RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 IQSEC1Q6DN90 963 aa31.76■■■□□ 2.67
SNRPA1-215ENST00000561187 RNF207Q6ZRF8 634 aa31.76■■■□□ 2.67
SNRPA1-215ENST00000561187 TICAM2Q86XR7 235 aa31.76■■■□□ 2.67
SNRPA1-215ENST00000561187 UBA5Q9GZZ9 404 aa31.76■■■□□ 2.67
SNRPA1-215ENST00000561187 UMODL1Q5DID0 1318 aa31.75■■■□□ 2.67
SNRPA1-215ENST00000561187 PCP11498 1178 aaKnown RBP31.75■■■□□ 2.67
SNRPA1-215ENST00000561187 OSBPL3Q9H4L5 887 aa31.75■■■□□ 2.67
SNRPA1-215ENST00000561187 GRIN2DO15399 1336 aa31.75■■■□□ 2.67
SNRPA1-215ENST00000561187 PRUNE2Q8WUY3 3088 aa31.74■■■□□ 2.67
SNRPA1-215ENST00000561187 B4E1Z4 1266 aa31.74■■■□□ 2.67
SNRPA1-215ENST00000561187 ZEB2O60315 1214 aa31.74■■■□□ 2.67
SNRPA1-215ENST00000561187 SNHG28P0DPA3 235 aa31.74■■■□□ 2.67
SNRPA1-215ENST00000561187 C16orf59Q7L2K0 433 aa31.74■■■□□ 2.67
SNRPA1-215ENST00000561187 MORC4Q8TE76 937 aa31.74■■■□□ 2.67
SNRPA1-215ENST00000561187 TTC14Q96N46 770 aa31.74■■■□□ 2.67
SNRPA1-215ENST00000561187 CD4P01730 458 aa31.73■■■□□ 2.67
SNRPA1-215ENST00000561187 DNAJB2P25686 324 aa31.73■■■□□ 2.67
SNRPA1-215ENST00000561187 RPS6P62753 249 aaKnown RBP31.73■■■□□ 2.67
SNRPA1-215ENST00000561187 PHF6Q8IWS0 365 aaKnown RBP eCLIP31.73■■■□□ 2.67
SNRPA1-215ENST00000561187 TMEM199Q8N511 208 aa31.73■■■□□ 2.67
SNRPA1-215ENST00000561187 MAFAQ8NHW3 353 aaPredicted RBP31.73■■■□□ 2.67
SNRPA1-215ENST00000561187 WDR11Q9BZH6 1224 aa31.73■■■□□ 2.67
SNRPA1-215ENST00000561187 TRPV6Q9H1D0 765 aa31.73■■■□□ 2.67
SNRPA1-215ENST00000561187 GRXCR1A8MXD5 290 aa31.72■■■□□ 2.67
SNRPA1-215ENST00000561187 CABYRO75952 493 aa31.72■■■□□ 2.67
SNRPA1-215ENST00000561187 TMEM240Q5SV17 173 aa31.72■■■□□ 2.67
SNRPA1-215ENST00000561187 PNMA1Q8ND90 353 aa31.72■■■□□ 2.67
SNRPA1-215ENST00000561187 PPP1R13LQ8WUF5 828 aa31.72■■■□□ 2.67
SNRPA1-215ENST00000561187 HIPK3Q9H422 1215 aa31.72■■■□□ 2.67
SNRPA1-215ENST00000561187 B4GALT4O60513 344 aa31.71■■■□□ 2.67
SNRPA1-215ENST00000561187 FOSL2P15408 326 aa31.71■■■□□ 2.67
SNRPA1-215ENST00000561187 PDE4DQ08499 809 aa31.71■■■□□ 2.67
SNRPA1-215ENST00000561187 DUSP28Q4G0W2 176 aa31.71■■■□□ 2.67
SNRPA1-215ENST00000561187 ZNF365Q70YC5 407 aa31.71■■■□□ 2.67
SNRPA1-215ENST00000561187 KAT14Q9H8E8 782 aa31.71■■■□□ 2.67
SNRPA1-215ENST00000561187 WDR19Q8NEZ3 1342 aa31.71■■■□□ 2.67
SNRPA1-215ENST00000561187 HSFX4A0A1B0GTS1 333 aaPredicted RBP31.7■■■□□ 2.67
SNRPA1-215ENST00000561187 HSFX3A0A1B0GWH4 333 aaPredicted RBP31.7■■■□□ 2.67
SNRPA1-215ENST00000561187 MYL3P08590 195 aa31.7■■■□□ 2.67
SNRPA1-215ENST00000561187 CCL23P55773 120 aa31.7■■■□□ 2.67
SNRPA1-215ENST00000561187 IQCA1Q86XH1 822 aa31.7■■■□□ 2.67
SNRPA1-215ENST00000561187 SLC43A3Q8NBI5 491 aa31.7■■■□□ 2.67
SNRPA1-215ENST00000561187 OR6J1Q8NGC5 347 aa31.7■■■□□ 2.67
SNRPA1-215ENST00000561187 IL25Q9H293 177 aa31.7■■■□□ 2.67
SNRPA1-215ENST00000561187 CDC37Q16543 378 aaPredicted RBP31.69■■■□□ 2.66
SNRPA1-215ENST00000561187 GPATCH4Q5T3I0 446 aaKnown RBP31.69■■■□□ 2.66
SNRPA1-215ENST00000561187 COPS5Q92905 334 aa31.69■■■□□ 2.66
SNRPA1-215ENST00000561187 DHX16O60231 1041 aaKnown RBP31.68■■■□□ 2.66
SNRPA1-215ENST00000561187 PBX2P40425 430 aa31.68■■■□□ 2.66
SNRPA1-215ENST00000561187 DGKHQ86XP1 1220 aa31.68■■■□□ 2.66
SNRPA1-215ENST00000561187 ZSCAN10Q96SZ4 725 aaPredicted RBP31.68■■■□□ 2.66
SNRPA1-215ENST00000561187 Q9Y3F1 56 aa31.68■■■□□ 2.66
SNRPA1-215ENST00000561187 HIP1O00291 1037 aa31.67■■■□□ 2.66
SNRPA1-215ENST00000561187 GRIN2CQ14957 1233 aa31.67■■■□□ 2.66
SNRPA1-215ENST00000561187 PPP2R5BQ15173 497 aa31.67■■■□□ 2.66
SNRPA1-215ENST00000561187 IMMTQ16891 758 aaKnown RBP31.67■■■□□ 2.66
SNRPA1-215ENST00000561187 PSRC1Q6PGN9 363 aaPredicted RBP31.67■■■□□ 2.66
SNRPA1-215ENST00000561187 ENAHQ8N8S7 591 aaPredicted RBP31.67■■■□□ 2.66
SNRPA1-215ENST00000561187 TIFAQ96CG3 184 aa31.67■■■□□ 2.66
SNRPA1-215ENST00000561187 TNKSO95271 1327 aa31.67■■■□□ 2.66
SNRPA1-215ENST00000561187 VCANP13611 3396 aa31.67■■■□□ 2.66
SNRPA1-215ENST00000561187 DSCC1Q9BVC3 393 aa31.66■■■□□ 2.66
SNRPA1-215ENST00000561187 IL23AQ9NPF7 189 aa31.66■■■□□ 2.66
SNRPA1-215ENST00000561187 TRMT13Q9NUP7 481 aaKnown RBP31.66■■■□□ 2.66
SNRPA1-215ENST00000561187 ADGRF4Q8IZF3 695 aa31.65■■■□□ 2.66
SNRPA1-215ENST00000561187 TBC1D5Q92609 795 aa31.65■■■□□ 2.66
SNRPA1-215ENST00000561187 NOC4LQ9BVI4 516 aaKnown RBP31.65■■■□□ 2.66
SNRPA1-215ENST00000561187 PBX4Q9BYU1 374 aa31.65■■■□□ 2.66
SNRPA1-215ENST00000561187 WNT8AQ9H1J5 351 aa31.65■■■□□ 2.66
SNRPA1-215ENST00000561187 VAT1LQ9HCJ6 419 aa31.65■■■□□ 2.66
SNRPA1-215ENST00000561187 CXXC1Q9P0U4 656 aaPredicted RBP31.65■■■□□ 2.66
SNRPA1-215ENST00000561187 ZSWIM5Q9P217 1185 aa31.65■■■□□ 2.66
SNRPA1-215ENST00000561187 PNMA2Q9UL42 364 aa31.65■■■□□ 2.66
SNRPA1-215ENST00000561187 PDE4AP27815 886 aa31.64■■■□□ 2.66
SNRPA1-215ENST00000561187 PURAQ00577 322 aaKnown RBP31.64■■■□□ 2.66
SNRPA1-215ENST00000561187 FAM47CQ5HY64 1035 aa31.64■■■□□ 2.66
SNRPA1-215ENST00000561187 SCLYQ96I15 445 aa31.64■■■□□ 2.66
SNRPA1-215ENST00000561187 ALDH8A1Q9H2A2 487 aaPredicted RBP31.64■■■□□ 2.66
SNRPA1-215ENST00000561187 POLR3EQ9NVU0 708 aa31.64■■■□□ 2.66
SNRPA1-215ENST00000561187 TMEM265A0A087WTH1 108 aa31.63■■■□□ 2.65
SNRPA1-215ENST00000561187 RBM47A0AV96 593 aaKnown RBP31.63■■■□□ 2.65
SNRPA1-215ENST00000561187 CYP2C9P11712 490 aa31.63■■■□□ 2.65
SNRPA1-215ENST00000561187 EDNRBP24530 442 aa31.63■■■□□ 2.65
SNRPA1-215ENST00000561187 CPT1AP50416 773 aa31.63■■■□□ 2.65
SNRPA1-215ENST00000561187 CHMP4BP1P59074 171 aa31.63■■■□□ 2.65
SNRPA1-215ENST00000561187 IRX6P78412 446 aaPredicted RBP31.63■■■□□ 2.65
SNRPA1-215ENST00000561187 OTOP2Q7RTS6 562 aa31.63■■■□□ 2.65
SNRPA1-215ENST00000561187 MPHOSPH6Q99547 160 aaKnown RBP31.63■■■□□ 2.65
SNRPA1-215ENST00000561187 ZNF576Q9H609 170 aa31.63■■■□□ 2.65
SNRPA1-215ENST00000561187 GPHNQ9NQX3 736 aaPredicted RBP31.63■■■□□ 2.65
SNRPA1-215ENST00000561187 LOC102724159A0A0B4J2E5 919 aa31.62■■■□□ 2.65
SNRPA1-215ENST00000561187 ARIH2O95376 493 aa31.62■■■□□ 2.65
SNRPA1-215ENST00000561187 GSPT1P15170 499 aaKnown RBP31.62■■■□□ 2.65
SNRPA1-215ENST00000561187 PWP2Q15269 919 aaKnown RBP31.62■■■□□ 2.65
SNRPA1-215ENST00000561187 QRICH1Q2TAL8 776 aa31.62■■■□□ 2.65
SNRPA1-215ENST00000561187 CCDC178Q5BJE1 867 aa31.62■■■□□ 2.65
SNRPA1-215ENST00000561187 RASIP1Q5U651 963 aa31.62■■■□□ 2.65
SNRPA1-215ENST00000561187 DNERQ8NFT8 737 aa31.62■■■□□ 2.65
SNRPA1-215ENST00000561187 SCFD2Q8WU76 684 aa31.62■■■□□ 2.65
SNRPA1-215ENST00000561187 UBAC1Q9BSL1 405 aa31.62■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms