RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 ATP6V1G3Q96LB4 118 aa20.63■□□□□ 0.89
RAB40C-206ENST00000561781 PPANQ9NQ55 473 aaKnown RBP20.63■□□□□ 0.89
RAB40C-206ENST00000561781 DDX21Q9NR30 783 aaKnown RBP eCLIP20.63■□□□□ 0.89
RAB40C-206ENST00000561781 STK32BQ9NY57 414 aa20.63■□□□□ 0.89
RAB40C-206ENST00000561781 STX17P56962 302 aa20.63■□□□□ 0.89
RAB40C-206ENST00000561781 PPP1R7Q15435 360 aa20.63■□□□□ 0.89
RAB40C-206ENST00000561781 SDCCAG8Q86SQ7 713 aaPredicted RBP20.63■□□□□ 0.89
RAB40C-206ENST00000561781 IQCKQ8N0W5 287 aa20.63■□□□□ 0.89
RAB40C-206ENST00000561781 GALNT15Q8N3T1 639 aa20.63■□□□□ 0.89
RAB40C-206ENST00000561781 AIDAQ96BJ3 306 aa20.63■□□□□ 0.89
RAB40C-206ENST00000561781 L3MBTL3Q96JM7 780 aaPredicted RBP20.63■□□□□ 0.89
RAB40C-206ENST00000561781 ZFATQ9P243 1243 aa20.63■□□□□ 0.89
RAB40C-206ENST00000561781 REXO2Q9Y3B8 237 aaKnown RBP20.63■□□□□ 0.89
RAB40C-206ENST00000561781 UBR3Q6ZT12 1888 aa20.63■□□□□ 0.89
RAB40C-206ENST00000561781 RPS6KA4O75676 772 aa20.62■□□□□ 0.89
RAB40C-206ENST00000561781 GNAT1P11488 350 aa20.62■□□□□ 0.89
RAB40C-206ENST00000561781 CDC25AP30304 524 aa20.62■□□□□ 0.89
RAB40C-206ENST00000561781 SPATA1Q5VX52 437 aa20.62■□□□□ 0.89
RAB40C-206ENST00000561781 KLHL10Q6JEL2 608 aa20.62■□□□□ 0.89
RAB40C-206ENST00000561781 KRI1Q8N9T8 703 aaKnown RBP20.62■□□□□ 0.89
RAB40C-206ENST00000561781 ALG1Q9BT22 464 aa20.62■□□□□ 0.89
RAB40C-206ENST00000561781 TSGA10Q9BZW7 698 aa20.62■□□□□ 0.89
RAB40C-206ENST00000561781 SLC5A4Q9NY91 659 aa20.62■□□□□ 0.89
RAB40C-206ENST00000561781 LEMD3Q9Y2U8 911 aa20.62■□□□□ 0.89
RAB40C-206ENST00000561781 EPN1Q9Y6I3 576 aaPredicted RBP20.62■□□□□ 0.89
RAB40C-206ENST00000561781 C5orf60A6NFR6 353 aa20.62■□□□□ 0.89
RAB40C-206ENST00000561781 FAM163BP0C2L3 166 aa20.62■□□□□ 0.89
RAB40C-206ENST00000561781 ATP4AP20648 1035 aa20.62■□□□□ 0.89
RAB40C-206ENST00000561781 RANBP1P43487 201 aa20.62■□□□□ 0.89
RAB40C-206ENST00000561781 ITGB3BPQ13352 177 aaPredicted RBP20.62■□□□□ 0.89
RAB40C-206ENST00000561781 TRIM14Q14142 442 aa20.62■□□□□ 0.89
RAB40C-206ENST00000561781 KRT40Q6A162 431 aa20.62■□□□□ 0.89
RAB40C-206ENST00000561781 CCT6BQ92526 530 aa20.62■□□□□ 0.89
RAB40C-206ENST00000561781 PDE2AO00408 941 aaPredicted RBP20.61■□□□□ 0.89
RAB40C-206ENST00000561781 PPIP5K2O43314 1243 aa20.61■□□□□ 0.89
RAB40C-206ENST00000561781 NDUFA10O95299 355 aa20.61■□□□□ 0.89
RAB40C-206ENST00000561781 ZNF662Q6ZS27 426 aa20.61■□□□□ 0.89
RAB40C-206ENST00000561781 DMGDHQ9UI17 866 aaKnown RBP20.61■□□□□ 0.89
RAB40C-206ENST00000561781 SYNRGQ9UMZ2 1314 aa20.61■□□□□ 0.89
RAB40C-206ENST00000561781 ZNF233A6NK53 670 aa20.61■□□□□ 0.89
RAB40C-206ENST00000561781 SEMA3EO15041 775 aa20.61■□□□□ 0.89
RAB40C-206ENST00000561781 PRC1O43663 620 aa20.61■□□□□ 0.89
RAB40C-206ENST00000561781 SMIM24O75264 130 aa20.61■□□□□ 0.89
RAB40C-206ENST00000561781 PYGBP11216 843 aa20.61■□□□□ 0.89
RAB40C-206ENST00000561781 GRIN1Q05586 938 aa20.61■□□□□ 0.89
RAB40C-206ENST00000561781 RC3H1Q5TC82 1133 aaKnown RBP20.61■□□□□ 0.89
RAB40C-206ENST00000561781 CDKAL1Q5VV42 579 aa20.61■□□□□ 0.89
RAB40C-206ENST00000561781 TEX9Q8N6V9 391 aa20.61■□□□□ 0.89
RAB40C-206ENST00000561781 NUP88Q99567 741 aaPredicted RBP20.61■□□□□ 0.89
RAB40C-206ENST00000561781 SENP2Q9HC62 589 aa20.61■□□□□ 0.89
RAB40C-206ENST00000561781 ZNF185O15231 689 aa20.6■□□□□ 0.89
RAB40C-206ENST00000561781 TRAPPC3O43617 180 aa20.6■□□□□ 0.89
RAB40C-206ENST00000561781 HLFQ16534 295 aa20.6■□□□□ 0.89
RAB40C-206ENST00000561781 CCDC57Q2TAC2 916 aa20.6■□□□□ 0.89
RAB40C-206ENST00000561781 EPHA10Q5JZY3 1008 aa20.6■□□□□ 0.89
RAB40C-206ENST00000561781 CCDC122Q5T0U0 273 aa20.6■□□□□ 0.89
RAB40C-206ENST00000561781 ZNF572Q7Z3I7 529 aaPredicted RBP20.6■□□□□ 0.89
RAB40C-206ENST00000561781 DZIP3Q86Y13 1208 aaKnown RBP20.6■□□□□ 0.89
RAB40C-206ENST00000561781 CHP1Q99653 195 aa20.6■□□□□ 0.89
RAB40C-206ENST00000561781 LRRC1Q9BTT6 524 aa20.6■□□□□ 0.89
RAB40C-206ENST00000561781 STIM2Q9P246 746 aa20.6■□□□□ 0.89
RAB40C-206ENST00000561781 TFR2Q9UP52 801 aa20.6■□□□□ 0.89
RAB40C-206ENST00000561781 MAP3K15Q6ZN16 1313 aa20.6■□□□□ 0.89
RAB40C-206ENST00000561781 GSTA1P08263 222 aa20.59■□□□□ 0.89
RAB40C-206ENST00000561781 IL6STP40189 918 aaPredicted RBP20.59■□□□□ 0.89
RAB40C-206ENST00000561781 CCT6AP40227 531 aaKnown RBP20.59■□□□□ 0.89
RAB40C-206ENST00000561781 VAV2P52735 878 aa20.59■□□□□ 0.89
RAB40C-206ENST00000561781 HAND2P61296 217 aa20.59■□□□□ 0.89
RAB40C-206ENST00000561781 GKAP1Q5VSY0 366 aaPredicted RBP20.59■□□□□ 0.89
RAB40C-206ENST00000561781 MMTAG2Q9BU76 263 aaKnown RBP20.59■□□□□ 0.89
RAB40C-206ENST00000561781 MOV10L1Q9BXT6 1211 aaKnown RBP20.59■□□□□ 0.89
RAB40C-206ENST00000561781 POLD4Q9HCU8 107 aa20.59■□□□□ 0.89
RAB40C-206ENST00000561781 PCDHGA4Q9Y5G9 962 aa20.59■□□□□ 0.89
RAB40C-206ENST00000561781 CFAP73A6NFT4 308 aa20.59■□□□□ 0.89
RAB40C-206ENST00000561781 STXBP3O00186 592 aa20.59■□□□□ 0.89
RAB40C-206ENST00000561781 RNF8O76064 485 aa20.59■□□□□ 0.89
RAB40C-206ENST00000561781 CD44P16070 742 aaKnown RBP20.59■□□□□ 0.89
RAB40C-206ENST00000561781 GNPTABQ3T906 1256 aa20.59■□□□□ 0.89
RAB40C-206ENST00000561781 ZMYM1Q5SVZ6 1142 aa20.59■□□□□ 0.89
RAB40C-206ENST00000561781 TRAPPC3LQ5T215 181 aa20.59■□□□□ 0.89
RAB40C-206ENST00000561781 STK11IPQ8N1F8 1099 aa20.59■□□□□ 0.89
RAB40C-206ENST00000561781 CCDC63Q8NA47 563 aa20.59■□□□□ 0.89
RAB40C-206ENST00000561781 ANKRD27Q96NW4 1050 aa20.59■□□□□ 0.89
RAB40C-206ENST00000561781 MAST3O60307 1309 aa20.59■□□□□ 0.89
RAB40C-206ENST00000561781 KRT86O43790 486 aa20.58■□□□□ 0.89
RAB40C-206ENST00000561781 KIF4AO95239 1232 aa20.58■□□□□ 0.89
RAB40C-206ENST00000561781 ABCD1P33897 745 aa20.58■□□□□ 0.89
RAB40C-206ENST00000561781 CTCFP49711 727 aaPredicted RBP20.58■□□□□ 0.89
RAB40C-206ENST00000561781 LRRC23Q53EV4 343 aaPredicted RBP20.58■□□□□ 0.89
RAB40C-206ENST00000561781 HDAC7Q8WUI4 952 aa20.58■□□□□ 0.89
RAB40C-206ENST00000561781 CCDC43Q96MW1 224 aaKnown RBP20.58■□□□□ 0.89
RAB40C-206ENST00000561781 PLEKHG4BQ96PX9 1271 aa20.58■□□□□ 0.89
RAB40C-206ENST00000561781 GORASP1Q9BQQ3 440 aa20.58■□□□□ 0.89
RAB40C-206ENST00000561781 L3MBTL1Q9Y468 752 aa20.58■□□□□ 0.89
RAB40C-206ENST00000561781 DIAPH2O60879 1101 aa20.58■□□□□ 0.88
RAB40C-206ENST00000561781 SPATA20Q8TB22 786 aa20.58■□□□□ 0.88
RAB40C-206ENST00000561781 C4AP0C0L4 1744 aa20.58■□□□□ 0.88
RAB40C-206ENST00000561781 ATP2C2O75185 946 aa20.57■□□□□ 0.88
RAB40C-206ENST00000561781 ZBTB7AO95365 584 aa20.57■□□□□ 0.88
RAB40C-206ENST00000561781 RFC4P35249 363 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms