RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.7■■□□□ 1.06
CLN6-204ENST00000564752 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.7■■□□□ 1.06
CLN6-204ENST00000564752 ZEB2O60315 1214 aa21.7■■□□□ 1.06
CLN6-204ENST00000564752 ALDH5A1P51649 535 aaPredicted RBP21.7■■□□□ 1.06
CLN6-204ENST00000564752 PPIGQ13427 754 aaKnown RBP eCLIP21.7■■□□□ 1.067e-7■□□□□ 9.4
CLN6-204ENST00000564752 DGKHQ86XP1 1220 aa21.7■■□□□ 1.06
CLN6-204ENST00000564752 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.7■■□□□ 1.06
CLN6-204ENST00000564752 COL25A1Q9BXS0 654 aaPredicted RBP21.7■■□□□ 1.06
CLN6-204ENST00000564752 SEZ6LQ9BYH1 1024 aa21.7■■□□□ 1.06
CLN6-204ENST00000564752 TMEM265A0A087WTH1 108 aa21.69■■□□□ 1.06
CLN6-204ENST00000564752 PTPDC1A2A3K4 754 aa21.69■■□□□ 1.06
CLN6-204ENST00000564752 CSF2RAP15509 400 aa21.69■■□□□ 1.06
CLN6-204ENST00000564752 NT5C2P49902 561 aa21.69■■□□□ 1.06
CLN6-204ENST00000564752 ITGA7Q13683 1181 aa21.69■■□□□ 1.06
CLN6-204ENST00000564752 DUSP28Q4G0W2 176 aa21.69■■□□□ 1.06
CLN6-204ENST00000564752 TMEM240Q5SV17 173 aa21.69■■□□□ 1.06
CLN6-204ENST00000564752 TMEM199Q8N511 208 aa21.69■■□□□ 1.06
CLN6-204ENST00000564752 GRIN2DO15399 1336 aa21.69■■□□□ 1.06
CLN6-204ENST00000564752 NEDD4P46934 1319 aa21.69■■□□□ 1.06
CLN6-204ENST00000564752 EYSQ5T1H1 3165 aa21.69■■□□□ 1.06
CLN6-204ENST00000564752 RBM47A0AV96 593 aaKnown RBP21.68■■□□□ 1.06
CLN6-204ENST00000564752 GPATCH4Q5T3I0 446 aaKnown RBP21.68■■□□□ 1.06
CLN6-204ENST00000564752 ZKSCAN3Q9BRR0 538 aa21.68■■□□□ 1.06
CLN6-204ENST00000564752 DSCC1Q9BVC3 393 aa21.68■■□□□ 1.06
CLN6-204ENST00000564752 PPP1R12CQ9BZL4 782 aa21.68■■□□□ 1.06
CLN6-204ENST00000564752 WDR19Q8NEZ3 1342 aa21.68■■□□□ 1.06
CLN6-204ENST00000564752 CALML3P27482 149 aa21.67■■□□□ 1.06
CLN6-204ENST00000564752 CCDC178Q5BJE1 867 aa21.67■■□□□ 1.06
CLN6-204ENST00000564752 SLC30A10Q6XR72 485 aa21.67■■□□□ 1.06
CLN6-204ENST00000564752 RNF207Q6ZRF8 634 aa21.67■■□□□ 1.06
CLN6-204ENST00000564752 ANKS1AQ92625 1134 aa21.67■■□□□ 1.06
CLN6-204ENST00000564752 WDR11Q9BZH6 1224 aa21.67■■□□□ 1.06
CLN6-204ENST00000564752 RAD50Q92878 1312 aa21.66■■□□□ 1.06
CLN6-204ENST00000564752 GOLGA8HP0CJ92 632 aa21.66■■□□□ 1.06
CLN6-204ENST00000564752 CYP2C18P33260 490 aa21.66■■□□□ 1.06
CLN6-204ENST00000564752 RPS6P62753 249 aaKnown RBP21.66■■□□□ 1.06
CLN6-204ENST00000564752 RASIP1Q5U651 963 aa21.66■■□□□ 1.06
CLN6-204ENST00000564752 MYLIPQ8WY64 445 aa21.66■■□□□ 1.06
CLN6-204ENST00000564752 UBA5Q9GZZ9 404 aa21.66■■□□□ 1.06
CLN6-204ENST00000564752 KDM4AO75164 1064 aa21.65■■□□□ 1.06
CLN6-204ENST00000564752 ACRP10323 421 aa21.65■■□□□ 1.06
CLN6-204ENST00000564752 EDNRBP24530 442 aa21.65■■□□□ 1.06
CLN6-204ENST00000564752 PSMC6P62333 389 aa21.65■■□□□ 1.06
CLN6-204ENST00000564752 ZNF365Q70YC5 407 aa21.65■■□□□ 1.06
CLN6-204ENST00000564752 IQCA1Q86XH1 822 aa21.65■■□□□ 1.06
CLN6-204ENST00000564752 PNMA1Q8ND90 353 aa21.65■■□□□ 1.06
CLN6-204ENST00000564752 RGS22Q8NE09 1264 aa21.65■■□□□ 1.06
CLN6-204ENST00000564752 DNERQ8NFT8 737 aa21.65■■□□□ 1.06
CLN6-204ENST00000564752 DNAJB2P25686 324 aa21.64■■□□□ 1.05
CLN6-204ENST00000564752 IMMTQ16891 758 aaKnown RBP21.64■■□□□ 1.05
CLN6-204ENST00000564752 PSRC1Q6PGN9 363 aaPredicted RBP21.64■■□□□ 1.05
CLN6-204ENST00000564752 MAFAQ8NHW3 353 aaPredicted RBP21.64■■□□□ 1.05
CLN6-204ENST00000564752 RUFY2Q8WXA3 655 aa21.64■■□□□ 1.05
CLN6-204ENST00000564752 TRPV6Q9H1D0 765 aa21.64■■□□□ 1.05
CLN6-204ENST00000564752 IL25Q9H293 177 aa21.64■■□□□ 1.05
CLN6-204ENST00000564752 CPVLQ9H3G5 476 aa21.64■■□□□ 1.05
CLN6-204ENST00000564752 HIPK3Q9H422 1215 aa21.64■■□□□ 1.05
CLN6-204ENST00000564752 IL23AQ9NPF7 189 aa21.64■■□□□ 1.05
CLN6-204ENST00000564752 CTNNA3Q9UI47 895 aa21.64■■□□□ 1.05
CLN6-204ENST00000564752 B4GALT4O60513 344 aa21.63■■□□□ 1.05
CLN6-204ENST00000564752 PDE4DQ08499 809 aa21.63■■□□□ 1.05
CLN6-204ENST00000564752 ZSCAN10Q96SZ4 725 aaPredicted RBP21.63■■□□□ 1.05
CLN6-204ENST00000564752 MPHOSPH6Q99547 160 aaKnown RBP21.63■■□□□ 1.05
CLN6-204ENST00000564752 MAF1Q9H063 256 aa21.63■■□□□ 1.05
CLN6-204ENST00000564752 KAT14Q9H8E8 782 aa21.63■■□□□ 1.05
CLN6-204ENST00000564752 POLR3EQ9NVU0 708 aa21.63■■□□□ 1.05
CLN6-204ENST00000564752 ZSWIM5Q9P217 1185 aa21.63■■□□□ 1.05
CLN6-204ENST00000564752 PRUNE2Q8WUY3 3088 aa21.63■■□□□ 1.05
CLN6-204ENST00000564752 LCTP09848 1927 aa21.63■■□□□ 1.05
CLN6-204ENST00000564752 UMODL1Q5DID0 1318 aa21.62■■□□□ 1.05
CLN6-204ENST00000564752 B4E1Z4 1266 aa21.62■■□□□ 1.05
CLN6-204ENST00000564752 CPT1AP50416 773 aa21.62■■□□□ 1.05
CLN6-204ENST00000564752 GRIN2CQ14957 1233 aa21.62■■□□□ 1.05
CLN6-204ENST00000564752 USH1GQ495M9 461 aa21.62■■□□□ 1.05
CLN6-204ENST00000564752 ENAHQ8N8S7 591 aaPredicted RBP21.62■■□□□ 1.05
CLN6-204ENST00000564752 HERVK_113Q902F9 699 aa21.62■■□□□ 1.05
CLN6-204ENST00000564752 TIFAQ96CG3 184 aa21.62■■□□□ 1.05
CLN6-204ENST00000564752 NOC4LQ9BVI4 516 aaKnown RBP21.62■■□□□ 1.05
CLN6-204ENST00000564752 ALDH8A1Q9H2A2 487 aaPredicted RBP21.62■■□□□ 1.05
CLN6-204ENST00000564752 LRRC37A2A6NM11 1700 aa21.62■■□□□ 1.05
CLN6-204ENST00000564752 B4DLN1 442 aa21.61■■□□□ 1.05
CLN6-204ENST00000564752 NKRFO15226 690 aaKnown RBP eCLIP21.61■■□□□ 1.05
CLN6-204ENST00000564752 FOSL2P15408 326 aa21.61■■□□□ 1.05
CLN6-204ENST00000564752 MRPL12P52815 198 aaKnown RBP21.61■■□□□ 1.05
CLN6-204ENST00000564752 PURAQ00577 322 aaKnown RBP21.61■■□□□ 1.05
CLN6-204ENST00000564752 ADGRF4Q8IZF3 695 aa21.61■■□□□ 1.05
CLN6-204ENST00000564752 OR6J1Q8NGC5 347 aa21.61■■□□□ 1.05
CLN6-204ENST00000564752 SCFD2Q8WU76 684 aa21.61■■□□□ 1.05
CLN6-204ENST00000564752 ZNF576Q9H609 170 aa21.61■■□□□ 1.05
CLN6-204ENST00000564752 VCANP13611 3396 aa21.61■■□□□ 1.05
CLN6-204ENST00000564752 GRXCR1A8MXD5 290 aa21.6■■□□□ 1.05
CLN6-204ENST00000564752 FGBP02675 491 aa21.6■■□□□ 1.05
CLN6-204ENST00000564752 CHMLP26374 656 aa21.6■■□□□ 1.05
CLN6-204ENST00000564752 CCL23P55773 120 aa21.6■■□□□ 1.05
CLN6-204ENST00000564752 CDC37Q16543 378 aaPredicted RBP21.6■■□□□ 1.05
CLN6-204ENST00000564752 ASPRV1Q53RT3 343 aa21.6■■□□□ 1.05
CLN6-204ENST00000564752 TBC1D5Q92609 795 aa21.6■■□□□ 1.05
CLN6-204ENST00000564752 PBX4Q9BYU1 374 aa21.6■■□□□ 1.05
CLN6-204ENST00000564752 KRT23Q9C075 422 aa21.6■■□□□ 1.05
CLN6-204ENST00000564752 MYL3P08590 195 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms