RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 THSD7BQ9C0I4 1608 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 WDR19Q8NEZ3 1342 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 PDE2AO00408 941 aaPredicted RBP7.23□□□□□ -1.25
GINS3-206ENST00000567143 MYO1BO43795 1136 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 DPEP1P16444 411 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 ACTN2P35609 894 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 USP5P45974 858 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 APBA1Q02410 837 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 BRD3Q15059 726 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 NPY5RQ15761 445 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 ERFEQ4G0M1 354 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 CAVIN4Q5BKX8 364 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 TXNRD3Q86VQ6 643 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 TRIML1Q8N9V2 468 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 ZNF384Q8TF68 577 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 ZHX3Q9H4I2 956 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 MKNK2Q9HBH9 465 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 LRWD1Q9UFC0 647 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 TTF2Q9UNY4 1162 aaKnown RBP7.23□□□□□ -1.25
GINS3-206ENST00000567143 STK36Q9NRP7 1315 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 YBX3P16989 372 aaKnown RBP eCLIP7.23□□□□□ -1.25
GINS3-206ENST00000567143 GGCXP38435 758 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 TECP42680 631 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 PDE4DQ08499 809 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 DTHD1Q6ZMT9 781 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 TMTC3Q6ZXV5 915 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 C2CD5Q86YS7 1000 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 IRF2BP1Q8IU81 584 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 SP8Q8IXZ3 490 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 OR8K1Q8NGG5 319 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 UBA5Q9GZZ9 404 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 RASSF4Q9H2L5 321 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 NLRC4Q9NPP4 1024 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 SAR1BQ9Y6B6 198 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 H0YIN7 160 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 ATP1A2P50993 1020 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 CACNB1Q02641 598 aaPredicted RBP7.23□□□□□ -1.25
GINS3-206ENST00000567143 MECOMQ03112 1051 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 ALX1Q15699 326 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 SND1Q7KZF4 910 aaKnown RBP eCLIP7.23□□□□□ -1.25
GINS3-206ENST00000567143 NBPF5PQ86XG9 351 aaPredicted RBP7.23□□□□□ -1.25
GINS3-206ENST00000567143 CLEC10AQ8IUN9 316 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 ANKRD18AQ8IVF6 992 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 ZNF579Q8NAF0 562 aaKnown RBP7.23□□□□□ -1.25
GINS3-206ENST00000567143 LRRC15Q8TF66 581 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 FERMT2Q96AC1 680 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 RRP36Q96EU6 259 aaKnown RBP7.23□□□□□ -1.25
GINS3-206ENST00000567143 RBM17Q96I25 401 aaKnown RBP7.23□□□□□ -1.25
GINS3-206ENST00000567143 TUBGCP2Q9BSJ2 902 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 KAT14Q9H8E8 782 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 SAMM50Q9Y512 469 aa7.23□□□□□ -1.25
GINS3-206ENST00000567143 CCNT1O60563 726 aaKnown RBP7.22□□□□□ -1.25
GINS3-206ENST00000567143 MOCS3O95396 460 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 GNAT2P19087 354 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 PBX1P40424 430 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 TXKP42681 527 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 HERVK_113P62684 666 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 ATP2C1P98194 919 aaPredicted RBP7.22□□□□□ -1.25
GINS3-206ENST00000567143 FUT2Q10981 343 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 STK4Q13043 487 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 TDRD12Q587J7 1177 aaKnown RBP7.22□□□□□ -1.25
GINS3-206ENST00000567143 PDXDC2PQ6P474 469 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 DZIP1Q86YF9 867 aaKnown RBP7.22□□□□□ -1.25
GINS3-206ENST00000567143 TTLL6Q8N841 843 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 SPATA20Q8TB22 786 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 COG1Q8WTW3 980 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 NOC4LQ9BVI4 516 aaKnown RBP7.22□□□□□ -1.25
GINS3-206ENST00000567143 ZNHIT6Q9NWK9 470 aaKnown RBP7.22□□□□□ -1.25
GINS3-206ENST00000567143 CWC15Q9P013 229 aaKnown RBP7.22□□□□□ -1.25
GINS3-206ENST00000567143 PACSIN2Q9UNF0 486 aaPredicted RBP7.22□□□□□ -1.25
GINS3-206ENST00000567143 ZSCAN5CA6NGD5 496 aaPredicted RBP7.22□□□□□ -1.25
GINS3-206ENST00000567143 MAP2K7O14733 419 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 PSMA7O14818 248 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 EPHB6O15197 1021 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 PRPF3O43395 683 aaKnown RBP7.22□□□□□ -1.25
GINS3-206ENST00000567143 AKR1B10O60218 316 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 ZEB2O60315 1214 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 PLCG1P19174 1290 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 PDE4CQ08493 712 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 GRAPQ13588 217 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 DALRD3Q5D0E6 543 aaKnown RBP7.22□□□□□ -1.25
GINS3-206ENST00000567143 NFRKBQ6P4R8 1299 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 MAPKAPK5Q8IW41 473 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 RTKN2Q8IZC4 609 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 BLIDQ8IZY5 108 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 MB21D1Q8N884 522 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 PNMA1Q8ND90 353 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 GLIS3Q8NEA6 775 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 GRAPLQ8TC17 118 aaPredicted RBP7.22□□□□□ -1.25
GINS3-206ENST00000567143 IFT81Q8WYA0 676 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 MS4A14Q96JA4 679 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 CCDC42Q96M95 316 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 RIOK1Q9BRS2 568 aaKnown RBP7.22□□□□□ -1.25
GINS3-206ENST00000567143 GOLPH3Q9H4A6 298 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 BIN2Q9UBW5 565 aaPredicted RBP7.22□□□□□ -1.25
GINS3-206ENST00000567143 ATP6V0A2Q9Y487 856 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 CACNA1SQ13698 1873 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 CNTNAP5Q8WYK1 1306 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 GTPBP6O43824 516 aaPredicted RBP7.22□□□□□ -1.25
GINS3-206ENST00000567143 SLURP2P0DP57 97 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms