RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 GOLGA8HP0CJ92 632 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 MAGOHBQ96A72 148 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 EIF4E1BA6NMX2 242 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 M0QZ92 97 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 KRT19P08727 400 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 MESDQ14696 234 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 DBN1Q16643 649 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 CXorf38Q8TB03 319 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 TGFBRAP1Q8WUH2 860 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 PAGR1Q9BTK6 254 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 NACA2Q9H009 215 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 BCAP29Q9UHQ4 241 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 RCOR1Q9UKL0 485 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 NFU1Q9UMS0 254 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 PTPRTO14522 1441 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 OR52Z1P0C646 297 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 ACTN3Q08043 901 aaPredicted RBP11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 RESTQ13127 1097 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 TMED2Q15363 201 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 OTUD6AQ7L8S5 288 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 ATP10BO94823 1461 aa11.15□□□□□ -0.63
GTF3C1-202ENST00000561623 GADL1Q6ZQY3 521 aa11.15□□□□□ -0.63
GTF3C1-202ENST00000561623 NT5C3AQ9H0P0 336 aa11.15□□□□□ -0.63
GTF3C1-202ENST00000561623 TYW1Q9NV66 732 aaKnown RBP11.15□□□□□ -0.63
GTF3C1-202ENST00000561623 SLC5A4Q9NY91 659 aa11.15□□□□□ -0.63
GTF3C1-202ENST00000561623 FRMPD2Q68DX3 1309 aaPredicted RBP11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 TNNI1P19237 187 aa11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 GGCXP38435 758 aa11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 TMED1Q13445 227 aa11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 AP1M1Q9BXS5 423 aa11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 VCX3AQ9NNX9 186 aa11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 PDE6BP35913 854 aa11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 SATB1Q01826 763 aa11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 GSDMAQ96QA5 445 aa11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 SCOCQ9UIL1 159 aa11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 NOC2LQ9Y3T9 749 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 DAAM1Q9Y4D1 1078 aa11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 NDUFA10O95299 355 aa11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 SH3BGRP55822 239 aaPredicted RBP11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 ZNF449Q6P9G9 518 aa11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 PDCD7Q8N8D1 485 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 TMEM232C9JQI7 657 aa11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 KIF23Q02241 960 aaPredicted RBP11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 LRRC41Q15345 812 aa11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 LRRC24Q50LG9 513 aa11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 LBHD1Q9BQE6 289 aaPredicted RBP11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 XAB2Q9HCS7 855 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 EDC4Q6P2E9 1401 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 USP17L12C9JPN9 530 aa11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 USP17L21D6R901 530 aa11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 SCG2P13521 617 aa11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 SLC1A4P43007 532 aa11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 SIRT2Q8IXJ6 389 aa11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 OSBPL3Q9H4L5 887 aa11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 ZNF148Q9UQR1 794 aa11.14□□□□□ -0.63
GTF3C1-202ENST00000561623 M0R2C6 588 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 CFBP00751 764 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 TCP11X2Q5H9J9 407 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 ALS2CLQ60I27 953 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 THOC1Q96FV9 657 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 GIPC1O14908 333 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 EIF4A3P38919 411 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 RNF169Q8NCN4 708 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 LZTS2Q9BRK4 669 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 SUDS3Q9H7L9 328 aaPredicted RBP11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 SLC52A2Q9HAB3 445 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 ZBTB7AO95365 584 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 CYP4F22Q6NT55 531 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 PLEKHF1Q96S99 279 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 MORC2Q9Y6X9 1032 aaPredicted RBP11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 KDRP35968 1356 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 KDM3AQ9Y4C1 1321 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 MED23Q9ULK4 1368 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 TRPA1O75762 1119 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 UFL1O94874 794 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 EEF1GP26641 437 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 YIPF3Q9GZM5 350 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 SH3TC1Q8TE82 1336 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 PGRMC1O00264 195 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 EXOC3L4Q17RC7 722 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 LRRC23Q53EV4 343 aaPredicted RBP11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 CCDC93Q567U6 631 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 FAM133AQ8N9E0 248 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 RASGRP4Q8TDF6 673 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 WHAMMQ8TF30 809 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 FBXO41Q8TF61 875 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 SPDL1Q96EA4 605 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 PLAAQ9Y263 795 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 AFG3L2Q9Y4W6 797 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 PCDHA13Q9Y5I0 950 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 UHRF1BP1LA0JNW5 1464 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 ABCC2Q92887 1545 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 SART1O43290 800 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 SAT1P21673 171 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 LONP1P36776 959 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 PRR16Q569H4 304 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 PANX2Q96RD6 677 aa11.13□□□□□ -0.63
GTF3C1-202ENST00000561623 MAGI2Q86UL8 1455 aa11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 PDE6AP16499 860 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms