RNA–Protein interactions for RNA: ENST00000566723.1

SMPD3-208, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-208ENST00000566723 FAM126BQ8IXS8 530 aa17.81■□□□□ 0.44
SMPD3-208ENST00000566723 SLC17A8Q8NDX2 589 aa17.81■□□□□ 0.44
SMPD3-208ENST00000566723 CTNNA3Q9UI47 895 aa17.81■□□□□ 0.44
SMPD3-208ENST00000566723 SCN10AQ9Y5Y9 1956 aa17.8■□□□□ 0.44
SMPD3-208ENST00000566723 TLR3O15455 904 aaKnown RBP17.8■□□□□ 0.44
SMPD3-208ENST00000566723 DYNC1LI2O43237 492 aaPredicted RBP17.8■□□□□ 0.44
SMPD3-208ENST00000566723 ZEB2O60315 1214 aa17.8■□□□□ 0.44
SMPD3-208ENST00000566723 CALML3P27482 149 aa17.8■□□□□ 0.44
SMPD3-208ENST00000566723 PDE4AP27815 886 aa17.8■□□□□ 0.44
SMPD3-208ENST00000566723 RPS6P62753 249 aaKnown RBP17.8■□□□□ 0.44
SMPD3-208ENST00000566723 TTC22Q5TAA0 569 aa17.8■□□□□ 0.44
SMPD3-208ENST00000566723 RNF207Q6ZRF8 634 aa17.8■□□□□ 0.44
SMPD3-208ENST00000566723 KIAA1211Q6ZU35 1233 aa17.8■□□□□ 0.44
SMPD3-208ENST00000566723 ENAHQ8N8S7 591 aaPredicted RBP17.8■□□□□ 0.44
SMPD3-208ENST00000566723 SLC43A3Q8NBI5 491 aa17.8■□□□□ 0.44
SMPD3-208ENST00000566723 ANKS1AQ92625 1134 aa17.8■□□□□ 0.44
SMPD3-208ENST00000566723 FAM161BQ96MY7 647 aa17.8■□□□□ 0.44
SMPD3-208ENST00000566723 GUCD1Q96NT3 240 aa17.8■□□□□ 0.44
SMPD3-208ENST00000566723 ZSCAN10Q96SZ4 725 aaPredicted RBP17.8■□□□□ 0.44
SMPD3-208ENST00000566723 KRT23Q9C075 422 aa17.8■□□□□ 0.44
SMPD3-208ENST00000566723 IL25Q9H293 177 aa17.8■□□□□ 0.44
SMPD3-208ENST00000566723 KAT14Q9H8E8 782 aa17.8■□□□□ 0.44
SMPD3-208ENST00000566723 TNKSO95271 1327 aa17.79■□□□□ 0.44
SMPD3-208ENST00000566723 RAD50Q92878 1312 aa17.79■□□□□ 0.44
SMPD3-208ENST00000566723 GSPT1P15170 499 aaKnown RBP17.79■□□□□ 0.44
SMPD3-208ENST00000566723 USH1GQ495M9 461 aa17.79■□□□□ 0.44
SMPD3-208ENST00000566723 DUSP28Q4G0W2 176 aa17.79■□□□□ 0.44
SMPD3-208ENST00000566723 ASPRV1Q53RT3 343 aa17.79■□□□□ 0.44
SMPD3-208ENST00000566723 TMEM63BQ5T3F8 832 aa17.79■□□□□ 0.44
SMPD3-208ENST00000566723 MFSD5Q6N075 450 aa17.79■□□□□ 0.44
SMPD3-208ENST00000566723 CPVLQ9H3G5 476 aa17.79■□□□□ 0.44
SMPD3-208ENST00000566723 CNNM2Q9H8M5 875 aa17.79■□□□□ 0.44
SMPD3-208ENST00000566723 ZSWIM5Q9P217 1185 aa17.79■□□□□ 0.44
SMPD3-208ENST00000566723 CD4P01730 458 aa17.78■□□□□ 0.44
SMPD3-208ENST00000566723 EDNRBP24530 442 aa17.78■□□□□ 0.44
SMPD3-208ENST00000566723 PPIGQ13427 754 aaKnown RBP eCLIP17.78■□□□□ 0.44
SMPD3-208ENST00000566723 CDC37Q16543 378 aaPredicted RBP17.78■□□□□ 0.44
SMPD3-208ENST00000566723 DNERQ8NFT8 737 aa17.78■□□□□ 0.44
SMPD3-208ENST00000566723 MPHOSPH6Q99547 160 aaKnown RBP17.78■□□□□ 0.44
SMPD3-208ENST00000566723 UBA5Q9GZZ9 404 aa17.78■□□□□ 0.44
SMPD3-208ENST00000566723 MYO9BQ13459 2157 aa17.78■□□□□ 0.44
SMPD3-208ENST00000566723 RBM47A0AV96 593 aaKnown RBP17.77■□□□□ 0.44
SMPD3-208ENST00000566723 PDE4DQ08499 809 aa17.77■□□□□ 0.44
SMPD3-208ENST00000566723 ITGA7Q13683 1181 aa17.77■□□□□ 0.44
SMPD3-208ENST00000566723 UBAC1Q9BSL1 405 aa17.77■□□□□ 0.44
SMPD3-208ENST00000566723 SEZ6LQ9BYH1 1024 aa17.77■□□□□ 0.44
SMPD3-208ENST00000566723 WDR11Q9BZH6 1224 aa17.77■□□□□ 0.44
SMPD3-208ENST00000566723 PPP1R12CQ9BZL4 782 aa17.77■□□□□ 0.44
SMPD3-208ENST00000566723 GBF1Q92538 1859 aa17.77■□□□□ 0.43
SMPD3-208ENST00000566723 GRIN2DO15399 1336 aa17.76■□□□□ 0.43
SMPD3-208ENST00000566723 ABCB11O95342 1321 aa17.76■□□□□ 0.43
SMPD3-208ENST00000566723 PRUNE2Q8WUY3 3088 aa17.76■□□□□ 0.43
SMPD3-208ENST00000566723 BAZ2BQ9UIF8 2168 aaKnown RBP17.76■□□□□ 0.43
SMPD3-208ENST00000566723 ADGRF4Q8IZF3 695 aa17.76■□□□□ 0.43
SMPD3-208ENST00000566723 TMEM199Q8N511 208 aa17.76■□□□□ 0.43
SMPD3-208ENST00000566723 RGS22Q8NE09 1264 aa17.76■□□□□ 0.43
SMPD3-208ENST00000566723 MAF1Q9H063 256 aa17.76■□□□□ 0.43
SMPD3-208ENST00000566723 TMEM265A0A087WTH1 108 aa17.75■□□□□ 0.43
SMPD3-208ENST00000566723 B4DLN1 442 aa17.75■□□□□ 0.43
SMPD3-208ENST00000566723 PARP1P09874 1014 aaKnown RBP17.75■□□□□ 0.43
SMPD3-208ENST00000566723 CSF2RAP15509 400 aa17.75■□□□□ 0.43
SMPD3-208ENST00000566723 CPT1AP50416 773 aa17.75■□□□□ 0.43
SMPD3-208ENST00000566723 MRPL12P52815 198 aaKnown RBP17.75■□□□□ 0.43
SMPD3-208ENST00000566723 PPP2R5BQ15173 497 aa17.75■□□□□ 0.43
SMPD3-208ENST00000566723 IFIT1BQ5T764 474 aaKnown RBP17.75■□□□□ 0.43
SMPD3-208ENST00000566723 OR6J1Q8NGC5 347 aa17.75■□□□□ 0.43
SMPD3-208ENST00000566723 SCFD2Q8WU76 684 aa17.75■□□□□ 0.43
SMPD3-208ENST00000566723 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.75■□□□□ 0.43
SMPD3-208ENST00000566723 TTYH1Q9H313 450 aaPredicted RBP17.75■□□□□ 0.43
SMPD3-208ENST00000566723 CUL9Q8IWT3 2517 aa17.75■□□□□ 0.43
SMPD3-208ENST00000566723 TANC1Q9C0D5 1861 aa17.74■□□□□ 0.43
SMPD3-208ENST00000566723 NKRFO15226 690 aaKnown RBP eCLIP17.74■□□□□ 0.43
SMPD3-208ENST00000566723 DHX16O60231 1041 aaKnown RBP17.74■□□□□ 0.43
SMPD3-208ENST00000566723 PSMC6P62333 389 aa17.74■□□□□ 0.43
SMPD3-208ENST00000566723 QRICH1Q2TAL8 776 aa17.74■□□□□ 0.43
SMPD3-208ENST00000566723 TMEM240Q5SV17 173 aa17.74■□□□□ 0.43
SMPD3-208ENST00000566723 PSRC1Q6PGN9 363 aaPredicted RBP17.74■□□□□ 0.43
SMPD3-208ENST00000566723 RUFY2Q8WXA3 655 aa17.74■□□□□ 0.43
SMPD3-208ENST00000566723 SEMA6BQ9H3T3 888 aa17.74■□□□□ 0.43
SMPD3-208ENST00000566723 HIPK3Q9H422 1215 aa17.74■□□□□ 0.43
SMPD3-208ENST00000566723 POLR3EQ9NVU0 708 aa17.74■□□□□ 0.43
SMPD3-208ENST00000566723 MYH7BA7E2Y1 1941 aa17.74■□□□□ 0.43
SMPD3-208ENST00000566723 SCN5AQ14524 2016 aa17.73■□□□□ 0.43
SMPD3-208ENST00000566723 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.73■□□□□ 0.43
SMPD3-208ENST00000566723 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.73■□□□□ 0.43
SMPD3-208ENST00000566723 B4GALT4O60513 344 aa17.73■□□□□ 0.43
SMPD3-208ENST00000566723 CHMLP26374 656 aa17.73■□□□□ 0.43
SMPD3-208ENST00000566723 CYP2C18P33260 490 aa17.73■□□□□ 0.43
SMPD3-208ENST00000566723 IRX6P78412 446 aaPredicted RBP17.73■□□□□ 0.43
SMPD3-208ENST00000566723 PURAQ00577 322 aaKnown RBP17.73■□□□□ 0.43
SMPD3-208ENST00000566723 SEC23AQ15436 765 aa17.73■□□□□ 0.43
SMPD3-208ENST00000566723 C16orf59Q7L2K0 433 aa17.73■□□□□ 0.43
SMPD3-208ENST00000566723 CDX2Q99626 313 aaPredicted RBP17.73■□□□□ 0.43
SMPD3-208ENST00000566723 JMJD4Q9H9V9 463 aa17.73■□□□□ 0.43
SMPD3-208ENST00000566723 MYL3P08590 195 aa17.72■□□□□ 0.43
SMPD3-208ENST00000566723 DNAJB2P25686 324 aa17.72■□□□□ 0.43
SMPD3-208ENST00000566723 TRDNQ13061 729 aa17.72■□□□□ 0.43
SMPD3-208ENST00000566723 BRDTQ58F21 947 aaPredicted RBP17.72■□□□□ 0.43
SMPD3-208ENST00000566723 RASIP1Q5U651 963 aa17.72■□□□□ 0.43
SMPD3-208ENST00000566723 CYB5R4Q7L1T6 521 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms