ENST00000571958 TTBK2Q6IQ55 1244 aa11.86□□□□□ -0.51
PRPF8-203ENST00000571958 MICALL1Q8N3F8 863 aa11.86□□□□□ -0.51
PRPF8-203ENST00000571958 MORC4Q8TE76 937 aa11.86□□□□□ -0.51
PRPF8-203ENST00000571958 UHRF1Q96T88 793 aaPredicted RBP11.86□□□□□ -0.51
PRPF8-203ENST00000571958 RANBP17Q9H2T7 1088 aaKnown RBP11.86□□□□□ -0.51
PRPF8-203ENST00000571958 PCDHA11Q9Y5I1 949 aa11.86□□□□□ -0.51
PRPF8-203ENST00000571958 SCN10AQ9Y5Y9 1956 aa11.86□□□□□ -0.51
PRPF8-203ENST00000571958 PTPRSQ13332 1948 aa11.86□□□□□ -0.51
PRPF8-203ENST00000571958 TNKSO95271 1327 aa11.86□□□□□ -0.51
PRPF8-203ENST00000571958 NCOR1O75376 2440 aa11.85□□□□□ -0.51
PRPF8-203ENST00000571958 NFIBO00712 420 aa11.85□□□□□ -0.51
PRPF8-203ENST00000571958 ERC2O15083 957 aa11.85□□□□□ -0.51
PRPF8-203ENST00000571958 RANBP6O60518 1105 aaKnown RBP11.85□□□□□ -0.51
PRPF8-203ENST00000571958 ATP2A2P16615 1042 aaKnown RBP11.85□□□□□ -0.51
PRPF8-203ENST00000571958 ALDH5A1P51649 535 aaPredicted RBP11.85□□□□□ -0.51
PRPF8-203ENST00000571958 PURAQ00577 322 aaKnown RBP11.85□□□□□ -0.51
PRPF8-203ENST00000571958 TTLL4Q14679 1199 aa11.85□□□□□ -0.51
PRPF8-203ENST00000571958 VPS53Q5VIR6 699 aa11.85□□□□□ -0.51
PRPF8-203ENST00000571958 DEFB128Q7Z7B8 93 aa11.85□□□□□ -0.51
PRPF8-203ENST00000571958 RPUSD2Q8IZ73 545 aaKnown RBP11.85□□□□□ -0.51
PRPF8-203ENST00000571958 PPP1R13LQ8WUF5 828 aa11.85□□□□□ -0.51
PRPF8-203ENST00000571958 WDR11Q9BZH6 1224 aa11.85□□□□□ -0.51
PRPF8-203ENST00000571958 FRMPD2Q68DX3 1309 aaPredicted RBP11.85□□□□□ -0.51
PRPF8-203ENST00000571958 COL4A4P53420 1690 aaPredicted RBP11.84□□□□□ -0.51
PRPF8-203ENST00000571958 PTPDC1A2A3K4 754 aa11.84□□□□□ -0.51
PRPF8-203ENST00000571958 MYL3P08590 195 aa11.84□□□□□ -0.51
PRPF8-203ENST00000571958 NOVP48745 357 aa11.84□□□□□ -0.51
PRPF8-203ENST00000571958 TFF2Q03403 129 aa11.84□□□□□ -0.51
PRPF8-203ENST00000571958 SLC30A10Q6XR72 485 aa11.84□□□□□ -0.51
PRPF8-203ENST00000571958 IL27Q8NEV9 243 aa11.84□□□□□ -0.51
PRPF8-203ENST00000571958 DCAF4Q8WV16 495 aa11.84□□□□□ -0.51
PRPF8-203ENST00000571958 NECAB3Q96P71 396 aaPredicted RBP11.84□□□□□ -0.51
PRPF8-203ENST00000571958 POLR3EQ9NVU0 708 aa11.84□□□□□ -0.51
PRPF8-203ENST00000571958 ADD3Q9UEY8 706 aaKnown RBP11.84□□□□□ -0.51
PRPF8-203ENST00000571958 ANAPC4Q9UJX5 808 aa11.84□□□□□ -0.51
PRPF8-203ENST00000571958 RBM47A0AV96 593 aaKnown RBP11.83□□□□□ -0.52
PRPF8-203ENST00000571958 RFXAPO00287 272 aa11.83□□□□□ -0.52
PRPF8-203ENST00000571958 CA3P07451 260 aa11.83□□□□□ -0.52
PRPF8-203ENST00000571958 SUPT20HL2P0C7V6 817 aa11.83□□□□□ -0.52
PRPF8-203ENST00000571958 MX1P20591 662 aa11.83□□□□□ -0.52
PRPF8-203ENST00000571958 CALML3P27482 149 aa11.83□□□□□ -0.52
PRPF8-203ENST00000571958 CPT1AP50416 773 aa11.83□□□□□ -0.52
PRPF8-203ENST00000571958 CACNB1Q02641 598 aaPredicted RBP11.83□□□□□ -0.52
PRPF8-203ENST00000571958 FAM47CQ5HY64 1035 aa11.83□□□□□ -0.52
PRPF8-203ENST00000571958 SYDE2Q5VT97 1194 aa11.83□□□□□ -0.52
PRPF8-203ENST00000571958 BTNL9Q6UXG8 535 aa11.83□□□□□ -0.52
PRPF8-203ENST00000571958 OR6J1Q8NGC5 347 aa11.83□□□□□ -0.52
PRPF8-203ENST00000571958 TMEM47Q9BQJ4 181 aa11.83□□□□□ -0.52
PRPF8-203ENST00000571958 MTG1Q9BT17 334 aaPredicted RBP11.83□□□□□ -0.52
PRPF8-203ENST00000571958 CERS4Q9HA82 394 aa11.83□□□□□ -0.52
PRPF8-203ENST00000571958 GPCPD1Q9NPB8 672 aa11.83□□□□□ -0.52
PRPF8-203ENST00000571958 PCDHB15Q9Y5E8 787 aa11.83□□□□□ -0.52
PRPF8-203ENST00000571958 PRRC2BQ5JSZ5 2229 aaKnown RBP11.83□□□□□ -0.52
PRPF8-203ENST00000571958 TRIP12Q14669 1992 aaPredicted RBP11.83□□□□□ -0.52
PRPF8-203ENST00000571958 SALL3Q9BXA9 1300 aa11.83□□□□□ -0.52
PRPF8-203ENST00000571958 TET1Q8NFU7 2136 aa11.83□□□□□ -0.52
PRPF8-203ENST00000571958 ORC4O43929 436 aa11.82□□□□□ -0.52
PRPF8-203ENST00000571958 PFKMP08237 780 aa11.82□□□□□ -0.52
PRPF8-203ENST00000571958 KCNQ1P51787 676 aa11.82□□□□□ -0.52
PRPF8-203ENST00000571958 PPP2R5BQ15173 497 aa11.82□□□□□ -0.52
PRPF8-203ENST00000571958 NBPF20Q3BBV1 942 aa11.82□□□□□ -0.52
PRPF8-203ENST00000571958 TMEM67Q5HYA8 995 aa11.82□□□□□ -0.52
PRPF8-203ENST00000571958 RRP12Q5JTH9 1297 aaKnown RBP11.82□□□□□ -0.52
PRPF8-203ENST00000571958 CLEC4DQ8WXI8 215 aa11.82□□□□□ -0.52
PRPF8-203ENST00000571958 COPS5Q92905 334 aa11.82□□□□□ -0.52
PRPF8-203ENST00000571958 TSPYL2Q9H2G4 693 aaPredicted RBP11.82□□□□□ -0.52
PRPF8-203ENST00000571958 GPHNQ9NQX3 736 aaPredicted RBP11.82□□□□□ -0.52
PRPF8-203ENST00000571958 TOMM22Q9NS69 142 aa11.82□□□□□ -0.52
PRPF8-203ENST00000571958 LOC102724159A0A0B4J2E5 919 aa11.81□□□□□ -0.52
PRPF8-203ENST00000571958 EPOPA6NHQ4 379 aa11.81□□□□□ -0.52
PRPF8-203ENST00000571958 ARHGEF15O94989 841 aa11.81□□□□□ -0.52
PRPF8-203ENST00000571958 FGRP09769 529 aa11.81□□□□□ -0.52
PRPF8-203ENST00000571958 TOP1P11387 765 aaKnown RBP11.81□□□□□ -0.52
PRPF8-203ENST00000571958 ACTN1P12814 892 aa11.81□□□□□ -0.52
PRPF8-203ENST00000571958 BMP1P13497 986 aa11.81□□□□□ -0.52
PRPF8-203ENST00000571958 PDE4DQ08499 809 aa11.81□□□□□ -0.52
PRPF8-203ENST00000571958 PWP2Q15269 919 aaKnown RBP11.81□□□□□ -0.52
PRPF8-203ENST00000571958 SKIV2LQ15477 1246 aaKnown RBP11.81□□□□□ -0.52
PRPF8-203ENST00000571958 KRT40Q6A162 431 aa11.81□□□□□ -0.52
PRPF8-203ENST00000571958 RNF207Q6ZRF8 634 aa11.81□□□□□ -0.52
PRPF8-203ENST00000571958 MTCH2Q9Y6C9 303 aa11.81□□□□□ -0.52
PRPF8-203ENST00000571958 KIAA1217Q5T5P2 1943 aa11.81□□□□□ -0.52
PRPF8-203ENST00000571958 RAD50Q92878 1312 aa11.81□□□□□ -0.52
PRPF8-203ENST00000571958 PITPNM1O00562 1244 aa11.8□□□□□ -0.52
PRPF8-203ENST00000571958 IQCF3P0C7M6 154 aa11.8□□□□□ -0.52
PRPF8-203ENST00000571958 PDHBP11177 359 aa11.8□□□□□ -0.52
PRPF8-203ENST00000571958 EDNRBP24530 442 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms