RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 SELENOOQ9BVL4 669 aa24.07■■□□□ 1.44
SPSB3-208ENST00000566339 RNF14Q9UBS8 474 aa24.07■■□□□ 1.44
SPSB3-208ENST00000566339 OPA1O60313 960 aa24.06■■□□□ 1.44
SPSB3-208ENST00000566339 EPB41P11171 864 aaKnown RBP24.06■■□□□ 1.44
SPSB3-208ENST00000566339 NNTQ13423 1086 aa24.06■■□□□ 1.44
SPSB3-208ENST00000566339 GLE1Q53GS7 698 aaKnown RBP24.06■■□□□ 1.44
SPSB3-208ENST00000566339 RCSD1Q6JBY9 416 aa24.06■■□□□ 1.44
SPSB3-208ENST00000566339 CNNM4Q6P4Q7 775 aa24.06■■□□□ 1.44
SPSB3-208ENST00000566339 TSKSQ9UJT2 592 aa24.06■■□□□ 1.44
SPSB3-208ENST00000566339 PLAGL2Q9UPG8 496 aa24.06■■□□□ 1.44
SPSB3-208ENST00000566339 B4DLN1 442 aa24.06■■□□□ 1.44
SPSB3-208ENST00000566339 ENC1O14682 589 aa24.06■■□□□ 1.44
SPSB3-208ENST00000566339 IDEP14735 1019 aa24.06■■□□□ 1.44
SPSB3-208ENST00000566339 ALS2CLQ60I27 953 aa24.06■■□□□ 1.44
SPSB3-208ENST00000566339 CLEC4GQ6UXB4 293 aa24.06■■□□□ 1.44
SPSB3-208ENST00000566339 RASSF8Q8NHQ8 419 aa24.06■■□□□ 1.44
SPSB3-208ENST00000566339 CNOT6LQ96LI5 555 aaKnown RBP24.06■■□□□ 1.44
SPSB3-208ENST00000566339 HDAC6Q9UBN7 1215 aa24.06■■□□□ 1.44
SPSB3-208ENST00000566339 RSPH14Q9UHP6 348 aa24.06■■□□□ 1.44
SPSB3-208ENST00000566339 COL24A1Q17RW2 1714 aa24.05■■□□□ 1.44
SPSB3-208ENST00000566339 CYP2D7A0A087X1C5 515 aa24.05■■□□□ 1.44
SPSB3-208ENST00000566339 RASSF10A6NK89 507 aa24.05■■□□□ 1.44
SPSB3-208ENST00000566339 TSPY2A6NKD2 308 aa24.05■■□□□ 1.44
SPSB3-208ENST00000566339 COBLO75128 1261 aa24.05■■□□□ 1.44
SPSB3-208ENST00000566339 ATP6V1AP38606 617 aa24.05■■□□□ 1.44
SPSB3-208ENST00000566339 PPFIA1Q13136 1202 aa24.05■■□□□ 1.44
SPSB3-208ENST00000566339 EMBQ6PCB8 327 aa24.05■■□□□ 1.44
SPSB3-208ENST00000566339 KRT25Q7Z3Z0 450 aa24.05■■□□□ 1.44
SPSB3-208ENST00000566339 ACSBG1Q96GR2 724 aa24.05■■□□□ 1.44
SPSB3-208ENST00000566339 CCDC42Q96M95 316 aa24.05■■□□□ 1.44
SPSB3-208ENST00000566339 PCDHA6Q9UN73 950 aa24.05■■□□□ 1.44
SPSB3-208ENST00000566339 PCDHA8Q9Y5H6 950 aa24.05■■□□□ 1.44
SPSB3-208ENST00000566339 ROBO3Q96MS0 1386 aa24.05■■□□□ 1.44
SPSB3-208ENST00000566339 TRIM66O15016 1216 aa24.04■■□□□ 1.44
SPSB3-208ENST00000566339 PJA2O43164 708 aa24.04■■□□□ 1.44
SPSB3-208ENST00000566339 GYG1P46976 350 aa24.04■■□□□ 1.44
SPSB3-208ENST00000566339 APBA1Q02410 837 aa24.04■■□□□ 1.44
SPSB3-208ENST00000566339 CCDC84Q86UT8 332 aaPredicted RBP24.04■■□□□ 1.44
SPSB3-208ENST00000566339 FAM84BQ96KN1 310 aaPredicted RBP24.04■■□□□ 1.44
SPSB3-208ENST00000566339 ALS2CR12Q96Q35 445 aa24.04■■□□□ 1.44
SPSB3-208ENST00000566339 SH3GL2Q99962 352 aa24.04■■□□□ 1.44
SPSB3-208ENST00000566339 TRIM9Q9C026 710 aa24.04■■□□□ 1.44
SPSB3-208ENST00000566339 MAPK8IP1Q9UQF2 711 aa24.04■■□□□ 1.44
SPSB3-208ENST00000566339 NIP7Q9Y221 180 aaKnown RBP eCLIP24.04■■□□□ 1.44
SPSB3-208ENST00000566339 FAM205AQ6ZU69 1335 aa24.04■■□□□ 1.44
SPSB3-208ENST00000566339 GOLGA6BA6NDN3 693 aa24.03■■□□□ 1.44
SPSB3-208ENST00000566339 KCNQ2O43526 872 aa24.03■■□□□ 1.44
SPSB3-208ENST00000566339 MTIF2P46199 727 aaKnown RBP24.03■■□□□ 1.44
SPSB3-208ENST00000566339 NOC4LQ9BVI4 516 aaKnown RBP24.03■■□□□ 1.44
SPSB3-208ENST00000566339 LACRTQ9GZZ8 138 aa24.03■■□□□ 1.44
SPSB3-208ENST00000566339 SH2D4AQ9H788 454 aa24.03■■□□□ 1.44
SPSB3-208ENST00000566339 AGPAT5Q9NUQ2 364 aa24.03■■□□□ 1.44
SPSB3-208ENST00000566339 BARHL2Q9NY43 387 aa24.03■■□□□ 1.44
SPSB3-208ENST00000566339 HYOU1Q9Y4L1 999 aa24.03■■□□□ 1.44
SPSB3-208ENST00000566339 A0A087WUV0 522 aaPredicted RBP24.03■■□□□ 1.44
SPSB3-208ENST00000566339 PES1O00541 588 aaKnown RBP24.03■■□□□ 1.44
SPSB3-208ENST00000566339 SMARCA1P28370 1054 aa24.03■■□□□ 1.44
SPSB3-208ENST00000566339 EPHB4P54760 987 aa24.03■■□□□ 1.44
SPSB3-208ENST00000566339 MIIPQ5JXC2 388 aa24.03■■□□□ 1.44
SPSB3-208ENST00000566339 CABP7Q86V35 215 aa24.03■■□□□ 1.44
SPSB3-208ENST00000566339 CREG2Q8IUH2 290 aa24.03■■□□□ 1.44
SPSB3-208ENST00000566339 ZNF384Q8TF68 577 aa24.03■■□□□ 1.44
SPSB3-208ENST00000566339 CAVIN3Q969G5 261 aa24.03■■□□□ 1.44
SPSB3-208ENST00000566339 TAF1P21675 1872 aa24.03■■□□□ 1.44
SPSB3-208ENST00000566339 FLT1P17948 1338 aa24.03■■□□□ 1.44
SPSB3-208ENST00000566339 AGPSO00116 658 aa24.02■■□□□ 1.44
SPSB3-208ENST00000566339 PHACTR2O75167 634 aa24.02■■□□□ 1.44
SPSB3-208ENST00000566339 GGCXP38435 758 aa24.02■■□□□ 1.44
SPSB3-208ENST00000566339 TTC31Q49AM3 519 aaPredicted RBP24.02■■□□□ 1.44
SPSB3-208ENST00000566339 RNF10Q8N5U6 811 aaKnown RBP24.02■■□□□ 1.44
SPSB3-208ENST00000566339 JADE2Q9NQC1 790 aa24.02■■□□□ 1.44
SPSB3-208ENST00000566339 PVALEFA0A1B0GWK0 134 aa24.01■■□□□ 1.43
SPSB3-208ENST00000566339 GOLGA6CA6NDK9 693 aa24.01■■□□□ 1.43
SPSB3-208ENST00000566339 SMIM22K7EJ46 135 aa24.01■■□□□ 1.43
SPSB3-208ENST00000566339 OR52Z1P0C646 297 aa24.01■■□□□ 1.43
SPSB3-208ENST00000566339 GOLGA6DP0CG33 693 aa24.01■■□□□ 1.43
SPSB3-208ENST00000566339 NOP2P46087 812 aaKnown RBP24.01■■□□□ 1.43
SPSB3-208ENST00000566339 PDE4DQ08499 809 aa24.01■■□□□ 1.43
SPSB3-208ENST00000566339 SPTY2D1Q68D10 685 aaPredicted RBP24.01■■□□□ 1.43
SPSB3-208ENST00000566339 CENPPQ6IPU0 288 aa24.01■■□□□ 1.43
SPSB3-208ENST00000566339 NUCKS1Q9H1E3 243 aaKnown RBP24.01■■□□□ 1.43
SPSB3-208ENST00000566339 GOLGA6AQ9NYA3 693 aa24.01■■□□□ 1.43
SPSB3-208ENST00000566339 ATXN2Q99700 1313 aaKnown RBP24.01■■□□□ 1.43
SPSB3-208ENST00000566339 SRGAP2O75044 1071 aa24.01■■□□□ 1.43
SPSB3-208ENST00000566339 MECOMQ03112 1051 aa24.01■■□□□ 1.43
SPSB3-208ENST00000566339 R3HDM1Q15032 1099 aaKnown RBP24.01■■□□□ 1.43
SPSB3-208ENST00000566339 ANKRD40Q6AI12 368 aa24.01■■□□□ 1.43
SPSB3-208ENST00000566339 PNMA1Q8ND90 353 aa24.01■■□□□ 1.43
SPSB3-208ENST00000566339 LRRC27Q9C0I9 530 aa24.01■■□□□ 1.43
SPSB3-208ENST00000566339 TMEM60Q9H2L4 133 aa24.01■■□□□ 1.43
SPSB3-208ENST00000566339 STK17AQ9UEE5 414 aa24.01■■□□□ 1.43
SPSB3-208ENST00000566339 MINPP1Q9UNW1 487 aa24.01■■□□□ 1.43
SPSB3-208ENST00000566339 SSU72P8A0A1W2PR75 194 aa24■■□□□ 1.43
SPSB3-208ENST00000566339 RCCD1A6NED2 376 aa24■■□□□ 1.43
SPSB3-208ENST00000566339 STXBP3O00186 592 aa24■■□□□ 1.43
SPSB3-208ENST00000566339 PDE2AO00408 941 aaPredicted RBP24■■□□□ 1.43
SPSB3-208ENST00000566339 CAPZA3Q96KX2 299 aa24■■□□□ 1.43
SPSB3-208ENST00000566339 ZMYND12Q9H0C1 365 aa24■■□□□ 1.43
SPSB3-208ENST00000566339 PCDHA13Q9Y5I0 950 aa24■■□□□ 1.43
SPSB3-208ENST00000566339 PAFAH1B1P43034 410 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms