RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 PPFIA1Q13136 1202 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 G3BP1Q13283 466 aaKnown RBP eCLIP2.41□□□□□ -2.02
RTF1-207ENST00000561076 LAMC2Q13753 1193 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 BLMHQ13867 455 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 SIM2Q14190 667 aaPredicted RBP2.41□□□□□ -2.02
RTF1-207ENST00000561076 PPP2R5DQ14738 602 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 KIF22Q14807 665 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 STARD3Q14849 445 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 PSMD6Q15008 389 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 POU4F3Q15319 338 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 LLGL1Q15334 1064 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 TERF2Q15554 542 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 ANO4Q32M45 955 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 NBPF9Q3BBW0 867 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 UAP1L1Q3KQV9 507 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 COL13A1Q5TAT6 717 aaPredicted RBP2.41□□□□□ -2.02
RTF1-207ENST00000561076 MFSD4BQ5TF39 518 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 RASIP1Q5U651 963 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 DUSP27Q5VZP5 1158 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 ITPRIPL1Q6GPH6 555 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 CFAP161Q6P656 301 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 ELMSAN1Q6PJG2 1045 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 TMCO3Q6UWJ1 677 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 RFX8Q6ZV50 586 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 GET4Q7L5D6 327 aaPredicted RBP2.41□□□□□ -2.02
RTF1-207ENST00000561076 DPP9Q86TI2 863 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 SAPCD2Q86UD0 394 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 RASSF3Q86WH2 238 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 CMTR2Q8IYT2 770 aaKnown RBP2.41□□□□□ -2.02
RTF1-207ENST00000561076 CHCHD4Q8N4Q1 142 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 MYCT1Q8N699 235 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 C2orf69Q8N8R5 385 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 IGSF22Q8N9C0 903 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 KDF1Q8NAX2 398 aaPredicted RBP2.41□□□□□ -2.02
RTF1-207ENST00000561076 GIMAP8Q8ND71 665 aaPredicted RBP2.41□□□□□ -2.02
RTF1-207ENST00000561076 SMC1BQ8NDV3 1235 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 GSTCDQ8NEC7 633 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 NGDNQ8NEJ9 315 aaKnown RBP2.41□□□□□ -2.02
RTF1-207ENST00000561076 SLC35G2Q8TBE7 412 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 SP7Q8TDD2 431 aaPredicted RBP2.41□□□□□ -2.02
RTF1-207ENST00000561076 DCAF4Q8WV16 495 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 CHTF18Q8WVB6 975 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 C7orf43Q8WVR3 580 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 SLC5A5Q92911 643 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 OSBP2Q969R2 916 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 MARVELD3Q96A59 401 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 ZSCAN31Q96LW9 406 aaPredicted RBP2.41□□□□□ -2.02
RTF1-207ENST00000561076 CCDC74BQ96LY2 380 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 PPM1MQ96MI6 270 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 TBCBQ99426 244 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 SEC62Q99442 399 aaKnown RBP2.41□□□□□ -2.02
RTF1-207ENST00000561076 CRB3Q9BUF7 120 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 DSCC1Q9BVC3 393 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 LACRTQ9GZZ8 138 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 NUP62CLQ9H1M0 184 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 CRISPLD1Q9H336 500 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 PCIF1Q9H4Z3 704 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 CERS4Q9HA82 394 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 EMC7Q9NPA0 242 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 OSGEPQ9NPF4 335 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 ANLNQ9NQW6 1124 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 DDX21Q9NR30 783 aaKnown RBP eCLIP2.41□□□□□ -2.02
RTF1-207ENST00000561076 CLIC5Q9NZA1 410 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 SF3B6Q9Y3B4 125 aaKnown RBP2.41□□□□□ -2.02
RTF1-207ENST00000561076 CSADQ9Y600 493 aa2.41□□□□□ -2.02
RTF1-207ENST00000561076 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.41□□□□□ -2.02
RTF1-207ENST00000561076 ANKRD18BA2A2Z9 1011 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 PTPDC1A2A3K4 754 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 KLRG2A4D1S0 409 aaPredicted RBP2.4□□□□□ -2.03
RTF1-207ENST00000561076 PABPN1LA6NDY0 278 aaKnown RBP2.4□□□□□ -2.03
RTF1-207ENST00000561076 RHPN2P1A8MT19 583 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 C9IYK1 514 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 FAM227AF5H4B4 570 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 H3BRJ5 948 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 H7C1W4 665 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 CBX4O00257 560 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 GOLIM4O00461 696 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 TPP1O14773 563 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 IRAK2O43187 625 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 SPINT1O43278 529 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 DLX3O60479 287 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 TLR5O60602 858 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 ZBED1O96006 694 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 RPN1P04843 607 aaKnown RBP2.4□□□□□ -2.03
RTF1-207ENST00000561076 FAM157BP0CG42 384 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 MYBP10242 640 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 CPB1P15086 417 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 ITIH2P19823 946 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 CDC25BP30305 580 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 HOXC12P31275 282 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 ELF1P32519 619 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 CTSOP43234 321 aaPredicted RBP2.4□□□□□ -2.03
RTF1-207ENST00000561076 GTF2A2P52657 109 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 SLC16A1P53985 500 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 EIF5P55010 431 aaKnown RBP2.4□□□□□ -2.03
RTF1-207ENST00000561076 KRT85P78386 507 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 GPLD1P80108 840 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 AMPD2Q01433 879 aa2.4□□□□□ -2.03
RTF1-207ENST00000561076 PTPN11Q06124 597 aaPredicted RBP2.4□□□□□ -2.03
RTF1-207ENST00000561076 ZNF252P-AS1Q0IIN9 211 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms