RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 ELNP15502 786 aa11.12□□□□□ -0.63
RABGGTA-221ENST00000561055 TAL1P17542 331 aaPredicted RBP11.12□□□□□ -0.63
RABGGTA-221ENST00000561055 CAPN2P17655 700 aa11.12□□□□□ -0.63
RABGGTA-221ENST00000561055 RPS6P62753 249 aaKnown RBP11.12□□□□□ -0.63
RABGGTA-221ENST00000561055 SCRN1Q12765 414 aa11.12□□□□□ -0.63
RABGGTA-221ENST00000561055 BAATQ14032 418 aaPredicted RBP11.12□□□□□ -0.63
RABGGTA-221ENST00000561055 PKN1Q16512 942 aa11.12□□□□□ -0.63
RABGGTA-221ENST00000561055 CCL14Q16627 93 aa11.12□□□□□ -0.63
RABGGTA-221ENST00000561055 PFKFB3Q16875 520 aaPredicted RBP11.12□□□□□ -0.63
RABGGTA-221ENST00000561055 CPLX2Q6PUV4 134 aaKnown RBP11.12□□□□□ -0.63
RABGGTA-221ENST00000561055 NSMFQ6X4W1 530 aa11.12□□□□□ -0.63
RABGGTA-221ENST00000561055 FAM177A1Q8N128 213 aaPredicted RBP11.12□□□□□ -0.63
RABGGTA-221ENST00000561055 GTF3C6Q969F1 213 aa11.12□□□□□ -0.63
RABGGTA-221ENST00000561055 ABHD8Q96I13 439 aa11.12□□□□□ -0.63
RABGGTA-221ENST00000561055 ZSCAN31Q96LW9 406 aaPredicted RBP11.12□□□□□ -0.63
RABGGTA-221ENST00000561055 LARP6Q9BRS8 491 aaKnown RBP11.12□□□□□ -0.63
RABGGTA-221ENST00000561055 NCOA5Q9HCD5 579 aaKnown RBP11.12□□□□□ -0.63
RABGGTA-221ENST00000561055 ADD3Q9UEY8 706 aaKnown RBP11.12□□□□□ -0.63
RABGGTA-221ENST00000561055 NRBP1Q9UHY1 535 aa11.12□□□□□ -0.63
RABGGTA-221ENST00000561055 ASTN1O14525 1302 aa11.11□□□□□ -0.63
RABGGTA-221ENST00000561055 RPTORQ8N122 1335 aa11.11□□□□□ -0.63
RABGGTA-221ENST00000561055 SYNGAP1Q96PV0 1343 aa11.11□□□□□ -0.63
RABGGTA-221ENST00000561055 ASB14A6NK59 587 aa11.11□□□□□ -0.63
RABGGTA-221ENST00000561055 ST18O60284 1047 aa11.11□□□□□ -0.63
RABGGTA-221ENST00000561055 CDKL5O76039 1030 aa11.11□□□□□ -0.63
RABGGTA-221ENST00000561055 LARGE1O95461 756 aa11.11□□□□□ -0.63
RABGGTA-221ENST00000561055 INHAP05111 366 aa11.11□□□□□ -0.63
RABGGTA-221ENST00000561055 MCM2P49736 904 aa11.11□□□□□ -0.63
RABGGTA-221ENST00000561055 UBXN2AP68543 259 aa11.11□□□□□ -0.63
RABGGTA-221ENST00000561055 CNTN2Q02246 1040 aa11.11□□□□□ -0.63
RABGGTA-221ENST00000561055 MFSD14CQ5VZR4 134 aa11.11□□□□□ -0.63
RABGGTA-221ENST00000561055 PPP1R18Q6NYC8 613 aa11.11□□□□□ -0.63
RABGGTA-221ENST00000561055 SH3TC2Q8TF17 1288 aa11.11□□□□□ -0.63
RABGGTA-221ENST00000561055 TBC1D5Q92609 795 aa11.11□□□□□ -0.63
RABGGTA-221ENST00000561055 TINF2Q9BSI4 451 aa11.11□□□□□ -0.63
RABGGTA-221ENST00000561055 SH2B1Q9NRF2 756 aaPredicted RBP11.11□□□□□ -0.63
RABGGTA-221ENST00000561055 BARHL2Q9NY43 387 aa11.11□□□□□ -0.63
RABGGTA-221ENST00000561055 STK36Q9NRP7 1315 aa11.1□□□□□ -0.63
RABGGTA-221ENST00000561055 WDR81Q562E7 1941 aa11.1□□□□□ -0.63
RABGGTA-221ENST00000561055 hCG_1642624A0A1W2PR95 340 aa11.1□□□□□ -0.63
RABGGTA-221ENST00000561055 ESYT2A0FGR8 921 aa11.1□□□□□ -0.63
RABGGTA-221ENST00000561055 PTPDC1A2A3K4 754 aa11.1□□□□□ -0.63
RABGGTA-221ENST00000561055 STXBP3O00186 592 aa11.1□□□□□ -0.63
RABGGTA-221ENST00000561055 MEIS2O14770 477 aa11.1□□□□□ -0.63
RABGGTA-221ENST00000561055 CPLX1O14810 134 aa11.1□□□□□ -0.63
RABGGTA-221ENST00000561055 CTDNEP1O95476 244 aa11.1□□□□□ -0.63
RABGGTA-221ENST00000561055 CYBAP13498 195 aa11.1□□□□□ -0.63
RABGGTA-221ENST00000561055 SCG2P13521 617 aa11.1□□□□□ -0.63
RABGGTA-221ENST00000561055 EDNRBP24530 442 aa11.1□□□□□ -0.63
RABGGTA-221ENST00000561055 CACNB2Q08289 660 aaPredicted RBP11.1□□□□□ -0.63
RABGGTA-221ENST00000561055 SSRP1Q08945 709 aaKnown RBP11.1□□□□□ -0.63
RABGGTA-221ENST00000561055 STK3Q13188 491 aa11.1□□□□□ -0.63
RABGGTA-221ENST00000561055 WWC2Q6AWC2 1192 aa11.1□□□□□ -0.63
RABGGTA-221ENST00000561055 SLC30A10Q6XR72 485 aa11.1□□□□□ -0.63
RABGGTA-221ENST00000561055 TRIM22Q8IYM9 498 aa11.1□□□□□ -0.63
RABGGTA-221ENST00000561055 SYTL5Q8TDW5 730 aaPredicted RBP11.1□□□□□ -0.63
RABGGTA-221ENST00000561055 PIBF1Q8WXW3 757 aa11.1□□□□□ -0.63
RABGGTA-221ENST00000561055 PHKBQ93100 1093 aa11.1□□□□□ -0.63
RABGGTA-221ENST00000561055 GLT8D2Q9H1C3 349 aa11.1□□□□□ -0.63
RABGGTA-221ENST00000561055 HMX1Q9NP08 348 aaPredicted RBP11.1□□□□□ -0.63
RABGGTA-221ENST00000561055 PAK6Q9NQU5 681 aaPredicted RBP11.1□□□□□ -0.63
RABGGTA-221ENST00000561055 SH3GLB2Q9NR46 395 aa11.1□□□□□ -0.63
RABGGTA-221ENST00000561055 COL20A1Q9P218 1284 aa11.1□□□□□ -0.63
RABGGTA-221ENST00000561055 DOCK5Q9H7D0 1870 aa11.09□□□□□ -0.63
RABGGTA-221ENST00000561055 B4DLN1 442 aa11.09□□□□□ -0.63
RABGGTA-221ENST00000561055 GCOM1H8Y6P7 765 aaPredicted RBP11.09□□□□□ -0.63
RABGGTA-221ENST00000561055 DEXIO95424 95 aa11.09□□□□□ -0.63
RABGGTA-221ENST00000561055 SNAI1O95863 264 aaPredicted RBP11.09□□□□□ -0.63
RABGGTA-221ENST00000561055 CFBP00751 764 aa11.09□□□□□ -0.63
RABGGTA-221ENST00000561055 POLR2MP0CAP2 368 aa11.09□□□□□ -0.63
RABGGTA-221ENST00000561055 PRKAR2AP13861 404 aaKnown RBP11.09□□□□□ -0.63
RABGGTA-221ENST00000561055 CYP2C19P33261 490 aa11.09□□□□□ -0.63
RABGGTA-221ENST00000561055 ALDH5A1P51649 535 aaPredicted RBP11.09□□□□□ -0.63
RABGGTA-221ENST00000561055 MRPL12P52815 198 aaKnown RBP11.09□□□□□ -0.63
RABGGTA-221ENST00000561055 AKAP17AQ02040 695 aaKnown RBP11.09□□□□□ -0.63
RABGGTA-221ENST00000561055 ST3GAL1Q11201 340 aa11.09□□□□□ -0.63
RABGGTA-221ENST00000561055 TRIM32Q13049 653 aa11.09□□□□□ -0.63
RABGGTA-221ENST00000561055 TYW1BQ6NUM6 668 aa11.09□□□□□ -0.63
RABGGTA-221ENST00000561055 NSUN6Q8TEA1 469 aaKnown RBP11.09□□□□□ -0.63
RABGGTA-221ENST00000561055 TAAR1Q96RJ0 339 aa11.09□□□□□ -0.63
RABGGTA-221ENST00000561055 IWS1Q96ST2 819 aa11.09□□□□□ -0.63
RABGGTA-221ENST00000561055 LLPHQ9BRT6 129 aaKnown RBP11.09□□□□□ -0.63
RABGGTA-221ENST00000561055 SLC26A6Q9BXS9 759 aa11.09□□□□□ -0.63
RABGGTA-221ENST00000561055 KATNBL1Q9H079 304 aa11.09□□□□□ -0.63
RABGGTA-221ENST00000561055 ZMYND12Q9H0C1 365 aa11.09□□□□□ -0.63
RABGGTA-221ENST00000561055 ABHD16BQ9H3Z7 469 aa11.09□□□□□ -0.63
RABGGTA-221ENST00000561055 RIC8AQ9NPQ8 531 aa11.09□□□□□ -0.63
RABGGTA-221ENST00000561055 FRMPD4Q14CM0 1322 aa11.09□□□□□ -0.63
RABGGTA-221ENST00000561055 CD2BP2O95400 341 aaKnown RBP11.08□□□□□ -0.64
RABGGTA-221ENST00000561055 GJB1P08034 283 aa11.08□□□□□ -0.64
RABGGTA-221ENST00000561055 ZNF865P0CJ78 1059 aaPredicted RBP11.08□□□□□ -0.64
RABGGTA-221ENST00000561055 CCL5P13501 91 aa11.08□□□□□ -0.64
RABGGTA-221ENST00000561055 FDPSP14324 419 aaKnown RBP11.08□□□□□ -0.64
RABGGTA-221ENST00000561055 CALML3P27482 149 aa11.08□□□□□ -0.64
RABGGTA-221ENST00000561055 CLK2P49760 499 aaKnown RBP11.08□□□□□ -0.64
RABGGTA-221ENST00000561055 MTFR1Q15390 333 aa11.08□□□□□ -0.64
RABGGTA-221ENST00000561055 MCTP2Q6DN12 878 aa11.08□□□□□ -0.64
RABGGTA-221ENST00000561055 ARMCX2Q7L311 632 aa11.08□□□□□ -0.64
RABGGTA-221ENST00000561055 HEATR3Q7Z4Q2 680 aa11.08□□□□□ -0.64
RABGGTA-221ENST00000561055 NECAB1Q8N987 351 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms