RNA–Protein interactions for RNA: ENST00000568340.5

CDH11-214, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-214ENST00000568340 PNMA2Q9UL42 364 aa11.84□□□□□ -0.51
CDH11-214ENST00000568340 MRPL11Q9Y3B7 192 aaKnown RBP11.84□□□□□ -0.51
CDH11-214ENST00000568340 TMEM88BA6NKF7 163 aa11.83□□□□□ -0.52
CDH11-214ENST00000568340 DDX11L8A8MPP1 907 aa11.83□□□□□ -0.52
CDH11-214ENST00000568340 ZBED4O75132 1171 aa11.83□□□□□ -0.52
CDH11-214ENST00000568340 MRPL12P52815 198 aaKnown RBP11.83□□□□□ -0.52
CDH11-214ENST00000568340 ATP2C1P98194 919 aaPredicted RBP11.83□□□□□ -0.52
CDH11-214ENST00000568340 TRAF1Q13077 416 aa11.83□□□□□ -0.52
CDH11-214ENST00000568340 SF3A1Q15459 793 aaKnown RBP11.83□□□□□ -0.52
CDH11-214ENST00000568340 INF2Q27J81 1249 aa11.83□□□□□ -0.52
CDH11-214ENST00000568340 SLC30A10Q6XR72 485 aa11.83□□□□□ -0.52
CDH11-214ENST00000568340 GPT2Q8TD30 523 aa11.83□□□□□ -0.52
CDH11-214ENST00000568340 SYTL5Q8TDW5 730 aaPredicted RBP11.83□□□□□ -0.52
CDH11-214ENST00000568340 ZNF396Q96N95 335 aaPredicted RBP11.83□□□□□ -0.52
CDH11-214ENST00000568340 ZIC5Q96T25 663 aa11.83□□□□□ -0.52
CDH11-214ENST00000568340 SCAND2PQ9GZW5 306 aaPredicted RBP11.83□□□□□ -0.52
CDH11-214ENST00000568340 MAF1Q9H063 256 aa11.83□□□□□ -0.52
CDH11-214ENST00000568340 ZCCHC17Q9NP64 241 aaKnown RBP11.83□□□□□ -0.52
CDH11-214ENST00000568340 MORF4L1Q9UBU8 362 aa11.83□□□□□ -0.52
CDH11-214ENST00000568340 BIN2Q9UBW5 565 aaPredicted RBP11.83□□□□□ -0.52
CDH11-214ENST00000568340 MRVI1Q9Y6F6 885 aa11.83□□□□□ -0.52
CDH11-214ENST00000568340 ASTN1O14525 1302 aa11.83□□□□□ -0.52
CDH11-214ENST00000568340 MYH7BA7E2Y1 1941 aa11.82□□□□□ -0.52
CDH11-214ENST00000568340 FAM237AA0A1B0GTK4 181 aa11.82□□□□□ -0.52
CDH11-214ENST00000568340 RASSF10A6NK89 507 aa11.82□□□□□ -0.52
CDH11-214ENST00000568340 CYP2C8P10632 490 aa11.82□□□□□ -0.52
CDH11-214ENST00000568340 HOXA13P31271 388 aaPredicted RBP11.82□□□□□ -0.52
CDH11-214ENST00000568340 CIITAP33076 1130 aa11.82□□□□□ -0.52
CDH11-214ENST00000568340 MKRN3Q13064 507 aaKnown RBP11.82□□□□□ -0.52
CDH11-214ENST00000568340 NONOQ15233 471 aaKnown RBP eCLIP11.82□□□□□ -0.52
CDH11-214ENST00000568340 IL17AQ16552 155 aa11.82□□□□□ -0.52
CDH11-214ENST00000568340 TKFCQ3LXA3 575 aa11.82□□□□□ -0.52
CDH11-214ENST00000568340 TTC38Q5R3I4 469 aa11.82□□□□□ -0.52
CDH11-214ENST00000568340 SNRNP48Q6IEG0 339 aaKnown RBP11.82□□□□□ -0.52
CDH11-214ENST00000568340 CPXCR1Q8N123 301 aa11.82□□□□□ -0.52
CDH11-214ENST00000568340 TBCKQ8TEA7 893 aa11.82□□□□□ -0.52
CDH11-214ENST00000568340 FGD4Q96M96 766 aa11.82□□□□□ -0.52
CDH11-214ENST00000568340 MOV10L1Q9BXT6 1211 aaKnown RBP11.82□□□□□ -0.52
CDH11-214ENST00000568340 SPATC1LQ9H0A9 340 aa11.82□□□□□ -0.52
CDH11-214ENST00000568340 TMEM60Q9H2L4 133 aa11.82□□□□□ -0.52
CDH11-214ENST00000568340 RNF146Q9NTX7 359 aa11.82□□□□□ -0.52
CDH11-214ENST00000568340 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.82□□□□□ -0.52
CDH11-214ENST00000568340 FBXO2Q9UK22 296 aaPredicted RBP11.82□□□□□ -0.52
CDH11-214ENST00000568340 CFAP45Q9UL16 551 aa11.82□□□□□ -0.52
CDH11-214ENST00000568340 ZNF236Q9UL36 1845 aa11.81□□□□□ -0.52
CDH11-214ENST00000568340 CYP3A7-CYP3A51PA0A087WV96 503 aa11.81□□□□□ -0.52
CDH11-214ENST00000568340 CCDC194A0A1B0GVG4 234 aa11.81□□□□□ -0.52
CDH11-214ENST00000568340 MANSC4A6NHS7 340 aaPredicted RBP11.81□□□□□ -0.52
CDH11-214ENST00000568340 PDHXO00330 501 aa11.81□□□□□ -0.52
CDH11-214ENST00000568340 SLC37A4O43826 429 aa11.81□□□□□ -0.52
CDH11-214ENST00000568340 PPP6R2O75170 966 aa11.81□□□□□ -0.52
CDH11-214ENST00000568340 TDP2O95551 362 aa11.81□□□□□ -0.52
CDH11-214ENST00000568340 CYP3A4P08684 503 aa11.81□□□□□ -0.52
CDH11-214ENST00000568340 ALAS1P13196 640 aa11.81□□□□□ -0.52
CDH11-214ENST00000568340 PTPREP23469 700 aa11.81□□□□□ -0.52
CDH11-214ENST00000568340 CYP3A7P24462 503 aa11.81□□□□□ -0.52
CDH11-214ENST00000568340 STAT3P40763 770 aa11.81□□□□□ -0.52
CDH11-214ENST00000568340 ZNF157P51786 506 aaPredicted RBP11.81□□□□□ -0.52
CDH11-214ENST00000568340 RPS6P62753 249 aaKnown RBP11.81□□□□□ -0.52
CDH11-214ENST00000568340 IRX3P78415 501 aaPredicted RBP11.81□□□□□ -0.52
CDH11-214ENST00000568340 GRIN1Q05586 938 aa11.81□□□□□ -0.52
CDH11-214ENST00000568340 PABPC4Q13310 644 aaKnown RBP eCLIP11.81□□□□□ -0.52
CDH11-214ENST00000568340 ORC2Q13416 577 aaPredicted RBP11.81□□□□□ -0.52
CDH11-214ENST00000568340 Q3C1V9 767 aa11.81□□□□□ -0.52
CDH11-214ENST00000568340 MOXD1Q6UVY6 613 aa11.81□□□□□ -0.52
CDH11-214ENST00000568340 NEK8Q86SG6 692 aa11.81□□□□□ -0.52
CDH11-214ENST00000568340 TNS4Q8IZW8 715 aa11.81□□□□□ -0.52
CDH11-214ENST00000568340 SAMD3Q8N6K7 520 aa11.81□□□□□ -0.52
CDH11-214ENST00000568340 IL31RAQ8NI17 732 aa11.81□□□□□ -0.52
CDH11-214ENST00000568340 GTF3C2Q8WUA4 911 aaPredicted RBP11.81□□□□□ -0.52
CDH11-214ENST00000568340 SPATA32Q96LK8 384 aa11.81□□□□□ -0.52
CDH11-214ENST00000568340 TRERF1Q96PN7 1200 aa11.81□□□□□ -0.52
CDH11-214ENST00000568340 A1CFQ9NQ94 594 aaKnown RBP11.81□□□□□ -0.52
CDH11-214ENST00000568340 MAP3K20Q9NYL2 800 aaKnown RBP11.81□□□□□ -0.52
CDH11-214ENST00000568340 PCDHA7Q9UN72 937 aa11.81□□□□□ -0.52
CDH11-214ENST00000568340 RABGAP1Q9Y3P9 1069 aa11.81□□□□□ -0.52
CDH11-214ENST00000568340 IGLV3-22A0A075B6J6 115 aa11.8□□□□□ -0.52
CDH11-214ENST00000568340 GCOM1H8Y6P7 765 aaPredicted RBP11.8□□□□□ -0.52
CDH11-214ENST00000568340 SPTLC2O15270 562 aa11.8□□□□□ -0.52
CDH11-214ENST00000568340 PRPF40AO75400 957 aaKnown RBP11.8□□□□□ -0.52
CDH11-214ENST00000568340 POLR2MP0CAP2 368 aa11.8□□□□□ -0.52
CDH11-214ENST00000568340 BCRP11274 1271 aa11.8□□□□□ -0.52
CDH11-214ENST00000568340 OSBPP22059 807 aa11.8□□□□□ -0.52
CDH11-214ENST00000568340 ERVK-9P63128 1117 aa11.8□□□□□ -0.52
CDH11-214ENST00000568340 ERVK-24P63145 666 aa11.8□□□□□ -0.52
CDH11-214ENST00000568340 ARHGAP4P98171 946 aa11.8□□□□□ -0.52
CDH11-214ENST00000568340 CEBPZQ03701 1054 aaKnown RBP11.8□□□□□ -0.52
CDH11-214ENST00000568340 MCTP2Q6DN12 878 aa11.8□□□□□ -0.52
CDH11-214ENST00000568340 PPP4R3AQ6IN85 833 aa11.8□□□□□ -0.52
CDH11-214ENST00000568340 SAMD1Q6SPF0 538 aaPredicted RBP11.8□□□□□ -0.52
CDH11-214ENST00000568340 SHCBP1Q8NEM2 672 aa11.8□□□□□ -0.52
CDH11-214ENST00000568340 CHST13Q8NET6 341 aa11.8□□□□□ -0.52
CDH11-214ENST00000568340 KCNG4Q8TDN1 519 aa11.8□□□□□ -0.52
CDH11-214ENST00000568340 MTMR9Q96QG7 549 aa11.8□□□□□ -0.52
CDH11-214ENST00000568340 GOLPH3LQ9H4A5 285 aa11.8□□□□□ -0.52
CDH11-214ENST00000568340 CREBZFQ9NS37 354 aa11.8□□□□□ -0.52
CDH11-214ENST00000568340 CYP39A1Q9NYL5 469 aa11.8□□□□□ -0.52
CDH11-214ENST00000568340 PNMA3Q9UL41 463 aa11.8□□□□□ -0.52
CDH11-214ENST00000568340 NOL7Q9UMY1 257 aaKnown RBP11.8□□□□□ -0.52
CDH11-214ENST00000568340 DNAJC25-GNG10A0A024R161 153 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms