RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 FAAP100Q0VG06 881 aa16.07■□□□□ 0.16
RAB40B-204ENST00000571554 TRDNQ13061 729 aa16.07■□□□□ 0.16
RAB40B-204ENST00000571554 SEC23AQ15436 765 aa16.07■□□□□ 0.16
RAB40B-204ENST00000571554 SHHQ15465 462 aa16.07■□□□□ 0.16
RAB40B-204ENST00000571554 QRICH1Q2TAL8 776 aa16.07■□□□□ 0.16
RAB40B-204ENST00000571554 CXCL17Q6UXB2 119 aa16.07■□□□□ 0.16
RAB40B-204ENST00000571554 STOX1Q6ZVD7 989 aa16.07■□□□□ 0.16
RAB40B-204ENST00000571554 AP5M1Q9H0R1 490 aa16.07■□□□□ 0.16
RAB40B-204ENST00000571554 VTA1Q9NP79 307 aa16.07■□□□□ 0.16
RAB40B-204ENST00000571554 U3KPZ7 1027 aaPredicted RBP16.07■□□□□ 0.16
RAB40B-204ENST00000571554 DCDC2CA8MYV0 355 aa16.06■□□□□ 0.16
RAB40B-204ENST00000571554 E7EWF7 191 aa16.06■□□□□ 0.16
RAB40B-204ENST00000571554 RAG1P15918 1043 aa16.06■□□□□ 0.16
RAB40B-204ENST00000571554 NT5C2P49902 561 aa16.06■□□□□ 0.16
RAB40B-204ENST00000571554 FSCN1Q16658 493 aaKnown RBP16.06■□□□□ 0.16
RAB40B-204ENST00000571554 MORC4Q8TE76 937 aa16.06■□□□□ 0.16
RAB40B-204ENST00000571554 JMJD4Q9H9V9 463 aa16.06■□□□□ 0.16
RAB40B-204ENST00000571554 LAMA2P24043 3122 aaKnown RBP16.06■□□□□ 0.16
RAB40B-204ENST00000571554 ELP1O95163 1332 aa16.05■□□□□ 0.16
RAB40B-204ENST00000571554 A0A0U1RQG5 324 aaPredicted RBP16.05■□□□□ 0.16
RAB40B-204ENST00000571554 IFIT3O14879 490 aaKnown RBP16.05■□□□□ 0.16
RAB40B-204ENST00000571554 KIAA0355O15063 1070 aa16.05■□□□□ 0.16
RAB40B-204ENST00000571554 EPHB4P54760 987 aa16.05■□□□□ 0.16
RAB40B-204ENST00000571554 PSMC6P62333 389 aa16.05■□□□□ 0.16
RAB40B-204ENST00000571554 PDE4DQ08499 809 aa16.05■□□□□ 0.16
RAB40B-204ENST00000571554 IQSEC1Q6DN90 963 aa16.05■□□□□ 0.16
RAB40B-204ENST00000571554 ANKRD33Q7Z3H0 272 aa16.05■□□□□ 0.16
RAB40B-204ENST00000571554 RALYLQ86SE5 291 aaKnown RBP16.05■□□□□ 0.16
RAB40B-204ENST00000571554 DEFB123Q8N688 67 aa16.05■□□□□ 0.16
RAB40B-204ENST00000571554 WDR11Q9BZH6 1224 aa16.05■□□□□ 0.16
RAB40B-204ENST00000571554 RBM8AQ9Y5S9 174 aaKnown RBP16.05■□□□□ 0.16
RAB40B-204ENST00000571554 ABCB11O95342 1321 aa16.04■□□□□ 0.16
RAB40B-204ENST00000571554 ARVCFO00192 962 aa16.04■□□□□ 0.16
RAB40B-204ENST00000571554 FBXO11Q86XK2 927 aa16.04■□□□□ 0.16
RAB40B-204ENST00000571554 COPS5Q92905 334 aa16.04■□□□□ 0.16
RAB40B-204ENST00000571554 TOX2Q96NM4 488 aa16.04■□□□□ 0.16
RAB40B-204ENST00000571554 COL20A1Q9P218 1284 aa16.04■□□□□ 0.16
RAB40B-204ENST00000571554 MAD2L2Q9UI95 211 aa16.04■□□□□ 0.16
RAB40B-204ENST00000571554 PNMA2Q9UL42 364 aa16.04■□□□□ 0.16
RAB40B-204ENST00000571554 KLRF2D3W0D1 207 aa16.03■□□□□ 0.16
RAB40B-204ENST00000571554 CDK7P50613 346 aa16.03■□□□□ 0.16
RAB40B-204ENST00000571554 NKX3-2P78367 333 aa16.03■□□□□ 0.16
RAB40B-204ENST00000571554 DUSP28Q4G0W2 176 aa16.03■□□□□ 0.16
RAB40B-204ENST00000571554 HOMER1Q86YM7 354 aa16.03■□□□□ 0.16
RAB40B-204ENST00000571554 NCOA7Q8NI08 942 aa16.03■□□□□ 0.16
RAB40B-204ENST00000571554 PPP1R13LQ8WUF5 828 aa16.03■□□□□ 0.16
RAB40B-204ENST00000571554 MAP4K1Q92918 833 aa16.03■□□□□ 0.16
RAB40B-204ENST00000571554 FAM161BQ96MY7 647 aa16.03■□□□□ 0.16
RAB40B-204ENST00000571554 TAAR1Q96RJ0 339 aa16.03■□□□□ 0.16
RAB40B-204ENST00000571554 PPP1R12CQ9BZL4 782 aa16.03■□□□□ 0.16
RAB40B-204ENST00000571554 TBX21Q9UL17 535 aa16.03■□□□□ 0.16
RAB40B-204ENST00000571554 BAZ2BQ9UIF8 2168 aaKnown RBP16.03■□□□□ 0.16
RAB40B-204ENST00000571554 GRIN2DO15399 1336 aa16.02■□□□□ 0.16
RAB40B-204ENST00000571554 MROH7Q68CQ1 1323 aa16.02■□□□□ 0.16
RAB40B-204ENST00000571554 ERICH2A1L162 156 aa16.02■□□□□ 0.16
RAB40B-204ENST00000571554 PPP1R11O60927 126 aaPredicted RBP16.02■□□□□ 0.16
RAB40B-204ENST00000571554 MYL3P08590 195 aa16.02■□□□□ 0.16
RAB40B-204ENST00000571554 EDNRBP24530 442 aa16.02■□□□□ 0.16
RAB40B-204ENST00000571554 ANTXR2P58335 489 aa16.02■□□□□ 0.16
RAB40B-204ENST00000571554 FPGSQ05932 587 aa16.02■□□□□ 0.16
RAB40B-204ENST00000571554 ITGA7Q13683 1181 aa16.02■□□□□ 0.16
RAB40B-204ENST00000571554 COL9A3Q14050 684 aaPredicted RBP16.02■□□□□ 0.16
RAB40B-204ENST00000571554 WTAPQ15007 396 aa16.02■□□□□ 0.16
RAB40B-204ENST00000571554 SLC35G1Q2M3R5 365 aa16.02■□□□□ 0.16
RAB40B-204ENST00000571554 FAM126BQ8IXS8 530 aa16.02■□□□□ 0.16
RAB40B-204ENST00000571554 OR6J1Q8NGC5 347 aa16.02■□□□□ 0.16
RAB40B-204ENST00000571554 SYTL5Q8TDW5 730 aaPredicted RBP16.02■□□□□ 0.16
RAB40B-204ENST00000571554 PIBF1Q8WXW3 757 aa16.02■□□□□ 0.16
RAB40B-204ENST00000571554 GPHNQ9NQX3 736 aaPredicted RBP16.02■□□□□ 0.16
RAB40B-204ENST00000571554 PALM3A6NDB9 673 aaPredicted RBP16.01■□□□□ 0.15
RAB40B-204ENST00000571554 ZEB2O60315 1214 aa16.01■□□□□ 0.15
RAB40B-204ENST00000571554 ARIH2O95376 493 aa16.01■□□□□ 0.15
RAB40B-204ENST00000571554 CFBP00751 764 aa16.01■□□□□ 0.15
RAB40B-204ENST00000571554 TIMP1P01033 207 aa16.01■□□□□ 0.15
RAB40B-204ENST00000571554 GRM4Q14833 912 aa16.01■□□□□ 0.15
RAB40B-204ENST00000571554 PPP2R5BQ15173 497 aa16.01■□□□□ 0.15
RAB40B-204ENST00000571554 TMEM67Q5HYA8 995 aa16.01■□□□□ 0.15
RAB40B-204ENST00000571554 MB21D2Q8IYB1 491 aaPredicted RBP16.01■□□□□ 0.15
RAB40B-204ENST00000571554 DNERQ8NFT8 737 aa16.01■□□□□ 0.15
RAB40B-204ENST00000571554 MPHOSPH6Q99547 160 aaKnown RBP16.01■□□□□ 0.15
RAB40B-204ENST00000571554 MYL10Q9BUA6 226 aa16.01■□□□□ 0.15
RAB40B-204ENST00000571554 LSG1Q9H089 658 aaKnown RBP16.01■□□□□ 0.15
RAB40B-204ENST00000571554 MRPL11Q9Y3B7 192 aaKnown RBP16.01■□□□□ 0.15
RAB40B-204ENST00000571554 LOC102724159A0A0B4J2E5 919 aa16■□□□□ 0.15
RAB40B-204ENST00000571554 RBM47A0AV96 593 aaKnown RBP16■□□□□ 0.15
RAB40B-204ENST00000571554 OPLAHO14841 1288 aa16■□□□□ 0.15
RAB40B-204ENST00000571554 TLR3O15455 904 aaKnown RBP16■□□□□ 0.15
RAB40B-204ENST00000571554 TXNP10599 105 aaKnown RBP16■□□□□ 0.15
RAB40B-204ENST00000571554 EIF2AK2P19525 551 aaKnown RBP16■□□□□ 0.15
RAB40B-204ENST00000571554 PWP2Q15269 919 aaKnown RBP16■□□□□ 0.15
RAB40B-204ENST00000571554 SEPT14Q6ZU15 432 aa16■□□□□ 0.15
RAB40B-204ENST00000571554 MCF2L2Q86YR7 1114 aa16■□□□□ 0.15
RAB40B-204ENST00000571554 RGS22Q8NE09 1264 aa16■□□□□ 0.15
RAB40B-204ENST00000571554 RNPC3Q96LT9 517 aaKnown RBP16■□□□□ 0.15
RAB40B-204ENST00000571554 PIGSQ96S52 555 aa16■□□□□ 0.15
RAB40B-204ENST00000571554 RMDN3Q96TC7 470 aa16■□□□□ 0.15
RAB40B-204ENST00000571554 ESYT1Q9BSJ8 1104 aa16■□□□□ 0.15
RAB40B-204ENST00000571554 AMNQ9BXJ7 453 aa16■□□□□ 0.15
RAB40B-204ENST00000571554 TRPV6Q9H1D0 765 aa16■□□□□ 0.15
RAB40B-204ENST00000571554 Q9Y3F1 56 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms