RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 ATP13A1Q9HD20 1204 aa7.94□□□□□ -1.14
UBR1-208ENST00000569066 SAMD15Q9P1V8 674 aa7.94□□□□□ -1.14
UBR1-208ENST00000569066 PCDHA2Q9Y5H9 948 aa7.94□□□□□ -1.14
UBR1-208ENST00000569066 AQP7O14520 342 aa7.93□□□□□ -1.14
UBR1-208ENST00000569066 NEMP1O14524 444 aa7.93□□□□□ -1.14
UBR1-208ENST00000569066 MTMR1Q13613 665 aa7.93□□□□□ -1.14
UBR1-208ENST00000569066 STAT4Q14765 748 aa7.93□□□□□ -1.14
UBR1-208ENST00000569066 GAB4Q2WGN9 574 aa7.93□□□□□ -1.14
UBR1-208ENST00000569066 ARHGAP27Q6ZUM4 889 aa7.93□□□□□ -1.14
UBR1-208ENST00000569066 TRIM8Q9BZR9 551 aa7.93□□□□□ -1.14
UBR1-208ENST00000569066 CCDC8Q9H0W5 538 aaPredicted RBP7.93□□□□□ -1.14
UBR1-208ENST00000569066 TYW1Q9NV66 732 aaKnown RBP7.93□□□□□ -1.14
UBR1-208ENST00000569066 RNF112Q9ULX5 631 aa7.93□□□□□ -1.14
UBR1-208ENST00000569066 WASHC2CQ9Y4E1 1318 aa7.93□□□□□ -1.14
UBR1-208ENST00000569066 LTBRP36941 435 aa7.92□□□□□ -1.14
UBR1-208ENST00000569066 TMPRSS15P98073 1019 aa7.92□□□□□ -1.14
UBR1-208ENST00000569066 EXOSC10Q01780 885 aaKnown RBP7.92□□□□□ -1.14
UBR1-208ENST00000569066 ACBD5Q5T8D3 534 aaPredicted RBP7.92□□□□□ -1.14
UBR1-208ENST00000569066 DUSP27Q5VZP5 1158 aa7.92□□□□□ -1.14
UBR1-208ENST00000569066 EEF1DP3Q658K8 133 aa7.92□□□□□ -1.14
UBR1-208ENST00000569066 KSR1Q8IVT5 923 aa7.92□□□□□ -1.14
UBR1-208ENST00000569066 ZC3H7AQ8IWR0 971 aaKnown RBP7.92□□□□□ -1.14
UBR1-208ENST00000569066 WNK4Q96J92 1243 aa7.92□□□□□ -1.14
UBR1-208ENST00000569066 DUSP13Q9UII6 198 aa7.92□□□□□ -1.14
UBR1-208ENST00000569066 FGF10O15520 208 aaPredicted RBP7.92□□□□□ -1.14
UBR1-208ENST00000569066 LTKP29376 864 aa7.92□□□□□ -1.14
UBR1-208ENST00000569066 CYP27A1Q02318 531 aa7.92□□□□□ -1.14
UBR1-208ENST00000569066 LAPTM5Q13571 262 aa7.92□□□□□ -1.14
UBR1-208ENST00000569066 WWC2Q6AWC2 1192 aa7.92□□□□□ -1.14
UBR1-208ENST00000569066 RCSD1Q6JBY9 416 aa7.92□□□□□ -1.14
UBR1-208ENST00000569066 LINC00116Q8NCU8 138 aa7.92□□□□□ -1.14
UBR1-208ENST00000569066 PCDH19Q8TAB3 1148 aa7.92□□□□□ -1.14
UBR1-208ENST00000569066 WDR66Q8TBY9 1149 aa7.92□□□□□ -1.14
UBR1-208ENST00000569066 DIO2Q92813 273 aa7.92□□□□□ -1.14
UBR1-208ENST00000569066 SMAD5Q99717 465 aaKnown RBP7.92□□□□□ -1.14
UBR1-208ENST00000569066 CRTAC1Q9NQ79 661 aa7.92□□□□□ -1.14
UBR1-208ENST00000569066 GPR27Q9NS67 375 aa7.92□□□□□ -1.14
UBR1-208ENST00000569066 SEMA3GQ9NS98 782 aa7.92□□□□□ -1.14
UBR1-208ENST00000569066 CHPF2Q9P2E5 772 aa7.92□□□□□ -1.14
UBR1-208ENST00000569066 NPHP3-ACAD11A0A0J9YXS1 232 aa7.91□□□□□ -1.14
UBR1-208ENST00000569066 ARVCFO00192 962 aa7.91□□□□□ -1.14
UBR1-208ENST00000569066 PCBP3P57721 371 aaKnown RBP7.91□□□□□ -1.14
UBR1-208ENST00000569066 LBX2Q6XYB7 198 aa7.91□□□□□ -1.14
UBR1-208ENST00000569066 NOL8Q76FK4 1167 aaKnown RBP7.91□□□□□ -1.14
UBR1-208ENST00000569066 DBNDD2Q9BQY9 259 aa7.91□□□□□ -1.14
UBR1-208ENST00000569066 TRIT1Q9H3H1 467 aaKnown RBP7.91□□□□□ -1.14
UBR1-208ENST00000569066 M0R2C6 588 aa7.91□□□□□ -1.14
UBR1-208ENST00000569066 NOP2P46087 812 aaKnown RBP7.91□□□□□ -1.14
UBR1-208ENST00000569066 GPR85P60893 370 aa7.91□□□□□ -1.14
UBR1-208ENST00000569066 OSBPL1AQ9BXW6 950 aa7.91□□□□□ -1.14
UBR1-208ENST00000569066 CKMP06732 381 aa7.9□□□□□ -1.14
UBR1-208ENST00000569066 CD96P40200 585 aa7.9□□□□□ -1.14
UBR1-208ENST00000569066 GSK3AP49840 483 aa7.9□□□□□ -1.14
UBR1-208ENST00000569066 IFNL3Q8IZI9 196 aa7.9□□□□□ -1.14
UBR1-208ENST00000569066 PI4K2BQ8TCG2 481 aa7.9□□□□□ -1.14
UBR1-208ENST00000569066 ASPSCR1Q9BZE9 553 aa7.9□□□□□ -1.14
UBR1-208ENST00000569066 GPR39O43194 453 aa7.9□□□□□ -1.15
UBR1-208ENST00000569066 CEBPAP49715 358 aaPredicted RBP7.9□□□□□ -1.15
UBR1-208ENST00000569066 AHI1Q8N157 1196 aa7.9□□□□□ -1.15
UBR1-208ENST00000569066 CISD2Q8N5K1 135 aaKnown RBP7.9□□□□□ -1.15
UBR1-208ENST00000569066 MTMR8Q96EF0 704 aa7.9□□□□□ -1.15
UBR1-208ENST00000569066 PTCHD1Q96NR3 888 aa7.9□□□□□ -1.15
UBR1-208ENST00000569066 ERVK13-1Q9NX77 482 aa7.9□□□□□ -1.15
UBR1-208ENST00000569066 BTG4Q9NY30 223 aa7.9□□□□□ -1.15
UBR1-208ENST00000569066 ALDH1L1O75891 902 aa7.89□□□□□ -1.15
UBR1-208ENST00000569066 ESR1P03372 595 aa7.89□□□□□ -1.15
UBR1-208ENST00000569066 PAMP19021 973 aa7.89□□□□□ -1.15
UBR1-208ENST00000569066 RPL10P27635 214 aaKnown RBP7.89□□□□□ -1.15
UBR1-208ENST00000569066 ADCYAP1R1P41586 468 aa7.89□□□□□ -1.15
UBR1-208ENST00000569066 DHCR24Q15392 516 aa7.89□□□□□ -1.15
UBR1-208ENST00000569066 CREG2Q8IUH2 290 aa7.89□□□□□ -1.15
UBR1-208ENST00000569066 TSR2Q969E8 191 aaKnown RBP7.89□□□□□ -1.15
UBR1-208ENST00000569066 IPPKQ9H8X2 491 aa7.89□□□□□ -1.15
UBR1-208ENST00000569066 TRAF5O00463 557 aa7.89□□□□□ -1.15
UBR1-208ENST00000569066 SOD2P04179 222 aa7.89□□□□□ -1.15
UBR1-208ENST00000569066 TEKQ02763 1124 aa7.89□□□□□ -1.15
UBR1-208ENST00000569066 DOC2BQ14184 412 aa7.89□□□□□ -1.15
UBR1-208ENST00000569066 TESK1Q15569 626 aa7.89□□□□□ -1.15
UBR1-208ENST00000569066 E4F1Q66K89 784 aaPredicted RBP7.89□□□□□ -1.15
UBR1-208ENST00000569066 FMNL3Q8IVF7 1028 aa7.89□□□□□ -1.15
UBR1-208ENST00000569066 TMEM52Q8NDY8 209 aa7.89□□□□□ -1.15
UBR1-208ENST00000569066 CEP89Q96ST8 783 aa7.89□□□□□ -1.15
UBR1-208ENST00000569066 H2AFY2Q9P0M6 372 aaPredicted RBP7.89□□□□□ -1.15
UBR1-208ENST00000569066 ZC3H7BQ9UGR2 993 aaKnown RBP7.89□□□□□ -1.15
UBR1-208ENST00000569066 PITPNM2Q9BZ72 1349 aa7.88□□□□□ -1.15
UBR1-208ENST00000569066 ALG1L2C9J202 215 aa7.88□□□□□ -1.15
UBR1-208ENST00000569066 PYGMP11217 842 aa7.88□□□□□ -1.15
UBR1-208ENST00000569066 DSG1Q02413 1049 aa7.88□□□□□ -1.15
UBR1-208ENST00000569066 EGR3Q06889 387 aa7.88□□□□□ -1.15
UBR1-208ENST00000569066 PAK1Q13153 545 aa7.88□□□□□ -1.15
UBR1-208ENST00000569066 KCNAB2Q13303 367 aa7.88□□□□□ -1.15
UBR1-208ENST00000569066 PLA2G4EQ3MJ16 856 aa7.88□□□□□ -1.15
UBR1-208ENST00000569066 RSPO2Q6UXX9 243 aaPredicted RBP7.88□□□□□ -1.15
UBR1-208ENST00000569066 UBE2R2Q712K3 238 aaPredicted RBP7.88□□□□□ -1.15
UBR1-208ENST00000569066 CDIP1Q9H305 208 aa7.88□□□□□ -1.15
UBR1-208ENST00000569066 EID1Q9Y6B2 187 aa7.88□□□□□ -1.15
UBR1-208ENST00000569066 PHLDB1Q86UU1 1377 aa7.88□□□□□ -1.15
UBR1-208ENST00000569066 SSU72P8A0A1W2PR75 194 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 C7orf72A4D263 438 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 CBX4O00257 560 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms