RNA–Protein interactions for RNA: ENST00000564584.1

CTU2-205, Transcript of cytosolic thiouridylase subunit 2, humanhuman

TSL 3

Gene CTU2, Length 896 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-205ENST00000564584 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.26■□□□□ 0.19
CTU2-205ENST00000564584 SLC12A7Q9Y666 1083 aa16.26■□□□□ 0.19
CTU2-205ENST00000564584 SPTBN5Q9NRC6 3674 aaKnown RBP16.25■□□□□ 0.19
CTU2-205ENST00000564584 SYNRGQ9UMZ2 1314 aa16.25■□□□□ 0.19
CTU2-205ENST00000564584 ST18O60284 1047 aa16.25■□□□□ 0.19
CTU2-205ENST00000564584 RAG1P15918 1043 aa16.25■□□□□ 0.19
CTU2-205ENST00000564584 NEK4P51957 841 aa16.25■□□□□ 0.19
CTU2-205ENST00000564584 PPP2R5BQ15173 497 aa16.25■□□□□ 0.19
CTU2-205ENST00000564584 KCNA10Q16322 511 aa16.25■□□□□ 0.19
CTU2-205ENST00000564584 GPATCH4Q5T3I0 446 aaKnown RBP16.25■□□□□ 0.19
CTU2-205ENST00000564584 CCSAPQ6IQ19 270 aaPredicted RBP16.25■□□□□ 0.19
CTU2-205ENST00000564584 ANKRD33Q7Z3H0 272 aa16.25■□□□□ 0.19
CTU2-205ENST00000564584 CHURC1Q8WUH1 139 aa16.25■□□□□ 0.19
CTU2-205ENST00000564584 AGXT2Q9BYV1 514 aa16.25■□□□□ 0.19
CTU2-205ENST00000564584 ISY1Q9ULR0 285 aaKnown RBP16.25■□□□□ 0.19
CTU2-205ENST00000564584 DCDC2CA8MYV0 355 aa16.24■□□□□ 0.19
CTU2-205ENST00000564584 KIF5BP33176 963 aa16.24■□□□□ 0.19
CTU2-205ENST00000564584 STAT2P52630 851 aa16.24■□□□□ 0.19
CTU2-205ENST00000564584 SMAD3P84022 425 aaKnown RBP16.24■□□□□ 0.19
CTU2-205ENST00000564584 FAAP100Q0VG06 881 aa16.24■□□□□ 0.19
CTU2-205ENST00000564584 ASPRV1Q53RT3 343 aa16.24■□□□□ 0.19
CTU2-205ENST00000564584 FAM160B2Q86V87 743 aa16.24■□□□□ 0.19
CTU2-205ENST00000564584 CHMP4CQ96CF2 233 aa16.24■□□□□ 0.19
CTU2-205ENST00000564584 FGD4Q96M96 766 aa16.24■□□□□ 0.19
CTU2-205ENST00000564584 LRRC2Q9BYS8 371 aa16.24■□□□□ 0.19
CTU2-205ENST00000564584 SPC25Q9HBM1 224 aa16.24■□□□□ 0.19
CTU2-205ENST00000564584 HOMER2Q9NSB8 354 aa16.24■□□□□ 0.19
CTU2-205ENST00000564584 MYADML2A6NDP7 307 aa16.23■□□□□ 0.19
CTU2-205ENST00000564584 PLA2G6O60733 806 aa16.23■□□□□ 0.19
CTU2-205ENST00000564584 SNHG28P0DPA3 235 aa16.23■□□□□ 0.19
CTU2-205ENST00000564584 CPA1P15085 419 aa16.23■□□□□ 0.19
CTU2-205ENST00000564584 GNAQP50148 359 aa16.23■□□□□ 0.19
CTU2-205ENST00000564584 IKQ13123 557 aaPredicted RBP16.23■□□□□ 0.19
CTU2-205ENST00000564584 CCDC96Q2M329 555 aa16.23■□□□□ 0.19
CTU2-205ENST00000564584 CCDC144BQ3MJ40 725 aa16.23■□□□□ 0.19
CTU2-205ENST00000564584 ARMCX2Q7L311 632 aa16.23■□□□□ 0.19
CTU2-205ENST00000564584 ZNF654Q8IZM8 581 aa16.23■□□□□ 0.19
CTU2-205ENST00000564584 PCSK9Q8NBP7 692 aaKnown RBP16.23■□□□□ 0.19
CTU2-205ENST00000564584 BRF1Q92994 677 aa16.23■□□□□ 0.19
CTU2-205ENST00000564584 TCEANC2Q96MN5 208 aa16.23■□□□□ 0.19
CTU2-205ENST00000564584 GLT1D1Q96MS3 346 aa16.23■□□□□ 0.19
CTU2-205ENST00000564584 KIF2CQ99661 725 aa16.23■□□□□ 0.19
CTU2-205ENST00000564584 SEMA6BQ9H3T3 888 aa16.23■□□□□ 0.19
CTU2-205ENST00000564584 ACAD9Q9H845 621 aa16.23■□□□□ 0.19
CTU2-205ENST00000564584 EYSQ5T1H1 3165 aa16.23■□□□□ 0.19
CTU2-205ENST00000564584 ELP1O95163 1332 aa16.22■□□□□ 0.19
CTU2-205ENST00000564584 FRMPD3Q5JV73 1810 aa16.22■□□□□ 0.19
CTU2-205ENST00000564584 CCDC196A0A1B0GTZ2 297 aa16.22■□□□□ 0.19
CTU2-205ENST00000564584 PARP1P09874 1014 aaKnown RBP16.22■□□□□ 0.19
CTU2-205ENST00000564584 C6orf222P0C671 652 aaPredicted RBP16.22■□□□□ 0.19
CTU2-205ENST00000564584 PDHBP11177 359 aa16.22■□□□□ 0.19
CTU2-205ENST00000564584 CST5P28325 142 aaPredicted RBP16.22■□□□□ 0.19
CTU2-205ENST00000564584 MCM2P49736 904 aa16.22■□□□□ 0.19
CTU2-205ENST00000564584 EPHB4P54760 987 aa16.22■□□□□ 0.19
CTU2-205ENST00000564584 EVCP57679 992 aa16.22■□□□□ 0.19
CTU2-205ENST00000564584 GJA9P57773 515 aa16.22■□□□□ 0.19
CTU2-205ENST00000564584 IRX5P78411 483 aaPredicted RBP16.22■□□□□ 0.19
CTU2-205ENST00000564584 CNTN2Q02246 1040 aa16.22■□□□□ 0.19
CTU2-205ENST00000564584 FPGSQ05932 587 aa16.22■□□□□ 0.19
CTU2-205ENST00000564584 TKFCQ3LXA3 575 aa16.22■□□□□ 0.19
CTU2-205ENST00000564584 CCDC144CPQ8IYA2 1237 aa16.22■□□□□ 0.19
CTU2-205ENST00000564584 FAM133AQ8N9E0 248 aa16.22■□□□□ 0.19
CTU2-205ENST00000564584 CTCFLQ8NI51 663 aaPredicted RBP16.22■□□□□ 0.19
CTU2-205ENST00000564584 VTI1AQ96AJ9 217 aa16.22■□□□□ 0.19
CTU2-205ENST00000564584 ZNF274Q96GC6 653 aaPredicted RBP16.22■□□□□ 0.19
CTU2-205ENST00000564584 AGBL1Q96MI9 1066 aa16.22■□□□□ 0.19
CTU2-205ENST00000564584 CDX2Q99626 313 aaPredicted RBP16.22■□□□□ 0.19
CTU2-205ENST00000564584 LZTS2Q9BRK4 669 aa16.22■□□□□ 0.19
CTU2-205ENST00000564584 ZNF536O15090 1300 aa16.21■□□□□ 0.19
CTU2-205ENST00000564584 MYH4Q9Y623 1939 aa16.21■□□□□ 0.19
CTU2-205ENST00000564584 KLF18A0A0U1RQI7 1052 aa16.21■□□□□ 0.19
CTU2-205ENST00000564584 ZBTB43O43298 467 aa16.21■□□□□ 0.19
CTU2-205ENST00000564584 ADCY6O43306 1168 aa16.21■□□□□ 0.19
CTU2-205ENST00000564584 ASGR1P07306 291 aa16.21■□□□□ 0.19
CTU2-205ENST00000564584 ZNF543Q08ER8 600 aa16.21■□□□□ 0.19
CTU2-205ENST00000564584 TROAPQ12815 778 aa16.21■□□□□ 0.19
CTU2-205ENST00000564584 GRM4Q14833 912 aa16.21■□□□□ 0.19
CTU2-205ENST00000564584 GNASQ5JWF2 1037 aa16.21■□□□□ 0.19
CTU2-205ENST00000564584 APOA5Q6Q788 366 aa16.21■□□□□ 0.19
CTU2-205ENST00000564584 KCTD1Q719H9 257 aa16.21■□□□□ 0.19
CTU2-205ENST00000564584 RNPC3Q96LT9 517 aaKnown RBP16.21■□□□□ 0.19
CTU2-205ENST00000564584 TRERF1Q96PN7 1200 aa16.21■□□□□ 0.19
CTU2-205ENST00000564584 KATNBL1Q9H079 304 aa16.21■□□□□ 0.19
CTU2-205ENST00000564584 UPF3AQ9H1J1 476 aaKnown RBP16.21■□□□□ 0.19
CTU2-205ENST00000564584 RNF146Q9NTX7 359 aa16.21■□□□□ 0.19
CTU2-205ENST00000564584 RBM28Q9NW13 759 aaKnown RBP16.21■□□□□ 0.19
CTU2-205ENST00000564584 ASB14A6NK59 587 aa16.2■□□□□ 0.18
CTU2-205ENST00000564584 TIMP1P01033 207 aa16.2■□□□□ 0.18
CTU2-205ENST00000564584 ALAS1P13196 640 aa16.2■□□□□ 0.18
CTU2-205ENST00000564584 CDK7P50613 346 aa16.2■□□□□ 0.18
CTU2-205ENST00000564584 AK2P54819 239 aa16.2■□□□□ 0.18
CTU2-205ENST00000564584 COL9A3Q14050 684 aaPredicted RBP16.2■□□□□ 0.18
CTU2-205ENST00000564584 TOB2Q14106 344 aaPredicted RBP16.2■□□□□ 0.18
CTU2-205ENST00000564584 A1CFQ9NQ94 594 aaKnown RBP16.2■□□□□ 0.18
CTU2-205ENST00000564584 GPHNQ9NQX3 736 aaPredicted RBP16.2■□□□□ 0.18
CTU2-205ENST00000564584 PNMA2Q9UL42 364 aa16.2■□□□□ 0.18
CTU2-205ENST00000564584 NAP1L2Q9ULW6 460 aaPredicted RBP16.2■□□□□ 0.18
CTU2-205ENST00000564584 MTMR7Q9Y216 660 aa16.2■□□□□ 0.18
CTU2-205ENST00000564584 MROH7Q68CQ1 1323 aa16.19■□□□□ 0.18
CTU2-205ENST00000564584 SOWAHBA6NEL2 793 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms