RNA–Protein interactions for RNA: ENST00000562510.1

SNX29-201, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-201ENST00000562510 CPLX2Q6PUV4 134 aaKnown RBP8.73□□□□□ -1.01
SNX29-201ENST00000562510 RASAL3Q86YV0 1011 aa8.73□□□□□ -1.01
SNX29-201ENST00000562510 CCDC144CPQ8IYA2 1237 aa8.73□□□□□ -1.01
SNX29-201ENST00000562510 NUP133Q8WUM0 1156 aa8.73□□□□□ -1.01
SNX29-201ENST00000562510 TNPO1Q92973 898 aaKnown RBP8.73□□□□□ -1.01
SNX29-201ENST00000562510 ITPKCQ96DU7 683 aa8.73□□□□□ -1.01
SNX29-201ENST00000562510 DDX11Q96FC9 970 aa8.73□□□□□ -1.01
SNX29-201ENST00000562510 CDCA5Q96FF9 252 aa8.73□□□□□ -1.01
SNX29-201ENST00000562510 CEP95Q96GE4 821 aa8.73□□□□□ -1.01
SNX29-201ENST00000562510 MAP3K14Q99558 947 aa8.73□□□□□ -1.01
SNX29-201ENST00000562510 TMEM47Q9BQJ4 181 aa8.73□□□□□ -1.01
SNX29-201ENST00000562510 TMEM39BQ9GZU3 492 aa8.73□□□□□ -1.01
SNX29-201ENST00000562510 KAT14Q9H8E8 782 aa8.73□□□□□ -1.01
SNX29-201ENST00000562510 MTMR4Q9NYA4 1195 aa8.73□□□□□ -1.01
SNX29-201ENST00000562510 GGA3Q9NZ52 723 aa8.73□□□□□ -1.01
SNX29-201ENST00000562510 ASTN2O75129 1339 aaPredicted RBP8.73□□□□□ -1.01
SNX29-201ENST00000562510 TOP1P11387 765 aaKnown RBP8.72□□□□□ -1.01
SNX29-201ENST00000562510 IFNAR1P17181 557 aa8.72□□□□□ -1.01
SNX29-201ENST00000562510 TM4SF4P48230 202 aa8.72□□□□□ -1.01
SNX29-201ENST00000562510 FBXO46Q6PJ61 603 aaPredicted RBP8.72□□□□□ -1.01
SNX29-201ENST00000562510 CLEC17AQ6ZS10 378 aa8.72□□□□□ -1.01
SNX29-201ENST00000562510 FAM184AQ8NB25 1140 aa8.72□□□□□ -1.01
SNX29-201ENST00000562510 ZNF296Q8WUU4 475 aaPredicted RBP8.72□□□□□ -1.01
SNX29-201ENST00000562510 TEPSINQ96N21 525 aa8.72□□□□□ -1.01
SNX29-201ENST00000562510 CFHR5Q9BXR6 569 aa8.72□□□□□ -1.01
SNX29-201ENST00000562510 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.72□□□□□ -1.01
SNX29-201ENST00000562510 RBM28Q9NW13 759 aaKnown RBP8.72□□□□□ -1.01
SNX29-201ENST00000562510 ORC3Q9UBD5 711 aaPredicted RBP8.72□□□□□ -1.01
SNX29-201ENST00000562510 STX8Q9UNK0 236 aa8.72□□□□□ -1.01
SNX29-201ENST00000562510 MTMR6Q9Y217 621 aa8.72□□□□□ -1.01
SNX29-201ENST00000562510 KIF3AQ9Y496 699 aa8.72□□□□□ -1.01
SNX29-201ENST00000562510 PITPNM2Q9BZ72 1349 aa8.72□□□□□ -1.01
SNX29-201ENST00000562510 SIPA1L1O43166 1804 aa8.71□□□□□ -1.01
SNX29-201ENST00000562510 MPHOSPH10O00566 681 aaKnown RBP8.71□□□□□ -1.02
SNX29-201ENST00000562510 TTLL1O95922 423 aa8.71□□□□□ -1.02
SNX29-201ENST00000562510 ZSCAN22P10073 491 aaPredicted RBP8.71□□□□□ -1.02
SNX29-201ENST00000562510 KIF5BP33176 963 aa8.71□□□□□ -1.02
SNX29-201ENST00000562510 GUCY1A2P33402 732 aa8.71□□□□□ -1.02
SNX29-201ENST00000562510 NR1H3Q13133 447 aa8.71□□□□□ -1.02
SNX29-201ENST00000562510 RRP1BQ14684 758 aaKnown RBP8.71□□□□□ -1.02
SNX29-201ENST00000562510 GRM4Q14833 912 aa8.71□□□□□ -1.02
SNX29-201ENST00000562510 ABCB5Q2M3G0 1257 aa8.71□□□□□ -1.02
SNX29-201ENST00000562510 ANGEL2Q5VTE6 544 aaKnown RBP8.71□□□□□ -1.02
SNX29-201ENST00000562510 TMEM179Q6ZVK1 233 aa8.71□□□□□ -1.02
SNX29-201ENST00000562510 NBPF11Q86T75 865 aa8.71□□□□□ -1.02
SNX29-201ENST00000562510 APOBEC3FQ8IUX4 373 aaKnown RBP8.71□□□□□ -1.02
SNX29-201ENST00000562510 RGS22Q8NE09 1264 aa8.71□□□□□ -1.02
SNX29-201ENST00000562510 CTCFLQ8NI51 663 aaPredicted RBP8.71□□□□□ -1.02
SNX29-201ENST00000562510 MKL1Q969V6 931 aa8.71□□□□□ -1.02
SNX29-201ENST00000562510 DEFB129Q9H1M3 183 aa8.71□□□□□ -1.02
SNX29-201ENST00000562510 KANSL2Q9H9L4 492 aa8.71□□□□□ -1.02
SNX29-201ENST00000562510 PGPEP1Q9NXJ5 209 aa8.71□□□□□ -1.02
SNX29-201ENST00000562510 NYAP2Q9P242 653 aa8.71□□□□□ -1.02
SNX29-201ENST00000562510 STK36Q9NRP7 1315 aa8.71□□□□□ -1.02
SNX29-201ENST00000562510 TRPM7Q96QT4 1865 aa8.7□□□□□ -1.02
SNX29-201ENST00000562510 CASP8AP2Q9UKL3 1982 aa8.7□□□□□ -1.02
SNX29-201ENST00000562510 PALM3A6NDB9 673 aaPredicted RBP8.7□□□□□ -1.02
SNX29-201ENST00000562510 GPR25O00155 361 aa8.7□□□□□ -1.02
SNX29-201ENST00000562510 PPFIA3O75145 1194 aa8.7□□□□□ -1.02
SNX29-201ENST00000562510 GDF11O95390 407 aa8.7□□□□□ -1.02
SNX29-201ENST00000562510 ABL2P42684 1182 aa8.7□□□□□ -1.02
SNX29-201ENST00000562510 GNAQP50148 359 aa8.7□□□□□ -1.02
SNX29-201ENST00000562510 JAG1P78504 1218 aa8.7□□□□□ -1.02
SNX29-201ENST00000562510 DHX9Q08211 1270 aaKnown RBP8.7□□□□□ -1.02
SNX29-201ENST00000562510 SSRP1Q08945 709 aaKnown RBP8.7□□□□□ -1.02
SNX29-201ENST00000562510 MCM6Q14566 821 aa8.7□□□□□ -1.02
SNX29-201ENST00000562510 SEPT2Q15019 361 aa8.7□□□□□ -1.02
SNX29-201ENST00000562510 NFKBIBQ15653 356 aa8.7□□□□□ -1.02
SNX29-201ENST00000562510 INTS6LQ5JSJ4 861 aaKnown RBP8.7□□□□□ -1.02
SNX29-201ENST00000562510 HABP4Q5JVS0 413 aaKnown RBP8.7□□□□□ -1.02
SNX29-201ENST00000562510 PPP1R26Q5T8A7 1209 aaPredicted RBP8.7□□□□□ -1.02
SNX29-201ENST00000562510 TMTC3Q6ZXV5 915 aa8.7□□□□□ -1.02
SNX29-201ENST00000562510 MIGA2Q7L4E1 593 aa8.7□□□□□ -1.02
SNX29-201ENST00000562510 TRIM46Q7Z4K8 759 aa8.7□□□□□ -1.02
SNX29-201ENST00000562510 SIAH1Q8IUQ4 282 aa8.7□□□□□ -1.02
SNX29-201ENST00000562510 PHKBQ93100 1093 aa8.7□□□□□ -1.02
SNX29-201ENST00000562510 KLF16Q9BXK1 252 aaPredicted RBP8.7□□□□□ -1.02
SNX29-201ENST00000562510 SLC26A6Q9BXS9 759 aa8.7□□□□□ -1.02
SNX29-201ENST00000562510 GDPD2Q9HCC8 539 aa8.7□□□□□ -1.02
SNX29-201ENST00000562510 CABP5Q9NP86 173 aa8.7□□□□□ -1.02
SNX29-201ENST00000562510 CLIP2Q9UDT6 1046 aa8.7□□□□□ -1.02
SNX29-201ENST00000562510 SCAF8Q9UPN6 1271 aaKnown RBP8.7□□□□□ -1.02
SNX29-201ENST00000562510 VPS37CA5D8V6 355 aaPredicted RBP8.69□□□□□ -1.02
SNX29-201ENST00000562510 PHF20L1A8MW92 1017 aa8.69□□□□□ -1.02
SNX29-201ENST00000562510 H3BQV1 296 aa8.69□□□□□ -1.02
SNX29-201ENST00000562510 PRPF3O43395 683 aaKnown RBP8.69□□□□□ -1.02
SNX29-201ENST00000562510 FKTNO75072 461 aa8.69□□□□□ -1.02
SNX29-201ENST00000562510 PLEKHA8P1O95397 391 aa8.69□□□□□ -1.02
SNX29-201ENST00000562510 BAG4O95429 457 aaKnown RBP8.69□□□□□ -1.02
SNX29-201ENST00000562510 TBC1D8O95759 1140 aa8.69□□□□□ -1.02
SNX29-201ENST00000562510 F13A1P00488 732 aa8.69□□□□□ -1.02
SNX29-201ENST00000562510 GH2P01242 217 aa8.69□□□□□ -1.02
SNX29-201ENST00000562510 SNHG28P0DPA3 235 aa8.69□□□□□ -1.02
SNX29-201ENST00000562510 EEF2P13639 858 aaKnown RBP8.69□□□□□ -1.02
SNX29-201ENST00000562510 SREBF2Q12772 1141 aa8.69□□□□□ -1.02
SNX29-201ENST00000562510 SHROOM1Q2M3G4 852 aaPredicted RBP8.69□□□□□ -1.02
SNX29-201ENST00000562510 NBPF12Q5TAG4 269 aaPredicted RBP8.69□□□□□ -1.02
SNX29-201ENST00000562510 FOXD4L5Q5VV16 416 aaPredicted RBP8.69□□□□□ -1.02
SNX29-201ENST00000562510 MRPL14Q6P1L8 145 aaKnown RBP8.69□□□□□ -1.02
SNX29-201ENST00000562510 CLEC10AQ8IUN9 316 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms