RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 PCP11498 1178 aaKnown RBP17.39■□□□□ 0.37
NDE1-203ENST00000570727 DNAJB2P25686 324 aa17.39■□□□□ 0.37
NDE1-203ENST00000570727 ZNF365Q70YC5 407 aa17.39■□□□□ 0.37
NDE1-203ENST00000570727 CHD1LQ86WJ1 897 aa17.39■□□□□ 0.37
NDE1-203ENST00000570727 TMEM199Q8N511 208 aa17.39■□□□□ 0.37
NDE1-203ENST00000570727 MAFAQ8NHW3 353 aaPredicted RBP17.39■□□□□ 0.37
NDE1-203ENST00000570727 COL25A1Q9BXS0 654 aaPredicted RBP17.39■□□□□ 0.37
NDE1-203ENST00000570727 MYO9BQ13459 2157 aa17.39■□□□□ 0.37
NDE1-203ENST00000570727 ZEB2O60315 1214 aa17.38■□□□□ 0.37
NDE1-203ENST00000570727 PSMC6P62333 389 aa17.38■□□□□ 0.37
NDE1-203ENST00000570727 NUCB1Q02818 461 aa17.38■□□□□ 0.37
NDE1-203ENST00000570727 GRIN2CQ14957 1233 aa17.38■□□□□ 0.37
NDE1-203ENST00000570727 DUSP28Q4G0W2 176 aa17.38■□□□□ 0.37
NDE1-203ENST00000570727 SLC30A10Q6XR72 485 aa17.38■□□□□ 0.37
NDE1-203ENST00000570727 ZKSCAN3Q9BRR0 538 aa17.38■□□□□ 0.37
NDE1-203ENST00000570727 TRPV6Q9H1D0 765 aa17.38■□□□□ 0.37
NDE1-203ENST00000570727 ADD3Q9UEY8 706 aaKnown RBP17.38■□□□□ 0.37
NDE1-203ENST00000570727 UMODL1Q5DID0 1318 aa17.38■□□□□ 0.37
NDE1-203ENST00000570727 CHD7Q9P2D1 2997 aa17.37■□□□□ 0.37
NDE1-203ENST00000570727 LOC102724159A0A0B4J2E5 919 aa17.37■□□□□ 0.37
NDE1-203ENST00000570727 PTPDC1A2A3K4 754 aa17.37■□□□□ 0.37
NDE1-203ENST00000570727 GRXCR1A8MXD5 290 aa17.37■□□□□ 0.37
NDE1-203ENST00000570727 PWP2Q15269 919 aaKnown RBP17.37■□□□□ 0.37
NDE1-203ENST00000570727 SEZ6LQ9BYH1 1024 aa17.37■□□□□ 0.37
NDE1-203ENST00000570727 WDR11Q9BZH6 1224 aa17.37■□□□□ 0.37
NDE1-203ENST00000570727 RNF41Q9H4P4 317 aaPredicted RBP17.37■□□□□ 0.37
NDE1-203ENST00000570727 IL23AQ9NPF7 189 aa17.37■□□□□ 0.37
NDE1-203ENST00000570727 NEDD4P46934 1319 aa17.37■□□□□ 0.37
NDE1-203ENST00000570727 SPTBN5Q9NRC6 3674 aaKnown RBP17.37■□□□□ 0.37
NDE1-203ENST00000570727 ZNF213O14771 459 aa17.36■□□□□ 0.37
NDE1-203ENST00000570727 B4GALT4O60513 344 aa17.36■□□□□ 0.37
NDE1-203ENST00000570727 GOLGA8HP0CJ92 632 aa17.36■□□□□ 0.37
NDE1-203ENST00000570727 FOSL2P15408 326 aa17.36■□□□□ 0.37
NDE1-203ENST00000570727 CALML3P27482 149 aa17.36■□□□□ 0.37
NDE1-203ENST00000570727 PBX2P40425 430 aa17.36■□□□□ 0.37
NDE1-203ENST00000570727 MFAP1P55081 439 aaKnown RBP17.36■□□□□ 0.37
NDE1-203ENST00000570727 RPS6P62753 249 aaKnown RBP17.36■□□□□ 0.37
NDE1-203ENST00000570727 CWC27Q6UX04 472 aaKnown RBP17.36■□□□□ 0.37
NDE1-203ENST00000570727 RNF207Q6ZRF8 634 aa17.36■□□□□ 0.37
NDE1-203ENST00000570727 DGKHQ86XP1 1220 aa17.36■□□□□ 0.37
NDE1-203ENST00000570727 ESR2Q92731 530 aa17.36■□□□□ 0.37
NDE1-203ENST00000570727 TIFAQ96CG3 184 aa17.36■□□□□ 0.37
NDE1-203ENST00000570727 UBA5Q9GZZ9 404 aa17.36■□□□□ 0.37
NDE1-203ENST00000570727 CPVLQ9H3G5 476 aa17.36■□□□□ 0.37
NDE1-203ENST00000570727 HIPK3Q9H422 1215 aa17.36■□□□□ 0.37
NDE1-203ENST00000570727 ZNF576Q9H609 170 aa17.36■□□□□ 0.37
NDE1-203ENST00000570727 EDNRBP24530 442 aa17.35■□□□□ 0.37
NDE1-203ENST00000570727 EXOC6Q8TAG9 804 aa17.35■□□□□ 0.37
NDE1-203ENST00000570727 HERVK_113Q902F9 699 aa17.35■□□□□ 0.37
NDE1-203ENST00000570727 ANKS1AQ92625 1134 aa17.35■□□□□ 0.37
NDE1-203ENST00000570727 VWCEQ96DN2 955 aa17.35■□□□□ 0.37
NDE1-203ENST00000570727 NOC4LQ9BVI4 516 aaKnown RBP17.35■□□□□ 0.37
NDE1-203ENST00000570727 PBX4Q9BYU1 374 aa17.35■□□□□ 0.37
NDE1-203ENST00000570727 PNMA2Q9UL42 364 aa17.35■□□□□ 0.37
NDE1-203ENST00000570727 WDR19Q8NEZ3 1342 aa17.35■□□□□ 0.37
NDE1-203ENST00000570727 FGBP02675 491 aa17.34■□□□□ 0.37
NDE1-203ENST00000570727 CCL23P55773 120 aa17.34■□□□□ 0.37
NDE1-203ENST00000570727 PURAQ00577 322 aaKnown RBP17.34■□□□□ 0.37
NDE1-203ENST00000570727 LAMA4Q16363 1823 aa17.34■□□□□ 0.37
NDE1-203ENST00000570727 GPATCH4Q5T3I0 446 aaKnown RBP17.34■□□□□ 0.37
NDE1-203ENST00000570727 PSRC1Q6PGN9 363 aaPredicted RBP17.34■□□□□ 0.37
NDE1-203ENST00000570727 DNERQ8NFT8 737 aa17.34■□□□□ 0.37
NDE1-203ENST00000570727 TBC1D5Q92609 795 aa17.34■□□□□ 0.37
NDE1-203ENST00000570727 WNT8AQ9H1J5 351 aa17.34■□□□□ 0.37
NDE1-203ENST00000570727 ALDH8A1Q9H2A2 487 aaPredicted RBP17.34■□□□□ 0.37
NDE1-203ENST00000570727 CXXC1Q9P0U4 656 aaPredicted RBP17.34■□□□□ 0.37
NDE1-203ENST00000570727 KDM4AO75164 1064 aa17.33■□□□□ 0.36
NDE1-203ENST00000570727 PNMA1Q8ND90 353 aa17.33■□□□□ 0.36
NDE1-203ENST00000570727 RGS22Q8NE09 1264 aa17.33■□□□□ 0.36
NDE1-203ENST00000570727 POLR3EQ9NVU0 708 aa17.33■□□□□ 0.36
NDE1-203ENST00000570727 ZSWIM5Q9P217 1185 aa17.33■□□□□ 0.36
NDE1-203ENST00000570727 SCN10AQ9Y5Y9 1956 aa17.33■□□□□ 0.36
NDE1-203ENST00000570727 GBF1Q92538 1859 aa17.33■□□□□ 0.36
NDE1-203ENST00000570727 REV3LO60673 3130 aa17.32■□□□□ 0.36
NDE1-203ENST00000570727 B4E1Z4 1266 aa17.32■□□□□ 0.36
NDE1-203ENST00000570727 NT5C2P49902 561 aa17.32■□□□□ 0.36
NDE1-203ENST00000570727 PDE4DQ08499 809 aa17.32■□□□□ 0.36
NDE1-203ENST00000570727 USH1GQ495M9 461 aa17.32■□□□□ 0.36
NDE1-203ENST00000570727 OR6J1Q8NGC5 347 aa17.32■□□□□ 0.36
NDE1-203ENST00000570727 COPS5Q92905 334 aa17.32■□□□□ 0.36
NDE1-203ENST00000570727 YTHDC1Q96MU7 727 aaKnown RBP17.32■□□□□ 0.36
NDE1-203ENST00000570727 DSCC1Q9BVC3 393 aa17.32■□□□□ 0.36
NDE1-203ENST00000570727 DIAPH3Q9NSV4 1193 aa17.32■□□□□ 0.36
NDE1-203ENST00000570727 MYH6P13533 1939 aa17.31■□□□□ 0.36
NDE1-203ENST00000570727 MYL3P08590 195 aa17.31■□□□□ 0.36
NDE1-203ENST00000570727 CYP2C9P11712 490 aa17.31■□□□□ 0.36
NDE1-203ENST00000570727 CPT1AP50416 773 aa17.31■□□□□ 0.36
NDE1-203ENST00000570727 CCDC178Q5BJE1 867 aa17.31■□□□□ 0.36
NDE1-203ENST00000570727 OTOP2Q7RTS6 562 aa17.31■□□□□ 0.36
NDE1-203ENST00000570727 IQCA1Q86XH1 822 aa17.31■□□□□ 0.36
NDE1-203ENST00000570727 ADGRF4Q8IZF3 695 aa17.31■□□□□ 0.36
NDE1-203ENST00000570727 ENAHQ8N8S7 591 aaPredicted RBP17.31■□□□□ 0.36
NDE1-203ENST00000570727 USP38Q8NB14 1042 aa17.31■□□□□ 0.36
NDE1-203ENST00000570727 SCLYQ96I15 445 aa17.31■□□□□ 0.36
NDE1-203ENST00000570727 ZSCAN10Q96SZ4 725 aaPredicted RBP17.31■□□□□ 0.36
NDE1-203ENST00000570727 MTG1Q9BT17 334 aaPredicted RBP17.31■□□□□ 0.36
NDE1-203ENST00000570727 TRMT13Q9NUP7 481 aaKnown RBP17.31■□□□□ 0.36
NDE1-203ENST00000570727 SCN5AQ14524 2016 aa17.3■□□□□ 0.36
NDE1-203ENST00000570727 A6NJR5 290 aa17.3■□□□□ 0.36
NDE1-203ENST00000570727 HIP1O00291 1037 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms