RNA–Protein interactions for RNA: ENST00000569784.1

SCAPER-223, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 580 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-223	ENST00000569784	SH3RF1	Q7Z6J0	888 aa		10.05	□□□□□ -0.8
SCAPER-223	ENST00000569784	CCDC144CP	Q8IYA2	1237 aa		10.05	□□□□□ -0.8
SCAPER-223	ENST00000569784	DCAF4	Q8WV16	495 aa		10.05	□□□□□ -0.8
SCAPER-223	ENST00000569784	RNF41	Q9H4P4	317 aa	Predicted RBP	10.05	□□□□□ -0.8
SCAPER-223	ENST00000569784	GPCPD1	Q9NPB8	672 aa		10.05	□□□□□ -0.8
SCAPER-223	ENST00000569784	DIAPH3	Q9NSV4	1193 aa		10.05	□□□□□ -0.8
SCAPER-223	ENST00000569784	MTMR10	Q9NXD2	777 aa		10.05	□□□□□ -0.8
SCAPER-223	ENST00000569784	ADD3	Q9UEY8	706 aa	Known RBP	10.05	□□□□□ -0.8
SCAPER-223	ENST00000569784	DNAJC25-GNG10	A0A024R161	153 aa		10.04	□□□□□ -0.8
SCAPER-223	ENST00000569784		A0A0U1RQG5	324 aa	Predicted RBP	10.04	□□□□□ -0.8
SCAPER-223	ENST00000569784		B4DLN1	442 aa		10.04	□□□□□ -0.8
SCAPER-223	ENST00000569784	DHX16	O60231	1041 aa	Known RBP	10.04	□□□□□ -0.8
SCAPER-223	ENST00000569784	NMT2	O60551	498 aa		10.04	□□□□□ -0.8
SCAPER-223	ENST00000569784	IGHA2	P01877	340 aa		10.04	□□□□□ -0.8
SCAPER-223	ENST00000569784	TOP1	P11387	765 aa	Known RBP	10.04	□□□□□ -0.8
SCAPER-223	ENST00000569784	MRPL12	P52815	198 aa	Known RBP	10.04	□□□□□ -0.8
SCAPER-223	ENST00000569784	HAND2	P61296	217 aa		10.04	□□□□□ -0.8
SCAPER-223	ENST00000569784	CNTN2	Q02246	1040 aa		10.04	□□□□□ -0.8
SCAPER-223	ENST00000569784	AAMP	Q13685	434 aa		10.04	□□□□□ -0.8
SCAPER-223	ENST00000569784	SNX17	Q15036	470 aa		10.04	□□□□□ -0.8
SCAPER-223	ENST00000569784	C1orf53	Q5VUE5	145 aa		10.04	□□□□□ -0.8
SCAPER-223	ENST00000569784	EEPD1	Q7L9B9	569 aa		10.04	□□□□□ -0.8
SCAPER-223	ENST00000569784	TMEM199	Q8N511	208 aa		10.04	□□□□□ -0.8
SCAPER-223	ENST00000569784	INCENP	Q9NQS7	918 aa		10.04	□□□□□ -0.8
SCAPER-223	ENST00000569784	PRR12	Q9ULL5	1215 aa		10.04	□□□□□ -0.8
SCAPER-223	ENST00000569784	MCM3AP	O60318	1980 aa		10.04	□□□□□ -0.8
SCAPER-223	ENST00000569784	FRMPD2	Q68DX3	1309 aa	Predicted RBP	10.04	□□□□□ -0.8
SCAPER-223	ENST00000569784	TRIM43B	A6NCK2	446 aa		10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784	ZNF213	O14771	459 aa		10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784	GPR37	O15354	613 aa		10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784	DYNC1LI2	O43237	492 aa	Predicted RBP	10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784	ADAMTS4	O75173	837 aa		10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784	SLC16A2	P36021	539 aa		10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784	LSM11	P83369	360 aa	Known RBP eCLIP	10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784	NMI	Q13287	307 aa	Predicted RBP	10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784	PPIG	Q13427	754 aa	Known RBP eCLIP	10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784	HDAC1	Q13547	482 aa	Predicted RBP	10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784	PROX2	Q3B8N5	592 aa		10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784	BRDT	Q58F21	947 aa	Predicted RBP	10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784	C9orf50	Q5SZB4	431 aa		10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784	VPS53	Q5VIR6	699 aa		10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784	SYDE2	Q5VT97	1194 aa		10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784	KIAA1211	Q6ZU35	1233 aa		10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784	TLK2	Q86UE8	772 aa		10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784	ESR2	Q92731	530 aa		10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784	TRIM43	Q96BQ3	446 aa	Predicted RBP	10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784	FAM227B	Q96M60	508 aa		10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784	ZBED2	Q9BTP6	218 aa		10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784	PPP1R12C	Q9BZL4	782 aa		10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784	MTIF3	Q9H2K0	278 aa	Known RBP	10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784	A1CF	Q9NQ94	594 aa	Known RBP	10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784	PNMA2	Q9UL42	364 aa		10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784	ELP1	O95163	1332 aa		10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784	CCDC171	Q6TFL3	1326 aa		10.03	□□□□□ -0.8
SCAPER-223	ENST00000569784		A0A0D9SFI3	127 aa		10.02	□□□□□ -0.81
SCAPER-223	ENST00000569784	PPP1R3G	B7ZBB8	358 aa		10.02	□□□□□ -0.81
SCAPER-223	ENST00000569784	HIP1	O00291	1037 aa		10.02	□□□□□ -0.81
SCAPER-223	ENST00000569784	ORC4	O43929	436 aa		10.02	□□□□□ -0.81
SCAPER-223	ENST00000569784	PLA2G6	O60733	806 aa		10.02	□□□□□ -0.81
SCAPER-223	ENST00000569784	CABYR	O75952	493 aa		10.02	□□□□□ -0.81
SCAPER-223	ENST00000569784	FGA	P02671	866 aa		10.02	□□□□□ -0.81
SCAPER-223	ENST00000569784	ICAM1	P05362	532 aa		10.02	□□□□□ -0.81
SCAPER-223	ENST00000569784	HSPD1	P10809	573 aa	Known RBP	10.02	□□□□□ -0.81
SCAPER-223	ENST00000569784	CALML3	P27482	149 aa		10.02	□□□□□ -0.81
SCAPER-223	ENST00000569784	GJA9	P57773	515 aa		10.02	□□□□□ -0.81
SCAPER-223	ENST00000569784	BEX3	Q00994	111 aa		10.02	□□□□□ -0.81
SCAPER-223	ENST00000569784	PTGDR	Q13258	359 aa		10.02	□□□□□ -0.81
SCAPER-223	ENST00000569784	CCDC178	Q5BJE1	867 aa		10.02	□□□□□ -0.81
SCAPER-223	ENST00000569784	AKNAD1	Q5T1N1	836 aa		10.02	□□□□□ -0.81
SCAPER-223	ENST00000569784	FAM109B	Q6ICB4	259 aa	Predicted RBP	10.02	□□□□□ -0.81
SCAPER-223	ENST00000569784	IQCA1	Q86XH1	822 aa		10.02	□□□□□ -0.81
SCAPER-223	ENST00000569784	TOX2	Q96NM4	488 aa		10.02	□□□□□ -0.81
SCAPER-223	ENST00000569784	IL17RB	Q9NRM6	502 aa		10.02	□□□□□ -0.81
SCAPER-223	ENST00000569784	ANAPC4	Q9UJX5	808 aa		10.02	□□□□□ -0.81
SCAPER-223	ENST00000569784	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	10.02	□□□□□ -0.81
SCAPER-223	ENST00000569784	RAD50	Q92878	1312 aa		10.02	□□□□□ -0.81
SCAPER-223	ENST00000569784	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	MYADML2	A6NDP7	307 aa		10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	SOWAHB	A6NEL2	793 aa		10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	ARVCF	O00192	962 aa		10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	KIAA0355	O15063	1070 aa		10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	TIMP1	P01033	207 aa		10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	PC	P11498	1178 aa	Known RBP	10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	FOSL2	P15408	326 aa		10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	CST5	P28325	142 aa	Predicted RBP	10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	CHMP4BP1	P59074	171 aa		10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	SMAD3	P84022	425 aa	Known RBP	10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	PDE4D	Q08499	809 aa		10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	FAAP100	Q0VG06	881 aa		10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	ALX1	Q15699	326 aa		10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	FSCN1	Q16658	493 aa	Known RBP	10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	MUM1L1	Q5H9M0	696 aa		10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	IQSEC1	Q6DN90	963 aa		10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	CWC27	Q6UX04	472 aa	Known RBP	10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	CXCL17	Q6UXB2	119 aa		10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	RNF207	Q6ZRF8	634 aa		10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	ANKRD33	Q7Z3H0	272 aa		10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	CHD1L	Q86WJ1	897 aa		10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	FBXO16	Q8IX29	292 aa	Predicted RBP	10.01	□□□□□ -0.81

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