RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 HOOK2Q96ED9 719 aa4.05□□□□□ -1.76
CNOT1-221ENST00000569924 ABHD17AQ96GS6 310 aa4.05□□□□□ -1.76
CNOT1-221ENST00000569924 SMAD5Q99717 465 aaKnown RBP4.05□□□□□ -1.76
CNOT1-221ENST00000569924 YIPF4Q9BSR8 244 aa4.05□□□□□ -1.76
CNOT1-221ENST00000569924 RTFDC1Q9BY42 306 aaPredicted RBP4.05□□□□□ -1.76
CNOT1-221ENST00000569924 CCDC8Q9H0W5 538 aaPredicted RBP4.05□□□□□ -1.76
CNOT1-221ENST00000569924 IGFLR1Q9H665 355 aa4.05□□□□□ -1.76
CNOT1-221ENST00000569924 SOX17Q9H6I2 414 aaPredicted RBP4.05□□□□□ -1.76
CNOT1-221ENST00000569924 TRIM39Q9HCM9 518 aa4.05□□□□□ -1.76
CNOT1-221ENST00000569924 ENAMQ9NRM1 1142 aa4.05□□□□□ -1.76
CNOT1-221ENST00000569924 LRRC4BQ9NT99 713 aa4.05□□□□□ -1.76
CNOT1-221ENST00000569924 TERF2IPQ9NYB0 399 aa4.05□□□□□ -1.76
CNOT1-221ENST00000569924 LRP2BPQ9P2M1 347 aa4.05□□□□□ -1.76
CNOT1-221ENST00000569924 SUSD2Q9UGT4 822 aa4.05□□□□□ -1.76
CNOT1-221ENST00000569924 DNMT3LQ9UJW3 386 aa4.05□□□□□ -1.76
CNOT1-221ENST00000569924 UNC79Q9P2D8 2635 aa4.05□□□□□ -1.76
CNOT1-221ENST00000569924 LY75O60449 1722 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 ANKRD36BQ8N2N9 1353 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 PNPLA7Q6ZV29 1317 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 PRODHO43272 600 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 EFCAB14O75071 495 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 ASLP04424 464 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 CYP11A1P05108 521 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 ITGAVP06756 1048 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 HMGB2P26583 209 aaKnown RBP4.04□□□□□ -1.76
CNOT1-221ENST00000569924 POLD1P28340 1107 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 CABP4P57796 275 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 ZRSR2Q15696 482 aaKnown RBP4.04□□□□□ -1.76
CNOT1-221ENST00000569924 GPR162Q16538 588 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 DBN1Q16643 649 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 PKN3Q6P5Z2 889 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 FAM35AQ86V20 835 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 MAGEB6Q8N7X4 407 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 LRRN4CLQ8ND94 238 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 SLC7A14Q8TBB6 771 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 PNISRQ8TF01 805 aaKnown RBP4.04□□□□□ -1.76
CNOT1-221ENST00000569924 SLC7A3Q8WY07 619 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 OSBP2Q969R2 916 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 ELMO3Q96BJ8 720 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 SIN3AQ96ST3 1273 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 CARD11Q9BXL7 1154 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 TRIM8Q9BZR9 551 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 UBE2OQ9C0C9 1292 aaKnown RBP4.04□□□□□ -1.76
CNOT1-221ENST00000569924 ZC3H12CQ9C0D7 883 aaKnown RBP4.04□□□□□ -1.76
CNOT1-221ENST00000569924 LACRTQ9GZZ8 138 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 SLC12A5Q9H2X9 1139 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 SH2B1Q9NRF2 756 aaPredicted RBP4.04□□□□□ -1.76
CNOT1-221ENST00000569924 KLHL3Q9UH77 587 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 SFMBT1Q9UHJ3 866 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 ZNF180Q9UJW8 692 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 ATXN7L1Q9ULK2 861 aaPredicted RBP4.04□□□□□ -1.76
CNOT1-221ENST00000569924 NOB1Q9ULX3 412 aaKnown RBP4.04□□□□□ -1.76
CNOT1-221ENST00000569924 TRIM33Q9UPN9 1127 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 TNPO3Q9Y5L0 923 aaKnown RBP4.04□□□□□ -1.76
CNOT1-221ENST00000569924 TUBGCP6Q96RT7 1819 aa4.04□□□□□ -1.76
CNOT1-221ENST00000569924 A0A1W2PP64 1363 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 RTL1A6NKG5 1358 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 NSD2O96028 1365 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 CGNL1Q0VF96 1302 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 MAP3K19Q56UN5 1328 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 CCDC189A1A4V9 331 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 GABRDO14764 452 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 ZEB2O60315 1214 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 ABLIM3O94929 683 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 PGRP06401 933 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 EPHX1P07099 455 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 C6orf222P0C671 652 aaPredicted RBP4.03□□□□□ -1.76
CNOT1-221ENST00000569924 CPB1P15086 417 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 ZSCAN20P17040 1043 aaPredicted RBP4.03□□□□□ -1.76
CNOT1-221ENST00000569924 CDC27P30260 824 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 POLR2BP30876 1174 aaKnown RBP4.03□□□□□ -1.76
CNOT1-221ENST00000569924 GRK4P32298 578 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 GABREP78334 506 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 HNRNPUQ00839 825 aaKnown RBP eCLIP4.03□□□□□ -1.76
CNOT1-221ENST00000569924 GSTM4Q03013 218 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 POU4F3Q15319 338 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 SYDE2Q5VT97 1194 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 HEATR6Q6AI08 1181 aaKnown RBP4.03□□□□□ -1.76
CNOT1-221ENST00000569924 PPFIBP1Q86W92 1011 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 DGKHQ86XP1 1220 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 SLFN12Q8IYM2 578 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 TRIM22Q8IYM9 498 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 CACTIN-AS1Q8N1I8 211 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 CNTD1Q8N815 330 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 GSTCDQ8NEC7 633 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 SMARCC1Q92922 1105 aaPredicted RBP4.03□□□□□ -1.76
CNOT1-221ENST00000569924 ACSF2Q96CM8 615 aaPredicted RBP4.03□□□□□ -1.76
CNOT1-221ENST00000569924 GMCL1Q96IK5 515 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 TTC1Q99614 292 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 ARPC5LQ9BPX5 153 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 CORO1BQ9BR76 489 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 SMG9Q9H0W8 520 aaKnown RBP4.03□□□□□ -1.76
CNOT1-221ENST00000569924 CCDC86Q9H6F5 360 aaKnown RBP4.03□□□□□ -1.76
CNOT1-221ENST00000569924 SLC52A2Q9HAB3 445 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 AVENQ9NQS1 362 aaPredicted RBP4.03□□□□□ -1.76
CNOT1-221ENST00000569924 GNL3LQ9NVN8 582 aaKnown RBP4.03□□□□□ -1.76
CNOT1-221ENST00000569924 TFCP2L1Q9NZI6 479 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 SUCOQ9UBS9 1254 aaKnown RBP4.03□□□□□ -1.76
CNOT1-221ENST00000569924 TRHDEQ9UKU6 1024 aa4.03□□□□□ -1.76
CNOT1-221ENST00000569924 DOT1LQ8TEK3 1739 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms