RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 ZSCAN29Q8IWY8 852 aaPredicted RBP27.73■■■□□ 2.03
FANCA-221ENST00000566889 RNF10Q8N5U6 811 aaKnown RBP27.73■■■□□ 2.03
FANCA-221ENST00000566889 CSGALNACT2Q8N6G5 542 aa27.73■■■□□ 2.03
FANCA-221ENST00000566889 EIF1ADQ8N9N8 165 aaKnown RBP27.73■■■□□ 2.03
FANCA-221ENST00000566889 GIMAP8Q8ND71 665 aaPredicted RBP27.73■■■□□ 2.03
FANCA-221ENST00000566889 ISCA1Q9BUE6 129 aa27.73■■■□□ 2.03
FANCA-221ENST00000566889 BICDL2A1A5D9 508 aa27.73■■■□□ 2.03
FANCA-221ENST00000566889 GSG1L2A8MUP6 293 aa27.73■■■□□ 2.03
FANCA-221ENST00000566889 RHOBTB3O94955 611 aa27.73■■■□□ 2.03
FANCA-221ENST00000566889 MBD4O95243 580 aa27.73■■■□□ 2.03
FANCA-221ENST00000566889 HSPA9P38646 679 aaKnown RBP27.73■■■□□ 2.03
FANCA-221ENST00000566889 GUCY2DQ02846 1103 aa27.73■■■□□ 2.03
FANCA-221ENST00000566889 FKBP15Q5T1M5 1219 aa27.73■■■□□ 2.03
FANCA-221ENST00000566889 THEMISQ8N1K5 641 aaPredicted RBP27.73■■■□□ 2.03
FANCA-221ENST00000566889 TLR10Q9BXR5 811 aa27.73■■■□□ 2.03
FANCA-221ENST00000566889 KLK7P49862 253 aa27.72■■■□□ 2.03
FANCA-221ENST00000566889 XRCC4Q13426 336 aa27.72■■■□□ 2.03
FANCA-221ENST00000566889 TLDC1Q6P9B6 456 aa27.72■■■□□ 2.03
FANCA-221ENST00000566889 FAM228AQ86W67 206 aa27.72■■■□□ 2.03
FANCA-221ENST00000566889 IFT81Q8WYA0 676 aa27.72■■■□□ 2.03
FANCA-221ENST00000566889 PLCB1Q9NQ66 1216 aa27.72■■■□□ 2.03
FANCA-221ENST00000566889 SMARCAL1Q9NZC9 954 aa27.72■■■□□ 2.03
FANCA-221ENST00000566889 TPX2Q9ULW0 747 aaKnown RBP27.72■■■□□ 2.03
FANCA-221ENST00000566889 FER1L4A9Z1Z3 1794 aa27.72■■■□□ 2.03
FANCA-221ENST00000566889 MYH2Q9UKX2 1941 aa27.72■■■□□ 2.03
FANCA-221ENST00000566889 ANKRD18BA2A2Z9 1011 aa27.72■■■□□ 2.03
FANCA-221ENST00000566889 GRID2IPA4D2P6 1211 aa27.72■■■□□ 2.03
FANCA-221ENST00000566889 ATP2B2Q01814 1243 aa27.72■■■□□ 2.03
FANCA-221ENST00000566889 FUT2Q10981 343 aa27.72■■■□□ 2.03
FANCA-221ENST00000566889 OSBPL7Q9BZF2 842 aa27.72■■■□□ 2.03
FANCA-221ENST00000566889 PPANQ9NQ55 473 aaKnown RBP27.72■■■□□ 2.03
FANCA-221ENST00000566889 RBM28Q9NW13 759 aaKnown RBP27.72■■■□□ 2.03
FANCA-221ENST00000566889 ARHGAP20Q9P2F6 1191 aa27.72■■■□□ 2.03
FANCA-221ENST00000566889 TRAPPC3O43617 180 aa27.71■■■□□ 2.03
FANCA-221ENST00000566889 PDHBP11177 359 aa27.71■■■□□ 2.03
FANCA-221ENST00000566889 CLNS1AP54105 237 aaKnown RBP27.71■■■□□ 2.03
FANCA-221ENST00000566889 PPP2R5AQ15172 486 aa27.71■■■□□ 2.03
FANCA-221ENST00000566889 IL17AQ16552 155 aa27.71■■■□□ 2.03
FANCA-221ENST00000566889 NOX5Q96PH1 765 aa27.71■■■□□ 2.03
FANCA-221ENST00000566889 TRIM6Q9C030 488 aaPredicted RBP27.71■■■□□ 2.03
FANCA-221ENST00000566889 EHD2Q9NZN4 543 aa27.71■■■□□ 2.03
FANCA-221ENST00000566889 C5orf60A6NFR6 353 aa27.71■■■□□ 2.03
FANCA-221ENST00000566889 TYW1BQ6NUM6 668 aa27.71■■■□□ 2.03
FANCA-221ENST00000566889 DUSP9Q99956 384 aaKnown RBP27.71■■■□□ 2.03
FANCA-221ENST00000566889 PPP1R2P41236 205 aa27.7■■■□□ 2.02
FANCA-221ENST00000566889 SLC8A3P57103 927 aa27.7■■■□□ 2.02
FANCA-221ENST00000566889 NPY5RQ15761 445 aa27.7■■■□□ 2.02
FANCA-221ENST00000566889 MAATS1Q7Z4T9 603 aa27.7■■■□□ 2.02
FANCA-221ENST00000566889 CNOT6LQ96LI5 555 aaKnown RBP27.7■■■□□ 2.02
FANCA-221ENST00000566889 PSMB7Q99436 277 aa27.7■■■□□ 2.02
FANCA-221ENST00000566889 NOC4LQ9BVI4 516 aaKnown RBP27.7■■■□□ 2.02
FANCA-221ENST00000566889 DISC1Q9NRI5 854 aa27.7■■■□□ 2.02
FANCA-221ENST00000566889 PLAAQ9Y263 795 aa27.7■■■□□ 2.02
FANCA-221ENST00000566889 GCOM1H8Y6P7 765 aaPredicted RBP27.69■■■□□ 2.02
FANCA-221ENST00000566889 DNM1LO00429 736 aa27.69■■■□□ 2.02
FANCA-221ENST00000566889 PRDM1O75626 825 aa27.69■■■□□ 2.02
FANCA-221ENST00000566889 PLEKP08567 350 aaPredicted RBP27.69■■■□□ 2.02
FANCA-221ENST00000566889 MYZAPP0CAP1 466 aa27.69■■■□□ 2.02
FANCA-221ENST00000566889 GHRP10912 638 aa27.69■■■□□ 2.02
FANCA-221ENST00000566889 MTIF2P46199 727 aaKnown RBP27.69■■■□□ 2.02
FANCA-221ENST00000566889 BIRC3Q13489 604 aa27.69■■■□□ 2.02
FANCA-221ENST00000566889 SEC23AQ15436 765 aa27.69■■■□□ 2.02
FANCA-221ENST00000566889 CDC37Q16543 378 aaPredicted RBP27.69■■■□□ 2.02
FANCA-221ENST00000566889 POLD4Q9HCU8 107 aa27.69■■■□□ 2.02
FANCA-221ENST00000566889 KLRC4O43908 158 aa27.69■■■□□ 2.02
FANCA-221ENST00000566889 AKR1B10O60218 316 aa27.69■■■□□ 2.02
FANCA-221ENST00000566889 CCNE1P24864 410 aa27.69■■■□□ 2.02
FANCA-221ENST00000566889 MAGEA1P43355 309 aa27.69■■■□□ 2.02
FANCA-221ENST00000566889 IRX1P78414 480 aaPredicted RBP27.69■■■□□ 2.02
FANCA-221ENST00000566889 MAP3K12Q12852 859 aa27.69■■■□□ 2.02
FANCA-221ENST00000566889 KLHDC7AQ5VTJ3 777 aa27.69■■■□□ 2.02
FANCA-221ENST00000566889 C2CD5Q86YS7 1000 aa27.69■■■□□ 2.02
FANCA-221ENST00000566889 SCLT1Q96NL6 688 aa27.69■■■□□ 2.02
FANCA-221ENST00000566889 HAUS2Q9NVX0 235 aa27.69■■■□□ 2.02
FANCA-221ENST00000566889 V9GY48 417 aaPredicted RBP27.69■■■□□ 2.02
FANCA-221ENST00000566889 MGRN1O60291 552 aa27.68■■■□□ 2.02
FANCA-221ENST00000566889 RTN2O75298 545 aa27.68■■■□□ 2.02
FANCA-221ENST00000566889 DNAJC8O75937 253 aaPredicted RBP27.68■■■□□ 2.02
FANCA-221ENST00000566889 NEBLO76041 1014 aa27.68■■■□□ 2.02
FANCA-221ENST00000566889 PCCAP05165 728 aaPredicted RBP27.68■■■□□ 2.02
FANCA-221ENST00000566889 EIF4A3P38919 411 aaKnown RBP27.68■■■□□ 2.02
FANCA-221ENST00000566889 GUCY2FP51841 1108 aa27.68■■■□□ 2.02
FANCA-221ENST00000566889 MIIPQ5JXC2 388 aa27.68■■■□□ 2.02
FANCA-221ENST00000566889 CACNA2D3Q8IZS8 1091 aa27.68■■■□□ 2.02
FANCA-221ENST00000566889 CASKIN2Q8WXE0 1202 aa27.68■■■□□ 2.02
FANCA-221ENST00000566889 ARMT1Q9H993 441 aa27.68■■■□□ 2.02
FANCA-221ENST00000566889 NLRP2Q9NX02 1062 aa27.68■■■□□ 2.02
FANCA-221ENST00000566889 SLC12A6Q9UHW9 1150 aa27.68■■■□□ 2.02
FANCA-221ENST00000566889 EPB41L3Q9Y2J2 1087 aaPredicted RBP27.68■■■□□ 2.02
FANCA-221ENST00000566889 MEGF6O75095 1541 aa27.68■■■□□ 2.02
FANCA-221ENST00000566889 NCK2O43639 380 aa27.68■■■□□ 2.02
FANCA-221ENST00000566889 SCTRP47872 440 aa27.68■■■□□ 2.02
FANCA-221ENST00000566889 TRIM28Q13263 835 aaKnown RBP27.68■■■□□ 2.02
FANCA-221ENST00000566889 LDHAL6AQ6ZMR3 332 aa27.68■■■□□ 2.02
FANCA-221ENST00000566889 RUFY4Q6ZNE9 571 aa27.68■■■□□ 2.02
FANCA-221ENST00000566889 P2RX5Q93086 422 aa27.68■■■□□ 2.02
FANCA-221ENST00000566889 RGPD5Q99666 1765 aa27.68■■■□□ 2.02
FANCA-221ENST00000566889 PAEPP09466 180 aa27.67■■■□□ 2.02
FANCA-221ENST00000566889 TTLL11Q8NHH1 800 aa27.67■■■□□ 2.02
FANCA-221ENST00000566889 SEC16BQ96JE7 1060 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms