RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 GJA9P57773 515 aa12.94□□□□□ -0.34
LPCAT4-202ENST00000562404 MDM2Q00987 491 aaPredicted RBP12.94□□□□□ -0.34
LPCAT4-202ENST00000562404 BEX3Q00994 111 aa12.94□□□□□ -0.34
LPCAT4-202ENST00000562404 TNFAIP2Q03169 654 aa12.94□□□□□ -0.34
LPCAT4-202ENST00000562404 WTAPQ15007 396 aa12.94□□□□□ -0.34
LPCAT4-202ENST00000562404 TMEM67Q5HYA8 995 aa12.94□□□□□ -0.34
LPCAT4-202ENST00000562404 MYL10Q9BUA6 226 aa12.94□□□□□ -0.34
LPCAT4-202ENST00000562404 SOX1O00570 391 aaPredicted RBP12.93□□□□□ -0.34
LPCAT4-202ENST00000562404 DHX16O60231 1041 aaKnown RBP12.93□□□□□ -0.34
LPCAT4-202ENST00000562404 ASGR1P07306 291 aa12.93□□□□□ -0.34
LPCAT4-202ENST00000562404 EDNRBP24530 442 aa12.93□□□□□ -0.34
LPCAT4-202ENST00000562404 ITGB8P26012 769 aa12.93□□□□□ -0.34
LPCAT4-202ENST00000562404 CST5P28325 142 aaPredicted RBP12.93□□□□□ -0.34
LPCAT4-202ENST00000562404 TLE2Q04725 743 aa12.93□□□□□ -0.34
LPCAT4-202ENST00000562404 C1orf53Q5VUE5 145 aa12.93□□□□□ -0.34
LPCAT4-202ENST00000562404 KIAA1211Q6ZU35 1233 aa12.93□□□□□ -0.34
LPCAT4-202ENST00000562404 RASEFQ8IZ41 740 aa12.93□□□□□ -0.34
LPCAT4-202ENST00000562404 TAAR1Q96RJ0 339 aa12.93□□□□□ -0.34
LPCAT4-202ENST00000562404 TSEN34Q9BSV6 310 aaKnown RBP12.93□□□□□ -0.34
LPCAT4-202ENST00000562404 LRRC2Q9BYS8 371 aa12.93□□□□□ -0.34
LPCAT4-202ENST00000562404 RIOX1Q9H6W3 641 aa12.93□□□□□ -0.34
LPCAT4-202ENST00000562404 PDLIM7Q9NR12 457 aa12.93□□□□□ -0.34
LPCAT4-202ENST00000562404 ABCB11O95342 1321 aa12.92□□□□□ -0.34
LPCAT4-202ENST00000562404 LAMA2P24043 3122 aaKnown RBP12.92□□□□□ -0.34
LPCAT4-202ENST00000562404 TRIM43BA6NCK2 446 aa12.92□□□□□ -0.34
LPCAT4-202ENST00000562404 SH2B2O14492 632 aaPredicted RBP12.92□□□□□ -0.34
LPCAT4-202ENST00000562404 PRC1O43663 620 aa12.92□□□□□ -0.34
LPCAT4-202ENST00000562404 BMP8BP34820 402 aa12.92□□□□□ -0.34
LPCAT4-202ENST00000562404 NKX3-2P78367 333 aa12.92□□□□□ -0.34
LPCAT4-202ENST00000562404 FBXO11Q86XK2 927 aa12.92□□□□□ -0.34
LPCAT4-202ENST00000562404 RGS22Q8NE09 1264 aa12.92□□□□□ -0.34
LPCAT4-202ENST00000562404 SYTL5Q8TDW5 730 aaPredicted RBP12.92□□□□□ -0.34
LPCAT4-202ENST00000562404 TRIM43Q96BQ3 446 aaPredicted RBP12.92□□□□□ -0.34
LPCAT4-202ENST00000562404 PIGSQ96S52 555 aa12.92□□□□□ -0.34
LPCAT4-202ENST00000562404 VTA1Q9NP79 307 aa12.92□□□□□ -0.34
LPCAT4-202ENST00000562404 RBM47A0AV96 593 aaKnown RBP12.91□□□□□ -0.34
LPCAT4-202ENST00000562404 ERICH2A1L162 156 aa12.91□□□□□ -0.34
LPCAT4-202ENST00000562404 MOXD2PA6NHM9 499 aa12.91□□□□□ -0.34
LPCAT4-202ENST00000562404 DYNC1LI2O43237 492 aaPredicted RBP12.91□□□□□ -0.34
LPCAT4-202ENST00000562404 CDC45O75419 566 aa12.91□□□□□ -0.34
LPCAT4-202ENST00000562404 RXRAP19793 462 aa12.91□□□□□ -0.34
LPCAT4-202ENST00000562404 ADCK5Q3MIX3 580 aa12.91□□□□□ -0.34
LPCAT4-202ENST00000562404 GNASQ5JWF2 1037 aa12.91□□□□□ -0.34
LPCAT4-202ENST00000562404 TLK2Q86UE8 772 aa12.91□□□□□ -0.34
LPCAT4-202ENST00000562404 HOMER1Q86YM7 354 aa12.91□□□□□ -0.34
LPCAT4-202ENST00000562404 RAB11FIP4Q86YS3 637 aa12.91□□□□□ -0.34
LPCAT4-202ENST00000562404 ZNF654Q8IZM8 581 aa12.91□□□□□ -0.34
LPCAT4-202ENST00000562404 COPS5Q92905 334 aa12.91□□□□□ -0.34
LPCAT4-202ENST00000562404 PRDM5Q9NQX1 630 aaPredicted RBP12.91□□□□□ -0.34
LPCAT4-202ENST00000562404 STARD7Q9NQZ5 370 aa12.91□□□□□ -0.34
LPCAT4-202ENST00000562404 ADD3Q9UEY8 706 aaKnown RBP12.91□□□□□ -0.34
LPCAT4-202ENST00000562404 PNMA2Q9UL42 364 aa12.91□□□□□ -0.34
LPCAT4-202ENST00000562404 DOCK5Q9H7D0 1870 aa12.91□□□□□ -0.34
LPCAT4-202ENST00000562404 GRIN2DO15399 1336 aa12.9□□□□□ -0.34
LPCAT4-202ENST00000562404 ZBTB5O15062 677 aa12.9□□□□□ -0.34
LPCAT4-202ENST00000562404 PQBP1O60828 265 aaKnown RBP12.9□□□□□ -0.34
LPCAT4-202ENST00000562404 ARIH2O95376 493 aa12.9□□□□□ -0.34
LPCAT4-202ENST00000562404 MCM5P33992 734 aa12.9□□□□□ -0.34
LPCAT4-202ENST00000562404 CDK7P50613 346 aa12.9□□□□□ -0.34
LPCAT4-202ENST00000562404 SART3Q15020 963 aaKnown RBP12.9□□□□□ -0.34
LPCAT4-202ENST00000562404 DUSP28Q4G0W2 176 aa12.9□□□□□ -0.34
LPCAT4-202ENST00000562404 IQSEC1Q6DN90 963 aa12.9□□□□□ -0.34
LPCAT4-202ENST00000562404 CXCL17Q6UXB2 119 aa12.9□□□□□ -0.34
LPCAT4-202ENST00000562404 NOL8Q76FK4 1167 aaKnown RBP12.9□□□□□ -0.34
LPCAT4-202ENST00000562404 CMTR1Q8N1G2 835 aaKnown RBP12.9□□□□□ -0.34
LPCAT4-202ENST00000562404 DNERQ8NFT8 737 aa12.9□□□□□ -0.34
LPCAT4-202ENST00000562404 NUP133Q8WUM0 1156 aa12.9□□□□□ -0.34
LPCAT4-202ENST00000562404 PIBF1Q8WXW3 757 aa12.9□□□□□ -0.34
LPCAT4-202ENST00000562404 LRCH3Q96II8 777 aa12.9□□□□□ -0.34
LPCAT4-202ENST00000562404 TCEANC2Q96MN5 208 aa12.9□□□□□ -0.34
LPCAT4-202ENST00000562404 AMNQ9BXJ7 453 aa12.9□□□□□ -0.34
LPCAT4-202ENST00000562404 WDR11Q9BZH6 1224 aa12.9□□□□□ -0.34
LPCAT4-202ENST00000562404 SCN10AQ9Y5Y9 1956 aa12.9□□□□□ -0.34
LPCAT4-202ENST00000562404 LOC102724159A0A0B4J2E5 919 aa12.89□□□□□ -0.35
LPCAT4-202ENST00000562404 PLEKHA8P1O95397 391 aa12.89□□□□□ -0.35
LPCAT4-202ENST00000562404 CFBP00751 764 aa12.89□□□□□ -0.35
LPCAT4-202ENST00000562404 HSD17B4P51659 736 aa12.89□□□□□ -0.35
LPCAT4-202ENST00000562404 GHRHRQ02643 423 aa12.89□□□□□ -0.35
LPCAT4-202ENST00000562404 PDE4DQ08499 809 aa12.89□□□□□ -0.35
LPCAT4-202ENST00000562404 FAAP100Q0VG06 881 aa12.89□□□□□ -0.35
LPCAT4-202ENST00000562404 PWP2Q15269 919 aaKnown RBP12.89□□□□□ -0.35
LPCAT4-202ENST00000562404 FSCN1Q16658 493 aaKnown RBP12.89□□□□□ -0.35
LPCAT4-202ENST00000562404 CASC1Q6TDU7 716 aa12.89□□□□□ -0.35
LPCAT4-202ENST00000562404 CATIPQ7Z7H3 387 aa12.89□□□□□ -0.35
LPCAT4-202ENST00000562404 PCSK9Q8NBP7 692 aaKnown RBP12.89□□□□□ -0.35
LPCAT4-202ENST00000562404 BADQ92934 168 aa12.89□□□□□ -0.35
LPCAT4-202ENST00000562404 UBE2OQ9C0C9 1292 aaKnown RBP12.89□□□□□ -0.35
LPCAT4-202ENST00000562404 MRPL11Q9Y3B7 192 aaKnown RBP12.89□□□□□ -0.35
LPCAT4-202ENST00000562404 PCDHA1Q9Y5I3 950 aa12.89□□□□□ -0.35
LPCAT4-202ENST00000562404 ELP1O95163 1332 aa12.88□□□□□ -0.35
LPCAT4-202ENST00000562404 A0A1W2PPC1 479 aa12.88□□□□□ -0.35
LPCAT4-202ENST00000562404 CLTBP09497 229 aa12.88□□□□□ -0.35
LPCAT4-202ENST00000562404 CPA1P15085 419 aa12.88□□□□□ -0.35
LPCAT4-202ENST00000562404 EIF2AK2P19525 551 aaKnown RBP12.88□□□□□ -0.35
LPCAT4-202ENST00000562404 HOXA13P31271 388 aaPredicted RBP12.88□□□□□ -0.35
LPCAT4-202ENST00000562404 EXOSC10Q01780 885 aaKnown RBP12.88□□□□□ -0.35
LPCAT4-202ENST00000562404 ANKRD33Q7Z3H0 272 aa12.88□□□□□ -0.35
LPCAT4-202ENST00000562404 TDHQ8IZJ6 230 aa12.88□□□□□ -0.35
LPCAT4-202ENST00000562404 SRBD1Q8N5C6 995 aaKnown RBP12.88□□□□□ -0.35
LPCAT4-202ENST00000562404 IL31RAQ8NI17 732 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms