RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 SERPINA10Q9UK55 444 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 TSC22D4Q9Y3Q8 395 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 PRDM2Q13029 1718 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 CPP00450 1065 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 TMEM132EQ6IEE7 984 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 FRA10AC1Q70Z53 315 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 RRAGAQ7L523 313 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 CCT8L2Q96SF2 557 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 SMG5Q9UPR3 1016 aaKnown RBP7.73□□□□□ -1.17
CNOT1-216ENST00000569240 F6X3S4 739 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 EVA1CP58658 441 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 MAN2A1Q16706 1144 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 SYDE1Q6ZW31 735 aaPredicted RBP7.73□□□□□ -1.17
CNOT1-216ENST00000569240 UBE3BQ7Z3V4 1068 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 CXorf38Q8TB03 319 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 DESI2Q9BSY9 194 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 SENP3Q9H4L4 574 aaPredicted RBP7.73□□□□□ -1.17
CNOT1-216ENST00000569240 TAF1DQ9H5J8 278 aaPredicted RBP7.73□□□□□ -1.17
CNOT1-216ENST00000569240 C16orf96A6NNT2 1141 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 ECEL1O95672 775 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 MRPL12P52815 198 aaKnown RBP7.72□□□□□ -1.17
CNOT1-216ENST00000569240 ALKBH8Q96BT7 664 aaKnown RBP7.72□□□□□ -1.17
CNOT1-216ENST00000569240 NCOA3Q9Y6Q9 1424 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 ITIH6Q6UXX5 1313 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 TBKBP1A7MCY6 615 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 ATP5JP18859 108 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 ME3Q16798 604 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 RSBN1LQ6PCB5 846 aaPredicted RBP7.72□□□□□ -1.17
CNOT1-216ENST00000569240 RIBC1Q8N443 379 aaPredicted RBP7.72□□□□□ -1.17
CNOT1-216ENST00000569240 SLC40A1Q9NP59 571 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 ABCF3Q9NUQ8 709 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 CCDC87Q9NVE4 849 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 SYNGAP1Q96PV0 1343 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 IQANK1A0A1B0GTG1 560 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 PPIP5K2O43314 1243 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 HNRNPRO43390 633 aaKnown RBP7.72□□□□□ -1.17
CNOT1-216ENST00000569240 DAB1O75553 588 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 ATP5BP06576 529 aaKnown RBP7.72□□□□□ -1.17
CNOT1-216ENST00000569240 AOC3Q16853 763 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 WDR75Q8IWA0 830 aaKnown RBP7.72□□□□□ -1.17
CNOT1-216ENST00000569240 RHOT2Q8IXI1 618 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 CMTM5Q96DZ9 223 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 CCDC134Q9H6E4 229 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 SYBUQ9NX95 663 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 DKK3Q9UBP4 350 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 POLKQ9UBT6 870 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 BAG5Q9UL15 447 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 AP4S1Q9Y587 144 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 COPG1Q9Y678 874 aaKnown RBP7.72□□□□□ -1.17
CNOT1-216ENST00000569240 MYOM2P54296 1465 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 MAGI1Q96QZ7 1491 aaPredicted RBP7.72□□□□□ -1.17
CNOT1-216ENST00000569240 SBNO1A3KN83 1393 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 CCT8L1PA6NM43 557 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 E2F6O75461 281 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 TBC1D8O95759 1140 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 DHX34Q14147 1143 aaKnown RBP7.72□□□□□ -1.17
CNOT1-216ENST00000569240 PREPLQ4J6C6 727 aaPredicted RBP7.72□□□□□ -1.17
CNOT1-216ENST00000569240 KCTD16Q68DU8 428 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 TYW1BQ6NUM6 668 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 CYB5D1Q6P9G0 228 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 ABTB2Q8N961 1025 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 SSH3Q8TE77 659 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 CNPY3Q9BT09 278 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 BLOC1S6Q9UL45 172 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 PI4KAP2A4QPH2 592 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 DDR1Q08345 913 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 SCRN1Q12765 414 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 STX3Q13277 289 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 PPP4R3CPQ6ZMV5 832 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 PI4KAP1Q8N8J0 262 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 NRBP1Q9UHY1 535 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 SMAPO00193 183 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 GFPT2O94808 682 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 MYCNP04198 464 aaPredicted RBP7.72□□□□□ -1.17
CNOT1-216ENST00000569240 SERPINB2P05120 415 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 RCAN1P53805 252 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 RPGRQ92834 1020 aaKnown RBP7.72□□□□□ -1.17
CNOT1-216ENST00000569240 CLMNQ96JQ2 1002 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 PLAAQ9Y263 795 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 USP19O94966 1318 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 WDR19Q8NEZ3 1342 aa7.72□□□□□ -1.17
CNOT1-216ENST00000569240 SERPING1P05155 500 aa7.71□□□□□ -1.17
CNOT1-216ENST00000569240 ADCY8P40145 1251 aa7.71□□□□□ -1.17
CNOT1-216ENST00000569240 KIF11P52732 1056 aa7.71□□□□□ -1.17
CNOT1-216ENST00000569240 NAPAP54920 295 aa7.71□□□□□ -1.17
CNOT1-216ENST00000569240 NUP107P57740 925 aa7.71□□□□□ -1.17
CNOT1-216ENST00000569240 HSP90AA4PQ58FG1 418 aa7.71□□□□□ -1.17
CNOT1-216ENST00000569240 ZNF713Q8N859 430 aaPredicted RBP7.71□□□□□ -1.17
CNOT1-216ENST00000569240 EIF1ADQ8N9N8 165 aaKnown RBP7.71□□□□□ -1.17
CNOT1-216ENST00000569240 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.71□□□□□ -1.17
CNOT1-216ENST00000569240 RIOK1Q9BRS2 568 aaKnown RBP7.71□□□□□ -1.17
CNOT1-216ENST00000569240 EHD2Q9NZN4 543 aa7.71□□□□□ -1.17
CNOT1-216ENST00000569240 MAP3K2Q9Y2U5 619 aa7.71□□□□□ -1.17
CNOT1-216ENST00000569240 NUGGCQ68CJ6 796 aa7.71□□□□□ -1.17
CNOT1-216ENST00000569240 PASD1Q8IV76 773 aa7.71□□□□□ -1.17
CNOT1-216ENST00000569240 MMGT1Q8N4V1 131 aa7.71□□□□□ -1.17
CNOT1-216ENST00000569240 MIEF2Q96C03 454 aa7.71□□□□□ -1.17
CNOT1-216ENST00000569240 MYD88Q99836 296 aa7.71□□□□□ -1.17
CNOT1-216ENST00000569240 MXD3Q9BW11 206 aa7.71□□□□□ -1.17
CNOT1-216ENST00000569240 USP15Q9Y4E8 981 aaPredicted RBP7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms