RNA–Protein interactions for RNA: ENST00000561078.5

SPG21-213, Transcript of SPG21, maspardin, humanhuman

TSL 5

Gene SPG21, Length 1,520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-213ENST00000561078 RAVER2Q9HCJ3 691 aaKnown RBP17.24■□□□□ 0.35
SPG21-213ENST00000561078 RBM28Q9NW13 759 aaKnown RBP17.24■□□□□ 0.35
SPG21-213ENST00000561078 DDX20Q9UHI6 824 aaKnown RBP17.24■□□□□ 0.35
SPG21-213ENST00000561078 RIPK3Q9Y572 518 aa17.24■□□□□ 0.35
SPG21-213ENST00000561078 PPFIA3O75145 1194 aa17.23■□□□□ 0.35
SPG21-213ENST00000561078 MNX1P50219 401 aaPredicted RBP17.23■□□□□ 0.35
SPG21-213ENST00000561078 IKQ13123 557 aaPredicted RBP17.23■□□□□ 0.35
SPG21-213ENST00000561078 MCTP1Q6DN14 999 aa17.23■□□□□ 0.35
SPG21-213ENST00000561078 TRIM22Q8IYM9 498 aa17.23■□□□□ 0.35
SPG21-213ENST00000561078 CTCFLQ8NI51 663 aaPredicted RBP17.23■□□□□ 0.35
SPG21-213ENST00000561078 NR2E3Q9Y5X4 410 aa17.23■□□□□ 0.35
SPG21-213ENST00000561078 DNAJC25-GNG10A0A024R161 153 aa17.22■□□□□ 0.35
SPG21-213ENST00000561078 SEPT4O43236 478 aa17.22■□□□□ 0.35
SPG21-213ENST00000561078 FOSBP53539 338 aa17.22■□□□□ 0.35
SPG21-213ENST00000561078 SSRP1Q08945 709 aaKnown RBP17.22■□□□□ 0.35
SPG21-213ENST00000561078 KCTD1Q719H9 257 aa17.22■□□□□ 0.35
SPG21-213ENST00000561078 ZNF467Q7Z7K2 595 aaPredicted RBP17.22■□□□□ 0.35
SPG21-213ENST00000561078 TINF2Q9BSI4 451 aa17.22■□□□□ 0.35
SPG21-213ENST00000561078 PNMA2Q9UL42 364 aa17.22■□□□□ 0.35
SPG21-213ENST00000561078 PRR12Q9ULL5 1215 aa17.22■□□□□ 0.35
SPG21-213ENST00000561078 ISY1Q9ULR0 285 aaKnown RBP17.22■□□□□ 0.35
SPG21-213ENST00000561078 MYH15Q9Y2K3 1946 aa17.22■□□□□ 0.35
SPG21-213ENST00000561078 PGK2P07205 417 aa17.21■□□□□ 0.35
SPG21-213ENST00000561078 SNHG28P0DPA3 235 aa17.21■□□□□ 0.35
SPG21-213ENST00000561078 IFNAR1P17181 557 aa17.21■□□□□ 0.35
SPG21-213ENST00000561078 CNGA1P29973 690 aa17.21■□□□□ 0.35
SPG21-213ENST00000561078 FOXD4L6Q3SYB3 417 aaPredicted RBP17.21■□□□□ 0.35
SPG21-213ENST00000561078 MAMDC4Q6UXC1 1216 aa17.21■□□□□ 0.35
SPG21-213ENST00000561078 FOXD4L3Q6VB84 417 aaPredicted RBP17.21■□□□□ 0.35
SPG21-213ENST00000561078 TRPV1Q8NER1 839 aa17.21■□□□□ 0.35
SPG21-213ENST00000561078 WASF1Q92558 559 aa17.21■□□□□ 0.35
SPG21-213ENST00000561078 C8orf76Q96K31 380 aa17.21■□□□□ 0.35
SPG21-213ENST00000561078 SLC26A6Q9BXS9 759 aa17.21■□□□□ 0.35
SPG21-213ENST00000561078 C11orf49Q9H6J7 331 aa17.21■□□□□ 0.35
SPG21-213ENST00000561078 COL11A1P12107 1806 aaPredicted RBP17.21■□□□□ 0.35
SPG21-213ENST00000561078 PDE4DIPQ5VU43 2346 aa17.21■□□□□ 0.35
SPG21-213ENST00000561078 ZNF536O15090 1300 aa17.21■□□□□ 0.35
SPG21-213ENST00000561078 STK36Q9NRP7 1315 aa17.21■□□□□ 0.35
SPG21-213ENST00000561078 PDHBP11177 359 aa17.21■□□□□ 0.34
SPG21-213ENST00000561078 KIF5BP33176 963 aa17.21■□□□□ 0.34
SPG21-213ENST00000561078 AKAP17AQ02040 695 aaKnown RBP17.21■□□□□ 0.34
SPG21-213ENST00000561078 CCDC96Q2M329 555 aa17.21■□□□□ 0.34
SPG21-213ENST00000561078 GPATCH4Q5T3I0 446 aaKnown RBP17.21■□□□□ 0.34
SPG21-213ENST00000561078 ANKRD35Q8N283 1001 aa17.21■□□□□ 0.34
SPG21-213ENST00000561078 PNMA1Q8ND90 353 aa17.21■□□□□ 0.34
SPG21-213ENST00000561078 PHKBQ93100 1093 aa17.21■□□□□ 0.34
SPG21-213ENST00000561078 ACAD9Q9H845 621 aa17.21■□□□□ 0.34
SPG21-213ENST00000561078 FAM217BQ9NTX9 383 aaPredicted RBP17.21■□□□□ 0.34
SPG21-213ENST00000561078 SYNGAP1Q96PV0 1343 aa17.2■□□□□ 0.34
SPG21-213ENST00000561078 COL6A1P12109 1028 aa17.2■□□□□ 0.34
SPG21-213ENST00000561078 FDPSP14324 419 aaKnown RBP17.2■□□□□ 0.34
SPG21-213ENST00000561078 TROAPQ12815 778 aa17.2■□□□□ 0.34
SPG21-213ENST00000561078 TRIM29Q14134 588 aa17.2■□□□□ 0.34
SPG21-213ENST00000561078 ARRDC4Q8NCT1 418 aa17.2■□□□□ 0.34
SPG21-213ENST00000561078 DIS3LQ8TF46 1054 aaKnown RBP17.2■□□□□ 0.34
SPG21-213ENST00000561078 RANBP17Q9H2T7 1088 aaKnown RBP17.2■□□□□ 0.34
SPG21-213ENST00000561078 MKI67P46013 3256 aaKnown RBP17.19■□□□□ 0.34
SPG21-213ENST00000561078 EVI5O60447 810 aa17.19■□□□□ 0.34
SPG21-213ENST00000561078 ICAM1P05362 532 aa17.19■□□□□ 0.34
SPG21-213ENST00000561078 ZNF543Q08ER8 600 aa17.19■□□□□ 0.34
SPG21-213ENST00000561078 NTRK3Q16288 839 aa17.19■□□□□ 0.34
SPG21-213ENST00000561078 FERMT3Q86UX7 667 aa17.19■□□□□ 0.34
SPG21-213ENST00000561078 AGBL1Q96MI9 1066 aa17.19■□□□□ 0.34
SPG21-213ENST00000561078 ALG1Q9BT22 464 aa17.19■□□□□ 0.34
SPG21-213ENST00000561078 H0YGN5 161 aa17.18■□□□□ 0.34
SPG21-213ENST00000561078 DNM1LO00429 736 aa17.18■□□□□ 0.34
SPG21-213ENST00000561078 NCLP19338 710 aaKnown RBP17.18■□□□□ 0.34
SPG21-213ENST00000561078 SYDE2Q5VT97 1194 aa17.18■□□□□ 0.34
SPG21-213ENST00000561078 CCDC82Q8N4S0 544 aa17.18■□□□□ 0.34
SPG21-213ENST00000561078 TRERF1Q96PN7 1200 aa17.18■□□□□ 0.34
SPG21-213ENST00000561078 MAP3K14Q99558 947 aa17.18■□□□□ 0.34
SPG21-213ENST00000561078 ZSCAN16Q9H4T2 348 aaPredicted RBP17.18■□□□□ 0.34
SPG21-213ENST00000561078 MTMR7Q9Y216 660 aa17.18■□□□□ 0.34
SPG21-213ENST00000561078 CNPY2Q9Y2B0 182 aa17.18■□□□□ 0.34
SPG21-213ENST00000561078 PFASO15067 1338 aa17.18■□□□□ 0.34
SPG21-213ENST00000561078 GNAQP50148 359 aa17.17■□□□□ 0.34
SPG21-213ENST00000561078 GUCY1B3Q02153 619 aa17.17■□□□□ 0.34
SPG21-213ENST00000561078 TTBK2Q6IQ55 1244 aa17.17■□□□□ 0.34
SPG21-213ENST00000561078 RNF146Q9NTX7 359 aa17.17■□□□□ 0.34
SPG21-213ENST00000561078 DEXIO95424 95 aa17.16■□□□□ 0.34
SPG21-213ENST00000561078 CSPP1Q1MSJ5 1256 aa17.16■□□□□ 0.34
SPG21-213ENST00000561078 PRAMEF19Q5SWL8 479 aa17.16■□□□□ 0.34
SPG21-213ENST00000561078 TMTC3Q6ZXV5 915 aa17.16■□□□□ 0.34
SPG21-213ENST00000561078 CMTR1Q8N1G2 835 aaKnown RBP17.16■□□□□ 0.34
SPG21-213ENST00000561078 RGS22Q8NE09 1264 aa17.16■□□□□ 0.34
SPG21-213ENST00000561078 RNF26Q9BY78 433 aaPredicted RBP17.16■□□□□ 0.34
SPG21-213ENST00000561078 MAF1Q9H063 256 aa17.16■□□□□ 0.34
SPG21-213ENST00000561078 GPCPD1Q9NPB8 672 aa17.16■□□□□ 0.34
SPG21-213ENST00000561078 CCPG1Q9ULG6 757 aa17.16■□□□□ 0.34
SPG21-213ENST00000561078 POTEB2H3BUK9 544 aa17.16■□□□□ 0.34
SPG21-213ENST00000561078 ZNF865P0CJ78 1059 aaPredicted RBP17.16■□□□□ 0.34
SPG21-213ENST00000561078 ALAS1P13196 640 aa17.16■□□□□ 0.34
SPG21-213ENST00000561078 SLC16A2P36021 539 aa17.16■□□□□ 0.34
SPG21-213ENST00000561078 GRM4Q14833 912 aa17.16■□□□□ 0.34
SPG21-213ENST00000561078 SKOR2Q2VWA4 1001 aaPredicted RBP17.16■□□□□ 0.34
SPG21-213ENST00000561078 CCDC174Q6PII3 467 aa17.16■□□□□ 0.34
SPG21-213ENST00000561078 RASGRP2Q7LDG7 609 aa17.16■□□□□ 0.34
SPG21-213ENST00000561078 FAM133AQ8N9E0 248 aa17.16■□□□□ 0.34
SPG21-213ENST00000561078 FBXO18Q8NFZ0 1043 aa17.16■□□□□ 0.34
SPG21-213ENST00000561078 ABHD16BQ9H3Z7 469 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms