RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 TAF6LQ9Y6J9 622 aa22.17■■□□□ 1.14
NME3-207ENST00000564628 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.16■■□□□ 1.14
NME3-207ENST00000564628 TOP1P11387 765 aaKnown RBP22.16■■□□□ 1.14
NME3-207ENST00000564628 PBX2P40425 430 aa22.16■■□□□ 1.14
NME3-207ENST00000564628 BEX3Q00994 111 aa22.16■■□□□ 1.14
NME3-207ENST00000564628 TJAP1Q5JTD0 557 aa22.16■■□□□ 1.14
NME3-207ENST00000564628 NOL8Q76FK4 1167 aaKnown RBP22.16■■□□□ 1.14
NME3-207ENST00000564628 TLK2Q86UE8 772 aa22.16■■□□□ 1.14
NME3-207ENST00000564628 USP38Q8NB14 1042 aa22.16■■□□□ 1.14
NME3-207ENST00000564628 ANKS1AQ92625 1134 aa22.16■■□□□ 1.14
NME3-207ENST00000564628 TRERF1Q96PN7 1200 aa22.16■■□□□ 1.14
NME3-207ENST00000564628 TMEM47Q9BQJ4 181 aa22.16■■□□□ 1.14
NME3-207ENST00000564628 IL23AQ9NPF7 189 aa22.16■■□□□ 1.14
NME3-207ENST00000564628 PRDM6Q9NQX0 595 aa22.16■■□□□ 1.14
NME3-207ENST00000564628 ISY1Q9ULR0 285 aaKnown RBP22.16■■□□□ 1.14
NME3-207ENST00000564628 LRRC37A2A6NM11 1700 aa22.15■■□□□ 1.14
NME3-207ENST00000564628 GRXCR1A8MXD5 290 aa22.15■■□□□ 1.14
NME3-207ENST00000564628 MCCP23508 829 aa22.15■■□□□ 1.14
NME3-207ENST00000564628 IKQ13123 557 aaPredicted RBP22.15■■□□□ 1.14
NME3-207ENST00000564628 FSCN1Q16658 493 aaKnown RBP22.15■■□□□ 1.14
NME3-207ENST00000564628 CASC1Q6TDU7 716 aa22.15■■□□□ 1.14
NME3-207ENST00000564628 CXCL17Q6UXB2 119 aa22.15■■□□□ 1.14
NME3-207ENST00000564628 DGKHQ86XP1 1220 aa22.15■■□□□ 1.14
NME3-207ENST00000564628 HERVK_113Q902F9 699 aa22.15■■□□□ 1.14
NME3-207ENST00000564628 GAS2L1Q99501 681 aaPredicted RBP22.15■■□□□ 1.14
NME3-207ENST00000564628 MTIF3Q9H2K0 278 aaKnown RBP22.15■■□□□ 1.14
NME3-207ENST00000564628 ZSWIM5Q9P217 1185 aa22.15■■□□□ 1.14
NME3-207ENST00000564628 Q9Y3F1 56 aa22.15■■□□□ 1.14
NME3-207ENST00000564628 TTC28Q96AY4 2481 aa22.15■■□□□ 1.14
NME3-207ENST00000564628 ZEB2O60315 1214 aa22.14■■□□□ 1.13
NME3-207ENST00000564628 ACRP10323 421 aa22.14■■□□□ 1.13
NME3-207ENST00000564628 ALAS1P13196 640 aa22.14■■□□□ 1.13
NME3-207ENST00000564628 CYP2C18P33260 490 aa22.14■■□□□ 1.13
NME3-207ENST00000564628 ITGA7Q13683 1181 aa22.14■■□□□ 1.13
NME3-207ENST00000564628 RAB30Q15771 203 aa22.14■■□□□ 1.13
NME3-207ENST00000564628 CCDC178Q5BJE1 867 aa22.14■■□□□ 1.13
NME3-207ENST00000564628 IQSEC1Q6DN90 963 aa22.14■■□□□ 1.13
NME3-207ENST00000564628 STOX1Q6ZVD7 989 aa22.14■■□□□ 1.13
NME3-207ENST00000564628 RASGRP2Q7LDG7 609 aa22.14■■□□□ 1.13
NME3-207ENST00000564628 IQCA1Q86XH1 822 aa22.14■■□□□ 1.13
NME3-207ENST00000564628 AP5M1Q9H0R1 490 aa22.14■■□□□ 1.13
NME3-207ENST00000564628 HIPK3Q9H422 1215 aa22.14■■□□□ 1.13
NME3-207ENST00000564628 ANO2Q9NQ90 1003 aa22.14■■□□□ 1.13
NME3-207ENST00000564628 CYP39A1Q9NYL5 469 aa22.14■■□□□ 1.13
NME3-207ENST00000564628 E7EWF7 191 aa22.13■■□□□ 1.13
NME3-207ENST00000564628 SMPD1P17405 629 aa22.13■■□□□ 1.13
NME3-207ENST00000564628 NECTIN1Q15223 517 aa22.13■■□□□ 1.13
NME3-207ENST00000564628 DCAF4Q8WV16 495 aa22.13■■□□□ 1.13
NME3-207ENST00000564628 ZSCAN10Q96SZ4 725 aaPredicted RBP22.13■■□□□ 1.13
NME3-207ENST00000564628 ZKSCAN3Q9BRR0 538 aa22.13■■□□□ 1.13
NME3-207ENST00000564628 PRR12Q9ULL5 1215 aa22.13■■□□□ 1.13
NME3-207ENST00000564628 TAPT1Q6NXT6 567 aa22.12■■□□□ 1.13
NME3-207ENST00000564628 KCTD1Q719H9 257 aa22.12■■□□□ 1.13
NME3-207ENST00000564628 CYB5R4Q7L1T6 521 aa22.12■■□□□ 1.13
NME3-207ENST00000564628 ENAHQ8N8S7 591 aaPredicted RBP22.12■■□□□ 1.13
NME3-207ENST00000564628 MORC4Q8TE76 937 aa22.12■■□□□ 1.13
NME3-207ENST00000564628 MSRAQ9UJ68 235 aa22.12■■□□□ 1.13
NME3-207ENST00000564628 GRIN2DO15399 1336 aa22.11■■□□□ 1.13
NME3-207ENST00000564628 TNKSO95271 1327 aa22.11■■□□□ 1.13
NME3-207ENST00000564628 DYNC1LI2O43237 492 aaPredicted RBP22.11■■□□□ 1.13
NME3-207ENST00000564628 FGBP02675 491 aa22.11■■□□□ 1.13
NME3-207ENST00000564628 SNHG28P0DPA3 235 aa22.11■■□□□ 1.13
NME3-207ENST00000564628 PRDM12Q9H4Q4 367 aa22.11■■□□□ 1.13
NME3-207ENST00000564628 VTA1Q9NP79 307 aa22.11■■□□□ 1.13
NME3-207ENST00000564628 CXXC1Q9P0U4 656 aaPredicted RBP22.11■■□□□ 1.13
NME3-207ENST00000564628 SLC27A2O14975 620 aa22.1■■□□□ 1.13
NME3-207ENST00000564628 ICAM1P05362 532 aa22.1■■□□□ 1.13
NME3-207ENST00000564628 PDHBP11177 359 aa22.1■■□□□ 1.13
NME3-207ENST00000564628 TRDNQ13061 729 aa22.1■■□□□ 1.13
NME3-207ENST00000564628 SEC23AQ15436 765 aa22.1■■□□□ 1.13
NME3-207ENST00000564628 MUM1L1Q5H9M0 696 aa22.1■■□□□ 1.13
NME3-207ENST00000564628 CREB3L3Q68CJ9 461 aa22.1■■□□□ 1.13
NME3-207ENST00000564628 NCOA7Q8NI08 942 aa22.1■■□□□ 1.13
NME3-207ENST00000564628 ATXN2LQ8WWM7 1075 aaKnown RBP22.1■■□□□ 1.13
NME3-207ENST00000564628 NOC4LQ9BVI4 516 aaKnown RBP22.1■■□□□ 1.13
NME3-207ENST00000564628 PDGFCQ9NRA1 345 aa22.1■■□□□ 1.13
NME3-207ENST00000564628 CCPG1Q9ULG6 757 aa22.1■■□□□ 1.13
NME3-207ENST00000564628 CHD9Q3L8U1 2897 aa22.09■■□□□ 1.13
NME3-207ENST00000564628 UMODL1Q5DID0 1318 aa22.09■■□□□ 1.13
NME3-207ENST00000564628 LOC102724159A0A0B4J2E5 919 aa22.09■■□□□ 1.13
NME3-207ENST00000564628 PWP2Q15269 919 aaKnown RBP22.09■■□□□ 1.13
NME3-207ENST00000564628 FBXO16Q8IX29 292 aaPredicted RBP22.09■■□□□ 1.13
NME3-207ENST00000564628 MB21D2Q8IYB1 491 aaPredicted RBP22.09■■□□□ 1.13
NME3-207ENST00000564628 UBAC1Q9BSL1 405 aa22.09■■□□□ 1.13
NME3-207ENST00000564628 RANBP17Q9H2T7 1088 aaKnown RBP22.09■■□□□ 1.13
NME3-207ENST00000564628 B4GALT4O60513 344 aa22.08■■□□□ 1.13
NME3-207ENST00000564628 SNAP25P60880 206 aa22.08■■□□□ 1.13
NME3-207ENST00000564628 DUSP28Q4G0W2 176 aa22.08■■□□□ 1.13
NME3-207ENST00000564628 BTNL9Q6UXG8 535 aa22.08■■□□□ 1.13
NME3-207ENST00000564628 NSMFQ6X4W1 530 aa22.08■■□□□ 1.13
NME3-207ENST00000564628 EEPD1Q7L9B9 569 aa22.08■■□□□ 1.13
NME3-207ENST00000564628 RALYLQ86SE5 291 aaKnown RBP22.08■■□□□ 1.13
NME3-207ENST00000564628 RPUSD2Q8IZ73 545 aaKnown RBP22.08■■□□□ 1.13
NME3-207ENST00000564628 PNMA1Q8ND90 353 aa22.08■■□□□ 1.13
NME3-207ENST00000564628 CHMP4CQ96CF2 233 aa22.08■■□□□ 1.13
NME3-207ENST00000564628 TRPV6Q9H1D0 765 aa22.08■■□□□ 1.13
NME3-207ENST00000564628 SLC28A3Q9HAS3 691 aa22.08■■□□□ 1.13
NME3-207ENST00000564628 ADD3Q9UEY8 706 aaKnown RBP22.08■■□□□ 1.13
NME3-207ENST00000564628 DDX49Q9Y6V7 483 aaKnown RBP22.08■■□□□ 1.13
NME3-207ENST00000564628 LCTP09848 1927 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms