RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 SCN5AQ14524 2016 aa20.09■□□□□ 0.81
CDC42BPB-208ENST00000561271 TRIM43BA6NCK2 446 aa20.08■□□□□ 0.81
CDC42BPB-208ENST00000561271 CLTBP09497 229 aa20.08■□□□□ 0.81
CDC42BPB-208ENST00000561271 QRICH1Q2TAL8 776 aa20.08■□□□□ 0.81
CDC42BPB-208ENST00000561271 GNASQ5JWF2 1037 aa20.08■□□□□ 0.81
CDC42BPB-208ENST00000561271 TAPT1Q6NXT6 567 aa20.08■□□□□ 0.81
CDC42BPB-208ENST00000561271 CENPQQ7L2Z9 268 aaPredicted RBP20.08■□□□□ 0.81
CDC42BPB-208ENST00000561271 CHST3Q7LGC8 479 aa20.08■□□□□ 0.81
CDC42BPB-208ENST00000561271 TRIM43Q96BQ3 446 aaPredicted RBP20.08■□□□□ 0.81
CDC42BPB-208ENST00000561271 GLT1D1Q96MS3 346 aa20.08■□□□□ 0.81
CDC42BPB-208ENST00000561271 SENP2Q9HC62 589 aa20.08■□□□□ 0.81
CDC42BPB-208ENST00000561271 VAT1LQ9HCJ6 419 aa20.08■□□□□ 0.81
CDC42BPB-208ENST00000561271 GNEQ9Y223 722 aaKnown RBP20.08■□□□□ 0.81
CDC42BPB-208ENST00000561271 ABCB11O95342 1321 aa20.07■□□□□ 0.8
CDC42BPB-208ENST00000561271 NCOA7Q8NI08 942 aa20.07■□□□□ 0.8
CDC42BPB-208ENST00000561271 MAP4K1Q92918 833 aa20.07■□□□□ 0.8
CDC42BPB-208ENST00000561271 BADQ92934 168 aa20.07■□□□□ 0.8
CDC42BPB-208ENST00000561271 JMJD4Q9H9V9 463 aa20.07■□□□□ 0.8
CDC42BPB-208ENST00000561271 IFIT3O14879 490 aaKnown RBP20.06■□□□□ 0.8
CDC42BPB-208ENST00000561271 KIAA1211Q6ZU35 1233 aa20.06■□□□□ 0.8
CDC42BPB-208ENST00000561271 ELP1O95163 1332 aa20.05■□□□□ 0.8
CDC42BPB-208ENST00000561271 LOC102724159A0A0B4J2E5 919 aa20.05■□□□□ 0.8
CDC42BPB-208ENST00000561271 ITGB8P26012 769 aa20.05■□□□□ 0.8
CDC42BPB-208ENST00000561271 ANTXR2P58335 489 aa20.05■□□□□ 0.8
CDC42BPB-208ENST00000561271 NKX3-2P78367 333 aa20.05■□□□□ 0.8
CDC42BPB-208ENST00000561271 PDE4DQ08499 809 aa20.05■□□□□ 0.8
CDC42BPB-208ENST00000561271 PWP2Q15269 919 aaKnown RBP20.05■□□□□ 0.8
CDC42BPB-208ENST00000561271 FSCN1Q16658 493 aaKnown RBP20.05■□□□□ 0.8
CDC42BPB-208ENST00000561271 LRIT3Q3SXY7 679 aa20.05■□□□□ 0.8
CDC42BPB-208ENST00000561271 MB21D2Q8IYB1 491 aaPredicted RBP20.05■□□□□ 0.8
CDC42BPB-208ENST00000561271 TBC1D5Q92609 795 aa20.05■□□□□ 0.8
CDC42BPB-208ENST00000561271 VTI1AQ96AJ9 217 aa20.05■□□□□ 0.8
CDC42BPB-208ENST00000561271 ESYT1Q9BSJ8 1104 aa20.05■□□□□ 0.8
CDC42BPB-208ENST00000561271 LSG1Q9H089 658 aaKnown RBP20.05■□□□□ 0.8
CDC42BPB-208ENST00000561271 AP5M1Q9H0R1 490 aa20.05■□□□□ 0.8
CDC42BPB-208ENST00000561271 MAD2L2Q9UI95 211 aa20.05■□□□□ 0.8
CDC42BPB-208ENST00000561271 A0A0U1RQG5 324 aaPredicted RBP20.04■□□□□ 0.8
CDC42BPB-208ENST00000561271 ERICH2A1L162 156 aa20.04■□□□□ 0.8
CDC42BPB-208ENST00000561271 KLRF2D3W0D1 207 aa20.04■□□□□ 0.8
CDC42BPB-208ENST00000561271 DYNC1LI2O43237 492 aaPredicted RBP20.04■□□□□ 0.8
CDC42BPB-208ENST00000561271 GRM4Q14833 912 aa20.04■□□□□ 0.8
CDC42BPB-208ENST00000561271 WTAPQ15007 396 aa20.04■□□□□ 0.8
CDC42BPB-208ENST00000561271 IQSEC1Q6DN90 963 aa20.04■□□□□ 0.8
CDC42BPB-208ENST00000561271 CXCL17Q6UXB2 119 aa20.04■□□□□ 0.8
CDC42BPB-208ENST00000561271 ANKRD33Q7Z3H0 272 aa20.04■□□□□ 0.8
CDC42BPB-208ENST00000561271 FBXO11Q86XK2 927 aa20.04■□□□□ 0.8
CDC42BPB-208ENST00000561271 COL20A1Q9P218 1284 aa20.04■□□□□ 0.8
CDC42BPB-208ENST00000561271 MYO9BQ13459 2157 aa20.04■□□□□ 0.8
CDC42BPB-208ENST00000561271 PALM3A6NDB9 673 aaPredicted RBP20.03■□□□□ 0.8
CDC42BPB-208ENST00000561271 DCDC2CA8MYV0 355 aa20.03■□□□□ 0.8
CDC42BPB-208ENST00000561271 KIAA0355O15063 1070 aa20.03■□□□□ 0.8
CDC42BPB-208ENST00000561271 EDNRBP24530 442 aa20.03■□□□□ 0.8
CDC42BPB-208ENST00000561271 FAAP100Q0VG06 881 aa20.03■□□□□ 0.8
CDC42BPB-208ENST00000561271 SART3Q15020 963 aaKnown RBP20.03■□□□□ 0.8
CDC42BPB-208ENST00000561271 SLC35G1Q2M3R5 365 aa20.03■□□□□ 0.8
CDC42BPB-208ENST00000561271 DUSP28Q4G0W2 176 aa20.03■□□□□ 0.8
CDC42BPB-208ENST00000561271 BMP2KLQ5H9B9 411 aa20.03■□□□□ 0.8
CDC42BPB-208ENST00000561271 TMEM67Q5HYA8 995 aa20.03■□□□□ 0.8
CDC42BPB-208ENST00000561271 DNERQ8NFT8 737 aa20.03■□□□□ 0.8
CDC42BPB-208ENST00000561271 MPHOSPH6Q99547 160 aaKnown RBP20.03■□□□□ 0.8
CDC42BPB-208ENST00000561271 WDR11Q9BZH6 1224 aa20.03■□□□□ 0.8
CDC42BPB-208ENST00000561271 TMEM39AQ9NV64 488 aa20.03■□□□□ 0.8
CDC42BPB-208ENST00000561271 MROH7Q68CQ1 1323 aa20.02■□□□□ 0.8
CDC42BPB-208ENST00000561271 PPP1R11O60927 126 aaPredicted RBP20.02■□□□□ 0.8
CDC42BPB-208ENST00000561271 RAG1P15918 1043 aa20.02■□□□□ 0.8
CDC42BPB-208ENST00000561271 HOMER1Q86YM7 354 aa20.02■□□□□ 0.8
CDC42BPB-208ENST00000561271 RGS22Q8NE09 1264 aa20.02■□□□□ 0.8
CDC42BPB-208ENST00000561271 SYTL5Q8TDW5 730 aaPredicted RBP20.02■□□□□ 0.8
CDC42BPB-208ENST00000561271 TOX2Q96NM4 488 aa20.02■□□□□ 0.8
CDC42BPB-208ENST00000561271 ANO2Q9NQ90 1003 aa20.02■□□□□ 0.8
CDC42BPB-208ENST00000561271 RBM47A0AV96 593 aaKnown RBP20.01■□□□□ 0.79
CDC42BPB-208ENST00000561271 ARVCFO00192 962 aa20.01■□□□□ 0.79
CDC42BPB-208ENST00000561271 CDK7P50613 346 aa20.01■□□□□ 0.79
CDC42BPB-208ENST00000561271 COL9A3Q14050 684 aaPredicted RBP20.01■□□□□ 0.79
CDC42BPB-208ENST00000561271 PPP2R5BQ15173 497 aa20.01■□□□□ 0.79
CDC42BPB-208ENST00000561271 C9orf50Q5SZB4 431 aa20.01■□□□□ 0.79
CDC42BPB-208ENST00000561271 MTMR8Q96EF0 704 aa20.01■□□□□ 0.79
CDC42BPB-208ENST00000561271 AMNQ9BXJ7 453 aa20.01■□□□□ 0.79
CDC42BPB-208ENST00000561271 GPHNQ9NQX3 736 aaPredicted RBP20.01■□□□□ 0.79
CDC42BPB-208ENST00000561271 TBX21Q9UL17 535 aa20.01■□□□□ 0.79
CDC42BPB-208ENST00000561271 MRPL11Q9Y3B7 192 aaKnown RBP20.01■□□□□ 0.79
CDC42BPB-208ENST00000561271 Q9Y3F1 56 aa20.01■□□□□ 0.79
CDC42BPB-208ENST00000561271 KAT6AQ92794 2004 aa20■□□□□ 0.79
CDC42BPB-208ENST00000561271 OPLAHO14841 1288 aa20■□□□□ 0.79
CDC42BPB-208ENST00000561271 SLC27A2O14975 620 aa20■□□□□ 0.79
CDC42BPB-208ENST00000561271 ZBTB5O15062 677 aa20■□□□□ 0.79
CDC42BPB-208ENST00000561271 TROAPQ12815 778 aa20■□□□□ 0.79
CDC42BPB-208ENST00000561271 SHHQ15465 462 aa20■□□□□ 0.79
CDC42BPB-208ENST00000561271 MCF2L2Q86YR7 1114 aa20■□□□□ 0.79
CDC42BPB-208ENST00000561271 FAM126BQ8IXS8 530 aa20■□□□□ 0.79
CDC42BPB-208ENST00000561271 OR6J1Q8NGC5 347 aa20■□□□□ 0.79
CDC42BPB-208ENST00000561271 TAAR1Q96RJ0 339 aa20■□□□□ 0.79
CDC42BPB-208ENST00000561271 MYL10Q9BUA6 226 aa20■□□□□ 0.79
CDC42BPB-208ENST00000561271 LY9Q9HBG7 655 aa20■□□□□ 0.79
CDC42BPB-208ENST00000561271 ZEB2O60315 1214 aa19.99■□□□□ 0.79
CDC42BPB-208ENST00000561271 CFBP00751 764 aa19.99■□□□□ 0.79
CDC42BPB-208ENST00000561271 PSMC6P62333 389 aa19.99■□□□□ 0.79
CDC42BPB-208ENST00000561271 CREB3L3Q68CJ9 461 aa19.99■□□□□ 0.79
CDC42BPB-208ENST00000561271 Q7L0L9 218 aa19.99■□□□□ 0.79
CDC42BPB-208ENST00000561271 CATIPQ7Z7H3 387 aa19.99■□□□□ 0.79
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