RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 MCM7P33993 719 aa8.69□□□□□ -1.02
CDH13-214ENST00000569455 TM4SF4P48230 202 aa8.69□□□□□ -1.02
CDH13-214ENST00000569455 GTF2A2P52657 109 aa8.69□□□□□ -1.02
CDH13-214ENST00000569455 ATP2C1P98194 919 aaPredicted RBP8.69□□□□□ -1.02
CDH13-214ENST00000569455 AP3B2Q13367 1082 aa8.69□□□□□ -1.02
CDH13-214ENST00000569455 PRKG1Q13976 671 aa8.69□□□□□ -1.02
CDH13-214ENST00000569455 JAKMIP3Q5VZ66 844 aa8.69□□□□□ -1.02
CDH13-214ENST00000569455 ARL6IP4Q66PJ3 421 aaKnown RBP8.69□□□□□ -1.02
CDH13-214ENST00000569455 RASAL3Q86YV0 1011 aa8.69□□□□□ -1.02
CDH13-214ENST00000569455 WNK4Q96J92 1243 aa8.69□□□□□ -1.02
CDH13-214ENST00000569455 TNMDQ9H2S6 317 aa8.69□□□□□ -1.02
CDH13-214ENST00000569455 CLSTN2Q9H4D0 955 aa8.69□□□□□ -1.02
CDH13-214ENST00000569455 EMILIN3Q9NT22 766 aa8.69□□□□□ -1.02
CDH13-214ENST00000569455 SAGE1Q9NXZ1 904 aa8.69□□□□□ -1.02
CDH13-214ENST00000569455 FBXO2Q9UK22 296 aaPredicted RBP8.69□□□□□ -1.02
CDH13-214ENST00000569455 MRPL11Q9Y3B7 192 aaKnown RBP8.69□□□□□ -1.02
CDH13-214ENST00000569455 SRPRBQ9Y5M8 271 aaKnown RBP8.69□□□□□ -1.02
CDH13-214ENST00000569455 SNCAIPQ9Y6H5 919 aa8.69□□□□□ -1.02
CDH13-214ENST00000569455 MYH7BA7E2Y1 1941 aa8.69□□□□□ -1.02
CDH13-214ENST00000569455 PTPRFP10586 1907 aa8.69□□□□□ -1.02
CDH13-214ENST00000569455 ABCB11O95342 1321 aa8.69□□□□□ -1.02
CDH13-214ENST00000569455 A0A1B0GVL5 298 aa8.68□□□□□ -1.02
CDH13-214ENST00000569455 TESPA1A2RU30 521 aaPredicted RBP8.68□□□□□ -1.02
CDH13-214ENST00000569455 SPDYE3A6NKU9 549 aa8.68□□□□□ -1.02
CDH13-214ENST00000569455 ZBED4O75132 1171 aa8.68□□□□□ -1.02
CDH13-214ENST00000569455 NR1I2O75469 434 aa8.68□□□□□ -1.02
CDH13-214ENST00000569455 FLOT1O75955 427 aa8.68□□□□□ -1.02
CDH13-214ENST00000569455 ALDH1A1P00352 501 aa8.68□□□□□ -1.02
CDH13-214ENST00000569455 CETPP11597 493 aa8.68□□□□□ -1.02
CDH13-214ENST00000569455 CLK2P49760 499 aaKnown RBP8.68□□□□□ -1.02
CDH13-214ENST00000569455 PTGDRQ13258 359 aa8.68□□□□□ -1.02
CDH13-214ENST00000569455 SNAPC2Q13487 334 aa8.68□□□□□ -1.02
CDH13-214ENST00000569455 USH1GQ495M9 461 aa8.68□□□□□ -1.02
CDH13-214ENST00000569455 NOM1Q5C9Z4 860 aaKnown RBP8.68□□□□□ -1.02
CDH13-214ENST00000569455 L1TD1Q5T7N2 865 aaKnown RBP8.68□□□□□ -1.02
CDH13-214ENST00000569455 RESP18Q5W5W9 173 aa8.68□□□□□ -1.02
CDH13-214ENST00000569455 CCDC174Q6PII3 467 aa8.68□□□□□ -1.02
CDH13-214ENST00000569455 SAMD1Q6SPF0 538 aaPredicted RBP8.68□□□□□ -1.02
CDH13-214ENST00000569455 LRSAM1Q6UWE0 723 aa8.68□□□□□ -1.02
CDH13-214ENST00000569455 MOB2Q70IA6 237 aa8.68□□□□□ -1.02
CDH13-214ENST00000569455 CTU1Q7Z7A3 348 aaKnown RBP8.68□□□□□ -1.02
CDH13-214ENST00000569455 ENGASEQ8NFI3 743 aa8.68□□□□□ -1.02
CDH13-214ENST00000569455 TBCKQ8TEA7 893 aa8.68□□□□□ -1.02
CDH13-214ENST00000569455 OPTNQ96CV9 577 aa8.68□□□□□ -1.02
CDH13-214ENST00000569455 CCDC34Q96HJ3 373 aa8.68□□□□□ -1.02
CDH13-214ENST00000569455 PYM1Q9BRP8 204 aaKnown RBP8.68□□□□□ -1.02
CDH13-214ENST00000569455 RPAP3Q9H6T3 665 aaPredicted RBP8.68□□□□□ -1.02
CDH13-214ENST00000569455 EHMT1Q9H9B1 1298 aa8.68□□□□□ -1.02
CDH13-214ENST00000569455 TMEM260Q9NX78 707 aa8.68□□□□□ -1.02
CDH13-214ENST00000569455 KCNH4Q9UQ05 1017 aa8.68□□□□□ -1.02
CDH13-214ENST00000569455 AFG3L2Q9Y4W6 797 aa8.68□□□□□ -1.02
CDH13-214ENST00000569455 RBBP6Q7Z6E9 1792 aaKnown RBP8.68□□□□□ -1.02
CDH13-214ENST00000569455 FAM237AA0A1B0GTK4 181 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 SMCHD1A6NHR9 2005 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 PIK3CDO00329 1044 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 ADAMTS3O15072 1205 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 CCNT1O60563 726 aaKnown RBP8.67□□□□□ -1.02
CDH13-214ENST00000569455 ICAM1P05362 532 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 PFKFB1P16118 471 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 GCFC2P16383 781 aaKnown RBP8.67□□□□□ -1.02
CDH13-214ENST00000569455 TXLNAP40222 546 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 PRPHP41219 470 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 SYKP43405 635 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 HMGCS2P54868 508 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 SNAP25P60880 206 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 UBE2SQ16763 222 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 LETM2Q2VYF4 491 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 SH3D19Q5HYK7 790 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 SHC4Q6S5L8 630 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 FASTKD5Q7L8L6 764 aaKnown RBP8.67□□□□□ -1.02
CDH13-214ENST00000569455 FMR1NBQ8N0W7 255 aaPredicted RBP8.67□□□□□ -1.02
CDH13-214ENST00000569455 CLMNQ96JQ2 1002 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 TIGD1Q96MW7 591 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 SDF4Q9BRK5 362 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 CFHR5Q9BXR6 569 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 ANO3Q9BYT9 981 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 TSPY26PQ9H489 355 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 GOLPH3LQ9H4A5 285 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 ELP3Q9H9T3 547 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 FBXO28Q9NVF7 368 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 HOOK1Q9UJC3 728 aaKnown RBP8.67□□□□□ -1.02
CDH13-214ENST00000569455 KCNH3Q9ULD8 1083 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 CCPG1Q9ULG6 757 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 PPP1R9AQ9ULJ8 1098 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 FZD1Q9UP38 647 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 SLC45A1Q9Y2W3 748 aa8.67□□□□□ -1.02
CDH13-214ENST00000569455 LOC285556D6RIA3 1793 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 MYPNQ86TC9 1320 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 VWA3AA6NCI4 1184 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 USP17L15C9J2P7 530 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 USP17L13C9JLJ4 530 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 USP17L11C9JVI0 530 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 USP17L18D6R9N7 530 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 USP17L22D6RA61 530 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 USP17L17D6RBQ6 530 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 USP17L19D6RCP7 530 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 USP17L20D6RJB6 530 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 GCOM1H8Y6P7 765 aaPredicted RBP8.66□□□□□ -1.02
CDH13-214ENST00000569455 IRF6O14896 467 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 NEMFO60524 1076 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms