RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 CCDC81Q6ZN84 652 aa9.98□□□□□ -0.81
CDH11-216ENST00000569128 CYFIP1Q7L576 1253 aa9.98□□□□□ -0.81
CDH11-216ENST00000569128 SMARCC1Q92922 1105 aaPredicted RBP9.98□□□□□ -0.81
CDH11-216ENST00000569128 NACC1Q96RE7 527 aa9.98□□□□□ -0.81
CDH11-216ENST00000569128 ZNF408Q9H9D4 720 aa9.98□□□□□ -0.81
CDH11-216ENST00000569128 PICK1Q9NRD5 415 aa9.98□□□□□ -0.81
CDH11-216ENST00000569128 CRIM1Q9NZV1 1036 aa9.98□□□□□ -0.81
CDH11-216ENST00000569128 SIRPGQ9P1W8 387 aa9.98□□□□□ -0.81
CDH11-216ENST00000569128 CHPF2Q9P2E5 772 aa9.98□□□□□ -0.81
CDH11-216ENST00000569128 NOB1Q9ULX3 412 aaKnown RBP9.98□□□□□ -0.81
CDH11-216ENST00000569128 HIF3AQ9Y2N7 669 aa9.98□□□□□ -0.81
CDH11-216ENST00000569128 C9orf172C9J069 976 aa9.97□□□□□ -0.81
CDH11-216ENST00000569128 HOXB7P09629 217 aa9.97□□□□□ -0.81
CDH11-216ENST00000569128 RRP1P56182 461 aaKnown RBP9.97□□□□□ -0.81
CDH11-216ENST00000569128 SOX4Q06945 474 aaPredicted RBP9.97□□□□□ -0.81
CDH11-216ENST00000569128 ALDH1L2Q3SY69 923 aa9.97□□□□□ -0.81
CDH11-216ENST00000569128 C20orf194Q5TEA3 1177 aa9.97□□□□□ -0.81
CDH11-216ENST00000569128 CCDC30Q5VVM6 783 aa9.97□□□□□ -0.81
CDH11-216ENST00000569128 DYMQ7RTS9 669 aa9.97□□□□□ -0.81
CDH11-216ENST00000569128 FRAT1Q92837 279 aaPredicted RBP9.97□□□□□ -0.81
CDH11-216ENST00000569128 FERD3LQ96RJ6 166 aa9.97□□□□□ -0.81
CDH11-216ENST00000569128 PHAXQ9H814 394 aaKnown RBP9.97□□□□□ -0.81
CDH11-216ENST00000569128 PCDHB14Q9Y5E9 798 aa9.97□□□□□ -0.81
CDH11-216ENST00000569128 CORINQ9Y5Q5 1042 aa9.97□□□□□ -0.81
CDH11-216ENST00000569128 RNF123Q5XPI4 1314 aa9.97□□□□□ -0.81
CDH11-216ENST00000569128 TIAF1O95411 115 aa9.96□□□□□ -0.82
CDH11-216ENST00000569128 CYP19A1P11511 503 aaPredicted RBP9.96□□□□□ -0.82
CDH11-216ENST00000569128 MYL6BP14649 208 aa9.96□□□□□ -0.82
CDH11-216ENST00000569128 GLB1P16278 677 aa9.96□□□□□ -0.82
CDH11-216ENST00000569128 IREB2P48200 963 aaKnown RBP9.96□□□□□ -0.82
CDH11-216ENST00000569128 ERVK-24P63145 666 aa9.96□□□□□ -0.82
CDH11-216ENST00000569128 NRG1Q02297 640 aaPredicted RBP9.96□□□□□ -0.82
CDH11-216ENST00000569128 FBXW10Q5XX13 1052 aa9.96□□□□□ -0.82
CDH11-216ENST00000569128 ANKRD34AQ69YU3 496 aa9.96□□□□□ -0.82
CDH11-216ENST00000569128 SMIM5Q71RC9 77 aa9.96□□□□□ -0.82
CDH11-216ENST00000569128 REXO1Q8N1G1 1221 aaKnown RBP9.96□□□□□ -0.82
CDH11-216ENST00000569128 LINC00116Q8NCU8 138 aa9.96□□□□□ -0.82
CDH11-216ENST00000569128 CPLX3Q8WVH0 158 aa9.96□□□□□ -0.82
CDH11-216ENST00000569128 FANCD2OSQ96PS1 177 aa9.96□□□□□ -0.82
CDH11-216ENST00000569128 DISC1Q9NRI5 854 aa9.96□□□□□ -0.82
CDH11-216ENST00000569128 STRIP2Q9ULQ0 834 aa9.96□□□□□ -0.82
CDH11-216ENST00000569128 TJP1Q07157 1748 aa9.96□□□□□ -0.82
CDH11-216ENST00000569128 NOS3P29474 1203 aa9.95□□□□□ -0.82
CDH11-216ENST00000569128 GRK4P32298 578 aa9.95□□□□□ -0.82
CDH11-216ENST00000569128 LRP10Q7Z4F1 713 aa9.95□□□□□ -0.82
CDH11-216ENST00000569128 WFDC12Q8WWY7 111 aa9.95□□□□□ -0.82
CDH11-216ENST00000569128 STK31Q9BXU1 1019 aa9.95□□□□□ -0.82
CDH11-216ENST00000569128 CCNL1Q9UK58 526 aaPredicted RBP9.95□□□□□ -0.82
CDH11-216ENST00000569128 SOS1Q07889 1333 aaPredicted RBP9.95□□□□□ -0.82
CDH11-216ENST00000569128 PREPP48147 710 aa9.94□□□□□ -0.82
CDH11-216ENST00000569128 ETF1P62495 437 aaKnown RBP9.94□□□□□ -0.82
CDH11-216ENST00000569128 RING1Q06587 406 aa9.94□□□□□ -0.82
CDH11-216ENST00000569128 AIMP1Q12904 312 aaKnown RBP9.94□□□□□ -0.82
CDH11-216ENST00000569128 MBTPS1Q14703 1052 aa9.94□□□□□ -0.82
CDH11-216ENST00000569128 INTS5Q6P9B9 1019 aaKnown RBP9.94□□□□□ -0.82
CDH11-216ENST00000569128 C2CD4AQ8NCU7 369 aaPredicted RBP9.94□□□□□ -0.82
CDH11-216ENST00000569128 SRPK1Q96SB4 655 aaKnown RBP9.94□□□□□ -0.82
CDH11-216ENST00000569128 SRRTQ9BXP5 876 aaKnown RBP9.94□□□□□ -0.82
CDH11-216ENST00000569128 TEX13AQ9BXU3 409 aaPredicted RBP9.94□□□□□ -0.82
CDH11-216ENST00000569128 ATXN3LQ9H3M9 355 aa9.94□□□□□ -0.82
CDH11-216ENST00000569128 DDX21Q9NR30 783 aaKnown RBP eCLIP9.94□□□□□ -0.82
CDH11-216ENST00000569128 DBF4Q9UBU7 674 aaPredicted RBP9.94□□□□□ -0.82
CDH11-216ENST00000569128 ZBTB1Q9Y2K1 713 aa9.94□□□□□ -0.82
CDH11-216ENST00000569128 COL4A3BPQ9Y5P4 624 aa9.94□□□□□ -0.82
CDH11-216ENST00000569128 ACTL7BQ9Y614 415 aa9.94□□□□□ -0.82
CDH11-216ENST00000569128 MRVI1Q9Y6F6 885 aa9.94□□□□□ -0.82
CDH11-216ENST00000569128 SART1O43290 800 aaKnown RBP9.93□□□□□ -0.82
CDH11-216ENST00000569128 HTR3BO95264 441 aa9.93□□□□□ -0.82
CDH11-216ENST00000569128 STARD3NLO95772 234 aa9.93□□□□□ -0.82
CDH11-216ENST00000569128 HCLS1P14317 486 aaPredicted RBP9.93□□□□□ -0.82
CDH11-216ENST00000569128 TRIM27P14373 513 aa9.93□□□□□ -0.82
CDH11-216ENST00000569128 PLCG1P19174 1290 aa9.93□□□□□ -0.82
CDH11-216ENST00000569128 CRKLP46109 303 aaKnown RBP9.93□□□□□ -0.82
CDH11-216ENST00000569128 TTLL4Q14679 1199 aa9.93□□□□□ -0.82
CDH11-216ENST00000569128 TXNRD1Q16881 649 aa9.93□□□□□ -0.82
CDH11-216ENST00000569128 ZBTB37Q5TC79 503 aa9.93□□□□□ -0.82
CDH11-216ENST00000569128 TTLL7Q6ZT98 887 aa9.93□□□□□ -0.82
CDH11-216ENST00000569128 ANKS3Q6ZW76 656 aa9.93□□□□□ -0.82
CDH11-216ENST00000569128 COPS6Q7L5N1 327 aa9.93□□□□□ -0.82
CDH11-216ENST00000569128 FILIP1Q7Z7B0 1213 aa9.93□□□□□ -0.82
CDH11-216ENST00000569128 DEFB132Q7Z7B7 95 aa9.93□□□□□ -0.82
CDH11-216ENST00000569128 ALYREFQ86V81 257 aaKnown RBP9.93□□□□□ -0.82
CDH11-216ENST00000569128 PANK1Q8TE04 598 aa9.93□□□□□ -0.82
CDH11-216ENST00000569128 XAGE3Q8WTP9 111 aa9.93□□□□□ -0.82
CDH11-216ENST00000569128 RNPC3Q96LT9 517 aaKnown RBP9.93□□□□□ -0.82
CDH11-216ENST00000569128 TRIM55Q9BYV6 548 aa9.93□□□□□ -0.82
CDH11-216ENST00000569128 CEP41Q9BYV8 373 aa9.93□□□□□ -0.82
CDH11-216ENST00000569128 EHMT1Q9H9B1 1298 aa9.93□□□□□ -0.82
CDH11-216ENST00000569128 KLHL42Q9P2K6 505 aa9.93□□□□□ -0.82
CDH11-216ENST00000569128 REV1Q9UBZ9 1251 aa9.93□□□□□ -0.82
CDH11-216ENST00000569128 TACC3Q9Y6A5 838 aa9.93□□□□□ -0.82
CDH11-216ENST00000569128 LAMB4A4D0S4 1761 aa9.93□□□□□ -0.82
CDH11-216ENST00000569128 LY75O60449 1722 aa9.93□□□□□ -0.82
CDH11-216ENST00000569128 TNS1Q9HBL0 1735 aaKnown RBP9.93□□□□□ -0.82
CDH11-216ENST00000569128 PLSCR1O15162 318 aa9.92□□□□□ -0.82
CDH11-216ENST00000569128 PGRP06401 933 aa9.92□□□□□ -0.82
CDH11-216ENST00000569128 ASPAP45381 313 aa9.92□□□□□ -0.82
CDH11-216ENST00000569128 ADGRE1Q14246 886 aa9.92□□□□□ -0.82
CDH11-216ENST00000569128 EZH2Q15910 746 aaKnown RBP9.92□□□□□ -0.82
CDH11-216ENST00000569128 PLEKHG4Q58EX7 1191 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms