RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 RBM28Q9NW13 759 aaKnown RBP25.08■■□□□ 1.61
NME3-210ENST00000567271 ADD3Q9UEY8 706 aaKnown RBP25.08■■□□□ 1.61
NME3-210ENST00000567271 ANAPC15P60006 121 aa25.07■■□□□ 1.6
NME3-210ENST00000567271 ANKLE1Q8NAG6 615 aa25.07■■□□□ 1.6
NME3-210ENST00000567271 PIBF1Q8WXW3 757 aa25.07■■□□□ 1.6
NME3-210ENST00000567271 ABHD16BQ9H3Z7 469 aa25.07■■□□□ 1.6
NME3-210ENST00000567271 OPLAHO14841 1288 aa25.06■■□□□ 1.6
NME3-210ENST00000567271 ACVR2BQ13705 512 aa25.06■■□□□ 1.6
NME3-210ENST00000567271 RTN1Q16799 776 aa25.06■■□□□ 1.6
NME3-210ENST00000567271 C8orf34Q49A92 452 aa25.06■■□□□ 1.6
NME3-210ENST00000567271 MORC4Q8TE76 937 aa25.06■■□□□ 1.6
NME3-210ENST00000567271 LCTP09848 1927 aa25.06■■□□□ 1.6
NME3-210ENST00000567271 LOC102724159A0A0B4J2E5 919 aa25.05■■□□□ 1.6
NME3-210ENST00000567271 GOLGA8AA7E2F4 631 aa25.05■■□□□ 1.6
NME3-210ENST00000567271 GOLGA8BA8MQT2 603 aa25.05■■□□□ 1.6
NME3-210ENST00000567271 FARP2O94887 1054 aaPredicted RBP25.05■■□□□ 1.6
NME3-210ENST00000567271 MNX1P50219 401 aaPredicted RBP25.05■■□□□ 1.6
NME3-210ENST00000567271 ALDH5A1P51649 535 aaPredicted RBP25.05■■□□□ 1.6
NME3-210ENST00000567271 GHRHRQ02643 423 aa25.05■■□□□ 1.6
NME3-210ENST00000567271 PWP2Q15269 919 aaKnown RBP25.05■■□□□ 1.6
NME3-210ENST00000567271 CCDC82Q8N4S0 544 aa25.05■■□□□ 1.6
NME3-210ENST00000567271 UPF3BQ9BZI7 483 aaKnown RBP25.05■■□□□ 1.6
NME3-210ENST00000567271 KATNBL1Q9H079 304 aa25.05■■□□□ 1.6
NME3-210ENST00000567271 FAM217BQ9NTX9 383 aaPredicted RBP25.05■■□□□ 1.6
NME3-210ENST00000567271 SEC63Q9UGP8 760 aaKnown RBP25.05■■□□□ 1.6
NME3-210ENST00000567271 ZHX1Q9UKY1 873 aaPredicted RBP25.05■■□□□ 1.6
NME3-210ENST00000567271 EVCP57679 992 aa25.04■■□□□ 1.6
NME3-210ENST00000567271 TOB2Q14106 344 aaPredicted RBP25.04■■□□□ 1.6
NME3-210ENST00000567271 PPP2R5BQ15173 497 aa25.04■■□□□ 1.6
NME3-210ENST00000567271 ANO1Q5XXA6 986 aa25.04■■□□□ 1.6
NME3-210ENST00000567271 DNERQ8NFT8 737 aa25.04■■□□□ 1.6
NME3-210ENST00000567271 SYTL5Q8TDW5 730 aaPredicted RBP25.04■■□□□ 1.6
NME3-210ENST00000567271 IL17RAQ96F46 866 aa25.04■■□□□ 1.6
NME3-210ENST00000567271 NAP1L2Q9ULW6 460 aaPredicted RBP25.04■■□□□ 1.6
NME3-210ENST00000567271 DDX49Q9Y6V7 483 aaKnown RBP25.04■■□□□ 1.6
NME3-210ENST00000567271 CFBP00751 764 aa25.03■■□□□ 1.6
NME3-210ENST00000567271 AKR1A1P14550 325 aa25.03■■□□□ 1.6
NME3-210ENST00000567271 CDC27P30260 824 aa25.03■■□□□ 1.6
NME3-210ENST00000567271 FUT2Q10981 343 aa25.03■■□□□ 1.6
NME3-210ENST00000567271 MAP3K20Q9NYL2 800 aaKnown RBP25.03■■□□□ 1.6
NME3-210ENST00000567271 FAM184BQ9ULE4 1060 aa25.03■■□□□ 1.6
NME3-210ENST00000567271 MCM3APO60318 1980 aa25.03■■□□□ 1.6
NME3-210ENST00000567271 METAP2P50579 478 aaKnown RBP eCLIP25.02■■□□□ 1.6
NME3-210ENST00000567271 HSD17B4P51659 736 aa25.02■■□□□ 1.6
NME3-210ENST00000567271 SAMD3Q8N6K7 520 aa25.02■■□□□ 1.6
NME3-210ENST00000567271 DIS3LQ8TF46 1054 aaKnown RBP25.02■■□□□ 1.6
NME3-210ENST00000567271 PAWRQ96IZ0 340 aaKnown RBP25.02■■□□□ 1.6
NME3-210ENST00000567271 TAAR1Q96RJ0 339 aa25.02■■□□□ 1.6
NME3-210ENST00000567271 PDRG1Q9NUG6 133 aa25.02■■□□□ 1.6
NME3-210ENST00000567271 COL20A1Q9P218 1284 aa25.02■■□□□ 1.6
NME3-210ENST00000567271 TNRC18O15417 2968 aaPredicted RBP25.02■■□□□ 1.6
NME3-210ENST00000567271 hCG_1642624A0A1W2PR95 340 aa25.01■■□□□ 1.59
NME3-210ENST00000567271 RARBP10826 455 aa25.01■■□□□ 1.59
NME3-210ENST00000567271 ADD1P35611 737 aaKnown RBP25.01■■□□□ 1.59
NME3-210ENST00000567271 CCDC144BQ3MJ40 725 aa25.01■■□□□ 1.59
NME3-210ENST00000567271 NID2Q14112 1375 aa25.01■■□□□ 1.59
NME3-210ENST00000567271 CCDC196A0A1B0GTZ2 297 aa25■■□□□ 1.59
NME3-210ENST00000567271 EDNRBP24530 442 aa25■■□□□ 1.59
NME3-210ENST00000567271 PDIA3P30101 505 aaKnown RBP25■■□□□ 1.59
NME3-210ENST00000567271 NECAB2Q7Z6G3 386 aa25■■□□□ 1.59
NME3-210ENST00000567271 MPHOSPH6Q99547 160 aaKnown RBP25■■□□□ 1.59
NME3-210ENST00000567271 CNTNAP5Q8WYK1 1306 aa25■■□□□ 1.59
NME3-210ENST00000567271 FRMPD3Q5JV73 1810 aa25■■□□□ 1.59
NME3-210ENST00000567271 GCOM1H8Y6P7 765 aaPredicted RBP24.99■■□□□ 1.59
NME3-210ENST00000567271 POLR2MP0CAP2 368 aa24.99■■□□□ 1.59
NME3-210ENST00000567271 TAPT1Q6NXT6 567 aa24.99■■□□□ 1.59
NME3-210ENST00000567271 EEPD1Q7L9B9 569 aa24.99■■□□□ 1.59
NME3-210ENST00000567271 ARRDC4Q8NCT1 418 aa24.99■■□□□ 1.59
NME3-210ENST00000567271 NSUN6Q8TEA1 469 aaKnown RBP24.99■■□□□ 1.59
NME3-210ENST00000567271 RMDN3Q96TC7 470 aa24.99■■□□□ 1.59
NME3-210ENST00000567271 VTA1Q9NP79 307 aa24.99■■□□□ 1.59
NME3-210ENST00000567271 XPNPEP3Q9NQH7 507 aa24.99■■□□□ 1.59
NME3-210ENST00000567271 GTF3C3Q9Y5Q9 886 aa24.99■■□□□ 1.59
NME3-210ENST00000567271 B4DLN1 442 aa24.98■■□□□ 1.59
NME3-210ENST00000567271 HOXA13P31271 388 aaPredicted RBP24.98■■□□□ 1.59
NME3-210ENST00000567271 MRPL12P52815 198 aaKnown RBP24.98■■□□□ 1.59
NME3-210ENST00000567271 PDE4DQ08499 809 aa24.98■■□□□ 1.59
NME3-210ENST00000567271 FBXO16Q8IX29 292 aaPredicted RBP24.98■■□□□ 1.59
NME3-210ENST00000567271 LENG1Q96BZ8 264 aaPredicted RBP24.98■■□□□ 1.59
NME3-210ENST00000567271 ALDH8A1Q9H2A2 487 aaPredicted RBP24.98■■□□□ 1.59
NME3-210ENST00000567271 C11orf49Q9H6J7 331 aa24.98■■□□□ 1.59
NME3-210ENST00000567271 V9GY48 417 aaPredicted RBP24.98■■□□□ 1.59
NME3-210ENST00000567271 DNM1LO00429 736 aa24.97■■□□□ 1.59
NME3-210ENST00000567271 ADCY6O43306 1168 aa24.97■■□□□ 1.59
NME3-210ENST00000567271 DUSP11O75319 330 aaKnown RBP24.97■■□□□ 1.59
NME3-210ENST00000567271 GJC2Q5T442 439 aaPredicted RBP24.97■■□□□ 1.59
NME3-210ENST00000567271 ZNF274Q96GC6 653 aaPredicted RBP24.97■■□□□ 1.59
NME3-210ENST00000567271 IWS1Q96ST2 819 aa24.97■■□□□ 1.59
NME3-210ENST00000567271 PDGFCQ9NRA1 345 aa24.97■■□□□ 1.59
NME3-210ENST00000567271 COL6A1P12109 1028 aa24.96■■□□□ 1.59
NME3-210ENST00000567271 ADCYAP1R1P41586 468 aa24.96■■□□□ 1.59
NME3-210ENST00000567271 LRRC41Q15345 812 aa24.96■■□□□ 1.59
NME3-210ENST00000567271 ARHGEF16Q5VV41 709 aa24.96■■□□□ 1.59
NME3-210ENST00000567271 LARP6Q9BRS8 491 aaKnown RBP24.96■■□□□ 1.59
NME3-210ENST00000567271 PXMP2Q9NR77 195 aa24.96■■□□□ 1.59
NME3-210ENST00000567271 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.95■■□□□ 1.58
NME3-210ENST00000567271 ADAMTS4O75173 837 aa24.95■■□□□ 1.58
NME3-210ENST00000567271 PGK1P00558 417 aa24.95■■□□□ 1.58
NME3-210ENST00000567271 CCT2P78371 535 aaKnown RBP24.95■■□□□ 1.58
NME3-210ENST00000567271 TNFAIP2Q03169 654 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms