RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 ZSCAN10Q96SZ4 725 aaPredicted RBP27.85■■■□□ 2.05
RAB40C-209ENST00000565511 CDH23Q9H251 3354 aa27.84■■■□□ 2.05
RAB40C-209ENST00000565511 CD4P01730 458 aa27.84■■■□□ 2.05
RAB40C-209ENST00000565511 PSMC6P62333 389 aa27.84■■■□□ 2.05
RAB40C-209ENST00000565511 RNF207Q6ZRF8 634 aa27.84■■■□□ 2.05
RAB40C-209ENST00000565511 KIAA1211Q6ZU35 1233 aa27.84■■■□□ 2.05
RAB40C-209ENST00000565511 C16orf59Q7L2K0 433 aa27.84■■■□□ 2.05
RAB40C-209ENST00000565511 SLC17A8Q8NDX2 589 aa27.84■■■□□ 2.05
RAB40C-209ENST00000565511 AP5M1Q9H0R1 490 aa27.84■■■□□ 2.05
RAB40C-209ENST00000565511 TTYH1Q9H313 450 aaPredicted RBP27.84■■■□□ 2.05
RAB40C-209ENST00000565511 TNKSO95271 1327 aa27.84■■■□□ 2.05
RAB40C-209ENST00000565511 MROH7Q68CQ1 1323 aa27.84■■■□□ 2.05
RAB40C-209ENST00000565511 CDC37Q16543 378 aaPredicted RBP27.83■■■□□ 2.05
RAB40C-209ENST00000565511 GPATCH4Q5T3I0 446 aaKnown RBP27.83■■■□□ 2.05
RAB40C-209ENST00000565511 TBC1D5Q92609 795 aa27.83■■■□□ 2.05
RAB40C-209ENST00000565511 PPP1R12CQ9BZL4 782 aa27.83■■■□□ 2.05
RAB40C-209ENST00000565511 ADD3Q9UEY8 706 aaKnown RBP27.83■■■□□ 2.05
RAB40C-209ENST00000565511 RBM47A0AV96 593 aaKnown RBP27.82■■■□□ 2.04
RAB40C-209ENST00000565511 IMMTQ16891 758 aaKnown RBP27.82■■■□□ 2.04
RAB40C-209ENST00000565511 DUSP28Q4G0W2 176 aa27.82■■■□□ 2.04
RAB40C-209ENST00000565511 CYB5R4Q7L1T6 521 aa27.82■■■□□ 2.04
RAB40C-209ENST00000565511 IQCA1Q86XH1 822 aa27.82■■■□□ 2.04
RAB40C-209ENST00000565511 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.82■■■□□ 2.04
RAB40C-209ENST00000565511 KAT14Q9H8E8 782 aa27.82■■■□□ 2.04
RAB40C-209ENST00000565511 TAF6LQ9Y6J9 622 aa27.82■■■□□ 2.04
RAB40C-209ENST00000565511 UMODL1Q5DID0 1318 aa27.82■■■□□ 2.04
RAB40C-209ENST00000565511 EDNRBP24530 442 aa27.81■■■□□ 2.04
RAB40C-209ENST00000565511 SMAD3P84022 425 aaKnown RBP27.81■■■□□ 2.04
RAB40C-209ENST00000565511 ZNF697Q5TEC3 545 aa27.81■■■□□ 2.04
RAB40C-209ENST00000565511 MFSD5Q6N075 450 aa27.81■■■□□ 2.04
RAB40C-209ENST00000565511 ADGRF4Q8IZF3 695 aa27.81■■■□□ 2.04
RAB40C-209ENST00000565511 WDR11Q9BZH6 1224 aa27.81■■■□□ 2.04
RAB40C-209ENST00000565511 Q9Y3F1 56 aa27.81■■■□□ 2.04
RAB40C-209ENST00000565511 CSF2RAP15509 400 aa27.8■■■□□ 2.04
RAB40C-209ENST00000565511 CYP2C18P33260 490 aa27.8■■■□□ 2.04
RAB40C-209ENST00000565511 PTH1RQ03431 593 aa27.8■■■□□ 2.04
RAB40C-209ENST00000565511 ITGA7Q13683 1181 aa27.8■■■□□ 2.04
RAB40C-209ENST00000565511 COL20A1Q9P218 1284 aa27.8■■■□□ 2.04
RAB40C-209ENST00000565511 SCN10AQ9Y5Y9 1956 aa27.8■■■□□ 2.04
RAB40C-209ENST00000565511 SEC23AQ15436 765 aa27.79■■■□□ 2.04
RAB40C-209ENST00000565511 STAG2Q8N3U4 1231 aa27.79■■■□□ 2.04
RAB40C-209ENST00000565511 COPS5Q92905 334 aa27.79■■■□□ 2.04
RAB40C-209ENST00000565511 TRPV6Q9H1D0 765 aa27.79■■■□□ 2.04
RAB40C-209ENST00000565511 SEMA6BQ9H3T3 888 aa27.79■■■□□ 2.04
RAB40C-209ENST00000565511 CTNNA3Q9UI47 895 aa27.79■■■□□ 2.04
RAB40C-209ENST00000565511 LOC102724159A0A0B4J2E5 919 aa27.78■■■□□ 2.04
RAB40C-209ENST00000565511 ACRP10323 421 aa27.78■■■□□ 2.04
RAB40C-209ENST00000565511 PWP2Q15269 919 aaKnown RBP27.78■■■□□ 2.04
RAB40C-209ENST00000565511 QRICH1Q2TAL8 776 aa27.78■■■□□ 2.04
RAB40C-209ENST00000565511 ASPRV1Q53RT3 343 aa27.78■■■□□ 2.04
RAB40C-209ENST00000565511 CCDC178Q5BJE1 867 aa27.78■■■□□ 2.04
RAB40C-209ENST00000565511 TMEM240Q5SV17 173 aa27.78■■■□□ 2.04
RAB40C-209ENST00000565511 PPP1R13LQ8WUF5 828 aa27.78■■■□□ 2.04
RAB40C-209ENST00000565511 JMJD4Q9H9V9 463 aa27.78■■■□□ 2.04
RAB40C-209ENST00000565511 CABYRO75952 493 aa27.77■■■□□ 2.04
RAB40C-209ENST00000565511 ARIH2O95376 493 aa27.77■■■□□ 2.04
RAB40C-209ENST00000565511 CHMLP26374 656 aa27.77■■■□□ 2.04
RAB40C-209ENST00000565511 NT5C2P49902 561 aa27.77■■■□□ 2.04
RAB40C-209ENST00000565511 SLC35G1Q2M3R5 365 aa27.77■■■□□ 2.04
RAB40C-209ENST00000565511 CDX2Q99626 313 aaPredicted RBP27.77■■■□□ 2.04
RAB40C-209ENST00000565511 KRT23Q9C075 422 aa27.77■■■□□ 2.04
RAB40C-209ENST00000565511 KIAA1217Q5T5P2 1943 aa27.77■■■□□ 2.04
RAB40C-209ENST00000565511 RAD50Q92878 1312 aa27.76■■■□□ 2.03
RAB40C-209ENST00000565511 TLR3O15455 904 aaKnown RBP27.76■■■□□ 2.03
RAB40C-209ENST00000565511 B4GALT4O60513 344 aa27.76■■■□□ 2.03
RAB40C-209ENST00000565511 PDE4DQ08499 809 aa27.76■■■□□ 2.03
RAB40C-209ENST00000565511 OR6J1Q8NGC5 347 aa27.76■■■□□ 2.03
RAB40C-209ENST00000565511 SYTL5Q8TDW5 730 aaPredicted RBP27.76■■■□□ 2.03
RAB40C-209ENST00000565511 SENP2Q9HC62 589 aa27.76■■■□□ 2.03
RAB40C-209ENST00000565511 PNMA2Q9UL42 364 aa27.76■■■□□ 2.03
RAB40C-209ENST00000565511 BAZ2BQ9UIF8 2168 aaKnown RBP27.76■■■□□ 2.03
RAB40C-209ENST00000565511 EYSQ5T1H1 3165 aa27.76■■■□□ 2.03
RAB40C-209ENST00000565511 GBF1Q92538 1859 aa27.75■■■□□ 2.03
RAB40C-209ENST00000565511 CYP21A2P08686 494 aa27.75■■■□□ 2.03
RAB40C-209ENST00000565511 PARP1P09874 1014 aaKnown RBP27.75■■■□□ 2.03
RAB40C-209ENST00000565511 PURAQ00577 322 aaKnown RBP27.75■■■□□ 2.03
RAB40C-209ENST00000565511 PPIGQ13427 754 aaKnown RBP eCLIP27.75■■■□□ 2.03
RAB40C-209ENST00000565511 RGS22Q8NE09 1264 aa27.75■■■□□ 2.03
RAB40C-209ENST00000565511 DNERQ8NFT8 737 aa27.75■■■□□ 2.03
RAB40C-209ENST00000565511 TAAR1Q96RJ0 339 aa27.75■■■□□ 2.03
RAB40C-209ENST00000565511 UBAC1Q9BSL1 405 aa27.75■■■□□ 2.03
RAB40C-209ENST00000565511 NOC4LQ9BVI4 516 aaKnown RBP27.75■■■□□ 2.03
RAB40C-209ENST00000565511 CNNM2Q9H8M5 875 aa27.75■■■□□ 2.03
RAB40C-209ENST00000565511 VAT1LQ9HCJ6 419 aa27.75■■■□□ 2.03
RAB40C-209ENST00000565511 A0A0C4DFX4 3053 aa27.75■■■□□ 2.03
RAB40C-209ENST00000565511 CUL9Q8IWT3 2517 aa27.75■■■□□ 2.03
RAB40C-209ENST00000565511 ABCB11O95342 1321 aa27.74■■■□□ 2.03
RAB40C-209ENST00000565511 OPLAHO14841 1288 aa27.74■■■□□ 2.03
RAB40C-209ENST00000565511 ZEB2O60315 1214 aa27.74■■■□□ 2.03
RAB40C-209ENST00000565511 PPP1R11O60927 126 aaPredicted RBP27.74■■■□□ 2.03
RAB40C-209ENST00000565511 RASIP1Q5U651 963 aa27.74■■■□□ 2.03
RAB40C-209ENST00000565511 STOX1Q6ZVD7 989 aa27.74■■■□□ 2.03
RAB40C-209ENST00000565511 WNT8AQ9H1J5 351 aa27.74■■■□□ 2.03
RAB40C-209ENST00000565511 UNC80Q8N2C7 3258 aa27.74■■■□□ 2.03
RAB40C-209ENST00000565511 SCN5AQ14524 2016 aa27.74■■■□□ 2.03
RAB40C-209ENST00000565511 GRXCR1A8MXD5 290 aa27.73■■■□□ 2.03
RAB40C-209ENST00000565511 MYL3P08590 195 aa27.73■■■□□ 2.03
RAB40C-209ENST00000565511 IFIT1BQ5T764 474 aaKnown RBP27.73■■■□□ 2.03
RAB40C-209ENST00000565511 ZNF365Q70YC5 407 aa27.73■■■□□ 2.03
RAB40C-209ENST00000565511 MYLIPQ8WY64 445 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms