RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 PREPP48147 710 aa4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 SCNN1BP51168 640 aa4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 ZNF252P-AS1Q0IIN9 211 aa4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 STK3Q13188 491 aa4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 GRB10Q13322 594 aa4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 INPP5AQ14642 412 aa4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 MSMPQ1L6U9 139 aa4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 TMEM95Q3KNT9 176 aa4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 MINDY4Q4G0A6 757 aa4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 L1TD1Q5T7N2 865 aaKnown RBP4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 HEATR6Q6AI08 1181 aaKnown RBP4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 LRFN4Q6PJG9 635 aa4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 ADAT2Q7Z6V5 191 aaKnown RBP4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 PNMA8AQ86V59 439 aaPredicted RBP4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 PPFIBP1Q86W92 1011 aa4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 PHACTR4Q8IZ21 702 aa4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 PDILTQ8N807 584 aa4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 GPBAR1Q8TDU6 330 aa4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 POP1Q99575 1024 aaKnown RBP4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 ELAC2Q9BQ52 826 aaKnown RBP4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 PAGR1Q9BTK6 254 aa4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 CARD10Q9BWT7 1032 aa4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 MTFR1LQ9H019 292 aa4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 CNNM2Q9H8M5 875 aa4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 CRTAC1Q9NQ79 661 aa4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 LUZP4Q9P127 313 aa4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 DDX20Q9UHI6 824 aaKnown RBP4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 APOBEC2Q9Y235 224 aaKnown RBP4.15□□□□□ -1.75
HERPUD1-211ENST00000566550 ZNF891A8MT65 544 aaPredicted RBP4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 DCDC2CA8MYV0 355 aa4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 CHURC1-FNTBB4DL54 471 aa4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 TNFRSF10CO14798 259 aa4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 PMM2O15305 246 aa4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 ASLP04424 464 aa4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 F13BP05160 661 aa4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 HSP90AA1P07900 732 aaKnown RBP4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 GSTP1P09211 210 aaKnown RBP4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 HALP42357 657 aa4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 USP11P51784 963 aa4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 PIP4K2BP78356 416 aa4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 CHAF1AQ13111 956 aaPredicted RBP4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 SAFBQ15424 915 aaKnown RBP eCLIP4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 NFKBIBQ15653 356 aa4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 BBS9Q3SYG4 887 aa4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 DUSP27Q5VZP5 1158 aa4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 CCDC70Q6NSX1 233 aa4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 UBE2R2Q712K3 238 aaPredicted RBP4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 HDXQ7Z353 690 aa4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 PCGF5Q86SE9 256 aa4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 SMAP1Q8IYB5 467 aaPredicted RBP4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 NXPE1Q8N323 547 aa4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 UBASH3BQ8TF42 649 aa4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 OSBP2Q969R2 916 aa4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 SLC6A18Q96N87 628 aa4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 GPR101Q96P66 508 aaPredicted RBP4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 CAMKK2Q96RR4 588 aa4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 STRBPQ96SI9 672 aaKnown RBP4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 HAUS7Q99871 368 aa4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 YIPF2Q9BWQ6 316 aa4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 PLCB1Q9NQ66 1216 aa4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 ANLNQ9NQW6 1124 aa4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 SPEF1Q9Y4P9 236 aa4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 CSADQ9Y600 493 aa4.14□□□□□ -1.75
HERPUD1-211ENST00000566550 FAM95CA0A1B0GW59 222 aa4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 DYTNA2CJ06 578 aa4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 NPTXRO95502 500 aa4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 IL33O95760 270 aa4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 C6orf222P0C671 652 aaPredicted RBP4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 U2AF1L5P0DN76 240 aaPredicted RBP4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 MYBP10242 640 aa4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 FGFR1P11362 822 aa4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 KCNJ6P48051 423 aa4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 U2AF1Q01081 240 aaKnown RBP eCLIP4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 GSTM4Q03013 218 aa4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 PDE4BQ07343 736 aa4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 IKBKEQ14164 716 aa4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 PCBP2Q15366 365 aaKnown RBP eCLIP4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 ZNF124Q15973 351 aa4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 ALFQ53S48 1182 aa4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 NUTM2GQ5VZR2 741 aa4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 INTS3Q68E01 1043 aaKnown RBP4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 CDCA2Q69YH5 1023 aaPredicted RBP4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 XRRA1Q6P2D8 792 aa4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 VN1R5Q7Z5H4 357 aa4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 PDZD3Q86UT5 571 aa4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 ZNF354CQ86Y25 554 aa4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 IFNL2Q8IZJ0 200 aa4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 TEX19Q8NA77 164 aa4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 FAM13CQ8NE31 585 aa4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 ADCY4Q8NFM4 1077 aa4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 DDX54Q8TDD1 881 aaKnown RBP4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 KLHDC7BQ96G42 594 aa4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 FUBP3Q96I24 572 aaKnown RBP eCLIP4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 TNIP3Q96KP6 325 aa4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 MAGEB10Q96LZ2 347 aaPredicted RBP4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 INO80BQ9C086 356 aaPredicted RBP4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 CYP4F12Q9HCS2 524 aa4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 PICK1Q9NRD5 415 aa4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 SH2B1Q9NRF2 756 aaPredicted RBP4.13□□□□□ -1.75
HERPUD1-211ENST00000566550 TRAF6Q9Y4K3 522 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms