RNA–Protein interactions for RNA: ENST00000569957.5

INO80E-213, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 4,469 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-213ENST00000569957 USP49Q70CQ1 688 aa13.96□□□□□ -0.18
INO80E-213ENST00000569957 MYOCDQ8IZQ8 938 aa13.96□□□□□ -0.18
INO80E-213ENST00000569957 SFI1A8K8P3 1242 aa13.95□□□□□ -0.18
INO80E-213ENST00000569957 GTPBP6O43824 516 aaPredicted RBP13.95□□□□□ -0.18
INO80E-213ENST00000569957 ZBED4O75132 1171 aa13.95□□□□□ -0.18
INO80E-213ENST00000569957 FAM26FQ5R3K3 315 aa13.95□□□□□ -0.18
INO80E-213ENST00000569957 SPATA1Q5VX52 437 aa13.95□□□□□ -0.18
INO80E-213ENST00000569957 TMTC3Q6ZXV5 915 aa13.95□□□□□ -0.18
INO80E-213ENST00000569957 PRPF3O43395 683 aaKnown RBP13.95□□□□□ -0.18
INO80E-213ENST00000569957 SLFN14P0C7P3 912 aa13.95□□□□□ -0.18
INO80E-213ENST00000569957 EXOSC10Q01780 885 aaKnown RBP13.95□□□□□ -0.18
INO80E-213ENST00000569957 ZSCAN26Q16670 478 aa13.95□□□□□ -0.18
INO80E-213ENST00000569957 B4GALNT4Q76KP1 1039 aa13.95□□□□□ -0.18
INO80E-213ENST00000569957 CCDC50Q8IVM0 306 aa13.95□□□□□ -0.18
INO80E-213ENST00000569957 OR8K1Q8NGG5 319 aa13.95□□□□□ -0.18
INO80E-213ENST00000569957 EFCC1Q9HA90 598 aa13.95□□□□□ -0.18
INO80E-213ENST00000569957 POTEMA6NI47 508 aa13.95□□□□□ -0.18
INO80E-213ENST00000569957 NOP56O00567 594 aaKnown RBP13.95□□□□□ -0.18
INO80E-213ENST00000569957 SMC1AQ14683 1233 aaKnown RBP13.95□□□□□ -0.18
INO80E-213ENST00000569957 SF3B3Q15393 1217 aaKnown RBP13.95□□□□□ -0.18
INO80E-213ENST00000569957 ARFGAP2Q8N6H7 521 aa13.95□□□□□ -0.18
INO80E-213ENST00000569957 MRFAP1L1Q96HT8 127 aa13.95□□□□□ -0.18
INO80E-213ENST00000569957 ZNF277Q9NRM2 450 aaPredicted RBP13.95□□□□□ -0.18
INO80E-213ENST00000569957 TMEM260Q9NX78 707 aa13.95□□□□□ -0.18
INO80E-213ENST00000569957 ENC1O14682 589 aa13.94□□□□□ -0.18
INO80E-213ENST00000569957 NTSR2O95665 410 aa13.94□□□□□ -0.18
INO80E-213ENST00000569957 CCDC172P0C7W6 258 aa13.94□□□□□ -0.18
INO80E-213ENST00000569957 ANTXR2P58335 489 aa13.94□□□□□ -0.18
INO80E-213ENST00000569957 TXNRD3Q86VQ6 643 aa13.94□□□□□ -0.18
INO80E-213ENST00000569957 SUGCTQ9HAC7 445 aa13.94□□□□□ -0.18
INO80E-213ENST00000569957 EPB41L4AQ9HCS5 686 aaPredicted RBP13.94□□□□□ -0.18
INO80E-213ENST00000569957 PANK4Q9NVE7 773 aa13.94□□□□□ -0.18
INO80E-213ENST00000569957 IMPACTQ9P2X3 320 aa13.94□□□□□ -0.18
INO80E-213ENST00000569957 BUB1O43683 1085 aa13.94□□□□□ -0.18
INO80E-213ENST00000569957 PCP11498 1178 aaKnown RBP13.94□□□□□ -0.18
INO80E-213ENST00000569957 PLCG1P19174 1290 aa13.94□□□□□ -0.18
INO80E-213ENST00000569957 TMTC1Q8IUR5 882 aa13.94□□□□□ -0.18
INO80E-213ENST00000569957 GLG1Q92896 1179 aa13.94□□□□□ -0.18
INO80E-213ENST00000569957 NSUN4Q96CB9 384 aaKnown RBP13.94□□□□□ -0.18
INO80E-213ENST00000569957 NAPGQ99747 312 aaPredicted RBP13.94□□□□□ -0.18
INO80E-213ENST00000569957 KANSL2Q9H9L4 492 aa13.94□□□□□ -0.18
INO80E-213ENST00000569957 SMCR8Q8TEV9 937 aaPredicted RBP13.94□□□□□ -0.18
INO80E-213ENST00000569957 PI4KBQ9UBF8 816 aa13.94□□□□□ -0.18
INO80E-213ENST00000569957 GCOM1H8Y6P7 765 aaPredicted RBP13.94□□□□□ -0.18
INO80E-213ENST00000569957 CLIC2O15247 247 aa13.94□□□□□ -0.18
INO80E-213ENST00000569957 POLR2MP0CAP2 368 aa13.94□□□□□ -0.18
INO80E-213ENST00000569957 PRR5LQ6MZQ0 368 aa13.94□□□□□ -0.18
INO80E-213ENST00000569957 MIER3Q7Z3K6 550 aa13.94□□□□□ -0.18
INO80E-213ENST00000569957 NLRX1Q86UT6 975 aa13.94□□□□□ -0.18
INO80E-213ENST00000569957 BRIP1Q9BX63 1249 aa13.94□□□□□ -0.18
INO80E-213ENST00000569957 TNFAIP3P21580 790 aa13.93□□□□□ -0.18
INO80E-213ENST00000569957 USP37Q86T82 979 aa13.93□□□□□ -0.18
INO80E-213ENST00000569957 KLHL7Q8IXQ5 586 aa13.93□□□□□ -0.18
INO80E-213ENST00000569957 PPP2R2CQ9Y2T4 447 aa13.93□□□□□ -0.18
INO80E-213ENST00000569957 PDE4DIPQ5VU43 2346 aa13.93□□□□□ -0.18
INO80E-213ENST00000569957 NPR1P16066 1061 aa13.93□□□□□ -0.18
INO80E-213ENST00000569957 SMTNP53814 917 aa13.93□□□□□ -0.18
INO80E-213ENST00000569957 POLR2FP61218 127 aaKnown RBP13.93□□□□□ -0.18
INO80E-213ENST00000569957 SLC9C1Q4G0N8 1177 aa13.93□□□□□ -0.18
INO80E-213ENST00000569957 ADAT2Q7Z6V5 191 aaKnown RBP13.93□□□□□ -0.18
INO80E-213ENST00000569957 CCDC17Q96LX7 622 aa13.93□□□□□ -0.18
INO80E-213ENST00000569957 TUBGCP2Q9BSJ2 902 aa13.93□□□□□ -0.18
INO80E-213ENST00000569957 IFIH1Q9BYX4 1025 aaKnown RBP13.93□□□□□ -0.18
INO80E-213ENST00000569957 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.93□□□□□ -0.18
INO80E-213ENST00000569957 BMP3P12645 472 aa13.93□□□□□ -0.18
INO80E-213ENST00000569957 CRKP46108 304 aa13.93□□□□□ -0.18
INO80E-213ENST00000569957 MKRN3Q13064 507 aaKnown RBP13.93□□□□□ -0.18
INO80E-213ENST00000569957 ADAM9Q13443 819 aa13.93□□□□□ -0.18
INO80E-213ENST00000569957 XKR9Q5GH70 373 aa13.93□□□□□ -0.18
INO80E-213ENST00000569957 GPATCH4Q5T3I0 446 aaKnown RBP13.93□□□□□ -0.18
INO80E-213ENST00000569957 FAM102BQ5T8I3 360 aa13.93□□□□□ -0.18
INO80E-213ENST00000569957 FAM178BQ8IXR5 827 aa13.93□□□□□ -0.18
INO80E-213ENST00000569957 LARP4BQ92615 738 aaKnown RBP13.93□□□□□ -0.18
INO80E-213ENST00000569957 SRPRBQ9Y5M8 271 aaKnown RBP13.93□□□□□ -0.18
INO80E-213ENST00000569957 ZEB2O60315 1214 aa13.92□□□□□ -0.18
INO80E-213ENST00000569957 MAP2K2P36507 400 aa13.92□□□□□ -0.18
INO80E-213ENST00000569957 LONP1P36776 959 aaKnown RBP13.92□□□□□ -0.18
INO80E-213ENST00000569957 ETF1P62495 437 aaKnown RBP13.92□□□□□ -0.18
INO80E-213ENST00000569957 CUL4BQ13620 913 aa13.92□□□□□ -0.18
INO80E-213ENST00000569957 IFI16Q16666 785 aaKnown RBP13.92□□□□□ -0.18
INO80E-213ENST00000569957 DGKHQ86XP1 1220 aa13.92□□□□□ -0.18
INO80E-213ENST00000569957 RSRC1Q96IZ7 334 aaKnown RBP13.92□□□□□ -0.18
INO80E-213ENST00000569957 LSM14BQ9BX40 385 aaKnown RBP13.92□□□□□ -0.18
INO80E-213ENST00000569957 COA1Q9GZY4 146 aa13.92□□□□□ -0.18
INO80E-213ENST00000569957 GLT8D2Q9H1C3 349 aa13.92□□□□□ -0.18
INO80E-213ENST00000569957 ZBTB12Q9Y330 459 aaPredicted RBP13.92□□□□□ -0.18
INO80E-213ENST00000569957 ATP6V0A2Q9Y487 856 aa13.92□□□□□ -0.18
INO80E-213ENST00000569957 TRIM49BA6NDI0 452 aa13.92□□□□□ -0.18
INO80E-213ENST00000569957 USP17L10C9JJH3 530 aa13.92□□□□□ -0.18
INO80E-213ENST00000569957 ARHGEF16Q5VV41 709 aa13.92□□□□□ -0.18
INO80E-213ENST00000569957 ANKRD35Q8N283 1001 aa13.92□□□□□ -0.18
INO80E-213ENST00000569957 SELENOOQ9BVL4 669 aa13.92□□□□□ -0.18
INO80E-213ENST00000569957 PRR29P0C7W0 189 aa13.92□□□□□ -0.18
INO80E-213ENST00000569957 DESP17661 470 aa13.92□□□□□ -0.18
INO80E-213ENST00000569957 COPB1P53618 953 aaKnown RBP13.92□□□□□ -0.18
INO80E-213ENST00000569957 CASP7P55210 303 aa13.92□□□□□ -0.18
INO80E-213ENST00000569957 CCDC84Q86UT8 332 aaPredicted RBP13.92□□□□□ -0.18
INO80E-213ENST00000569957 HOOK3Q86VS8 718 aa13.92□□□□□ -0.18
INO80E-213ENST00000569957 SRBD1Q8N5C6 995 aaKnown RBP13.92□□□□□ -0.18
INO80E-213ENST00000569957 FAM76AQ8TAV0 307 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms