RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 BAATQ14032 418 aaPredicted RBP19.26■□□□□ 0.67
RNF40-206ENST00000564260 MORC4Q8TE76 937 aa19.26■□□□□ 0.67
RNF40-206ENST00000564260 SH2B1Q9NRF2 756 aaPredicted RBP19.26■□□□□ 0.67
RNF40-206ENST00000564260 TPCN1Q9ULQ1 816 aa19.26■□□□□ 0.67
RNF40-206ENST00000564260 LIMCH1Q9UPQ0 1083 aa19.26■□□□□ 0.67
RNF40-206ENST00000564260 PTPDC1A2A3K4 754 aa19.25■□□□□ 0.67
RNF40-206ENST00000564260 PFKFB3Q16875 520 aaPredicted RBP19.25■□□□□ 0.67
RNF40-206ENST00000564260 RAB11FIP4Q86YS3 637 aa19.25■□□□□ 0.67
RNF40-206ENST00000564260 SH3TC2Q8TF17 1288 aa19.25■□□□□ 0.67
RNF40-206ENST00000564260 HMX1Q9NP08 348 aaPredicted RBP19.25■□□□□ 0.67
RNF40-206ENST00000564260 BARHL2Q9NY43 387 aa19.25■□□□□ 0.67
RNF40-206ENST00000564260 DOCK3Q8IZD9 2030 aa19.25■□□□□ 0.67
RNF40-206ENST00000564260 STK36Q9NRP7 1315 aa19.25■□□□□ 0.67
RNF40-206ENST00000564260 GCOM1H8Y6P7 765 aaPredicted RBP19.24■□□□□ 0.67
RNF40-206ENST00000564260 POLR2MP0CAP2 368 aa19.24■□□□□ 0.67
RNF40-206ENST00000564260 SCG2P13521 617 aa19.24■□□□□ 0.67
RNF40-206ENST00000564260 PRKAR2AP13861 404 aaKnown RBP19.24■□□□□ 0.67
RNF40-206ENST00000564260 MCTP2Q6DN12 878 aa19.24■□□□□ 0.67
RNF40-206ENST00000564260 CMTR1Q8N1G2 835 aaKnown RBP19.24■□□□□ 0.67
RNF40-206ENST00000564260 GTF3C6Q969F1 213 aa19.24■□□□□ 0.67
RNF40-206ENST00000564260 IWS1Q96ST2 819 aa19.24■□□□□ 0.67
RNF40-206ENST00000564260 TMEM106CQ9BVX2 250 aa19.24■□□□□ 0.67
RNF40-206ENST00000564260 ABHD16BQ9H3Z7 469 aa19.24■□□□□ 0.67
RNF40-206ENST00000564260 PAK6Q9NQU5 681 aaPredicted RBP19.24■□□□□ 0.67
RNF40-206ENST00000564260 SH3GLB2Q9NR46 395 aa19.24■□□□□ 0.67
RNF40-206ENST00000564260 CNPY2Q9Y2B0 182 aa19.24■□□□□ 0.67
RNF40-206ENST00000564260 V9GY48 417 aaPredicted RBP19.24■□□□□ 0.67
RNF40-206ENST00000564260 ESYT2A0FGR8 921 aa19.23■□□□□ 0.67
RNF40-206ENST00000564260 OPLAHO14841 1288 aa19.23■□□□□ 0.67
RNF40-206ENST00000564260 DEXIO95424 95 aa19.23■□□□□ 0.67
RNF40-206ENST00000564260 CACNB2Q08289 660 aaPredicted RBP19.23■□□□□ 0.67
RNF40-206ENST00000564260 SCRN1Q12765 414 aa19.23■□□□□ 0.67
RNF40-206ENST00000564260 CCL14Q16627 93 aa19.23■□□□□ 0.67
RNF40-206ENST00000564260 CCDC82Q8N4S0 544 aa19.23■□□□□ 0.67
RNF40-206ENST00000564260 NSUN6Q8TEA1 469 aaKnown RBP19.23■□□□□ 0.67
RNF40-206ENST00000564260 CUL5Q93034 780 aa19.23■□□□□ 0.67
RNF40-206ENST00000564260 FLRT1Q9NZU1 646 aa19.23■□□□□ 0.67
RNF40-206ENST00000564260 GJB1P08034 283 aa19.22■□□□□ 0.67
RNF40-206ENST00000564260 CYBAP13498 195 aa19.22■□□□□ 0.67
RNF40-206ENST00000564260 EDNRBP24530 442 aa19.22■□□□□ 0.67
RNF40-206ENST00000564260 ALDH5A1P51649 535 aaPredicted RBP19.22■□□□□ 0.67
RNF40-206ENST00000564260 CCT2P78371 535 aaKnown RBP19.22■□□□□ 0.67
RNF40-206ENST00000564260 SSRP1Q08945 709 aaKnown RBP19.22■□□□□ 0.67
RNF40-206ENST00000564260 SLC30A10Q6XR72 485 aa19.22■□□□□ 0.67
RNF40-206ENST00000564260 HEATR3Q7Z4Q2 680 aa19.22■□□□□ 0.67
RNF40-206ENST00000564260 CCDC148Q8NFR7 591 aa19.22■□□□□ 0.67
RNF40-206ENST00000564260 SYTL5Q8TDW5 730 aaPredicted RBP19.22■□□□□ 0.67
RNF40-206ENST00000564260 FGD4Q96M96 766 aa19.22■□□□□ 0.67
RNF40-206ENST00000564260 SOWAHBA6NEL2 793 aa19.21■□□□□ 0.67
RNF40-206ENST00000564260 CFBP00751 764 aa19.21■□□□□ 0.67
RNF40-206ENST00000564260 CCL5P13501 91 aa19.21■□□□□ 0.67
RNF40-206ENST00000564260 CALML3P27482 149 aa19.21■□□□□ 0.67
RNF40-206ENST00000564260 CNTN2Q02246 1040 aa19.21■□□□□ 0.67
RNF40-206ENST00000564260 ME3Q16798 604 aa19.21■□□□□ 0.67
RNF40-206ENST00000564260 WWC2Q6AWC2 1192 aa19.21■□□□□ 0.67
RNF40-206ENST00000564260 ARMCX2Q7L311 632 aa19.21■□□□□ 0.67
RNF40-206ENST00000564260 WASF1Q92558 559 aa19.21■□□□□ 0.67
RNF40-206ENST00000564260 LLPHQ9BRT6 129 aaKnown RBP19.21■□□□□ 0.67
RNF40-206ENST00000564260 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.21■□□□□ 0.67
RNF40-206ENST00000564260 RNF208Q9H0X6 261 aa19.21■□□□□ 0.67
RNF40-206ENST00000564260 PSTPIP2Q9H939 334 aa19.21■□□□□ 0.67
RNF40-206ENST00000564260 NCOA5Q9HCD5 579 aaKnown RBP19.21■□□□□ 0.67
RNF40-206ENST00000564260 VTA1Q9NP79 307 aa19.21■□□□□ 0.67
RNF40-206ENST00000564260 RBBP6Q7Z6E9 1792 aaKnown RBP19.21■□□□□ 0.67
RNF40-206ENST00000564260 CENPFP49454 3210 aa19.21■□□□□ 0.67
RNF40-206ENST00000564260 STXBP3O00186 592 aa19.2■□□□□ 0.66
RNF40-206ENST00000564260 SEPT4O43236 478 aa19.2■□□□□ 0.66
RNF40-206ENST00000564260 STAM2O75886 525 aa19.2■□□□□ 0.66
RNF40-206ENST00000564260 GNA11P29992 359 aa19.2■□□□□ 0.66
RNF40-206ENST00000564260 CYP2C19P33261 490 aa19.2■□□□□ 0.66
RNF40-206ENST00000564260 NAPAP54920 295 aa19.2■□□□□ 0.66
RNF40-206ENST00000564260 GALNT17Q6IS24 598 aa19.2■□□□□ 0.66
RNF40-206ENST00000564260 XRRA1Q6P2D8 792 aa19.2■□□□□ 0.66
RNF40-206ENST00000564260 BICD2Q8TD16 824 aa19.2■□□□□ 0.66
RNF40-206ENST00000564260 RMDN3Q96TC7 470 aa19.2■□□□□ 0.66
RNF40-206ENST00000564260 SLC26A6Q9BXS9 759 aa19.2■□□□□ 0.66
RNF40-206ENST00000564260 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.2■□□□□ 0.66
RNF40-206ENST00000564260 FRMPD4Q14CM0 1322 aa19.2■□□□□ 0.66
RNF40-206ENST00000564260 FOSP01100 380 aaPredicted RBP19.19■□□□□ 0.66
RNF40-206ENST00000564260 XBP1P17861 261 aa19.19■□□□□ 0.66
RNF40-206ENST00000564260 GJA8P48165 433 aa19.19■□□□□ 0.66
RNF40-206ENST00000564260 STK3Q13188 491 aa19.19■□□□□ 0.66
RNF40-206ENST00000564260 PKN1Q16512 942 aa19.19■□□□□ 0.66
RNF40-206ENST00000564260 PIBF1Q8WXW3 757 aa19.19■□□□□ 0.66
RNF40-206ENST00000564260 PHKBQ93100 1093 aa19.19■□□□□ 0.66
RNF40-206ENST00000564260 ZMYND12Q9H0C1 365 aa19.19■□□□□ 0.66
RNF40-206ENST00000564260 EHMT1Q9H9B1 1298 aa19.19■□□□□ 0.66
RNF40-206ENST00000564260 RIC8AQ9NPQ8 531 aa19.19■□□□□ 0.66
RNF40-206ENST00000564260 MYH6P13533 1939 aa19.19■□□□□ 0.66
RNF40-206ENST00000564260 MEIS2O14770 477 aa19.18■□□□□ 0.66
RNF40-206ENST00000564260 SNAI1O95863 264 aaPredicted RBP19.18■□□□□ 0.66
RNF40-206ENST00000564260 AKR1A1P14550 325 aa19.18■□□□□ 0.66
RNF40-206ENST00000564260 TAL1P17542 331 aaPredicted RBP19.18■□□□□ 0.66
RNF40-206ENST00000564260 AP3B2Q13367 1082 aa19.18■□□□□ 0.66
RNF40-206ENST00000564260 ACVR2BQ13705 512 aa19.18■□□□□ 0.66
RNF40-206ENST00000564260 ANKLE1Q8NAG6 615 aa19.18■□□□□ 0.66
RNF40-206ENST00000564260 SMARCC2Q8TAQ2 1214 aa19.18■□□□□ 0.66
RNF40-206ENST00000564260 UNC93B1Q9H1C4 597 aa19.18■□□□□ 0.66
RNF40-206ENST00000564260 C6orf50Q9HD87 102 aa19.18■□□□□ 0.66
RNF40-206ENST00000564260 PXMP2Q9NR77 195 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms