RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 PRR12Q9ULL5 1215 aa12.63□□□□□ -0.39
TPM1-227ENST00000560970 TRIP12Q14669 1992 aaPredicted RBP12.62□□□□□ -0.39
TPM1-227ENST00000560970 SGSM2O43147 1006 aa12.62□□□□□ -0.39
TPM1-227ENST00000560970 ZEB2O60315 1214 aa12.62□□□□□ -0.39
TPM1-227ENST00000560970 NMT2O60551 498 aa12.62□□□□□ -0.39
TPM1-227ENST00000560970 ICAM1P05362 532 aa12.62□□□□□ -0.39
TPM1-227ENST00000560970 MCCP23508 829 aa12.62□□□□□ -0.39
TPM1-227ENST00000560970 PBX2P40425 430 aa12.62□□□□□ -0.39
TPM1-227ENST00000560970 RAB30Q15771 203 aa12.62□□□□□ -0.39
TPM1-227ENST00000560970 BMP2KLQ5H9B9 411 aa12.62□□□□□ -0.39
TPM1-227ENST00000560970 MUM1L1Q5H9M0 696 aa12.62□□□□□ -0.39
TPM1-227ENST00000560970 SLC43A3Q8NBI5 491 aa12.62□□□□□ -0.39
TPM1-227ENST00000560970 DCAF4Q8WV16 495 aa12.62□□□□□ -0.39
TPM1-227ENST00000560970 GAS2L1Q99501 681 aaPredicted RBP12.62□□□□□ -0.39
TPM1-227ENST00000560970 DSCC1Q9BVC3 393 aa12.62□□□□□ -0.39
TPM1-227ENST00000560970 SEZ6LQ9BYH1 1024 aa12.62□□□□□ -0.39
TPM1-227ENST00000560970 AP5M1Q9H0R1 490 aa12.62□□□□□ -0.39
TPM1-227ENST00000560970 RANBP17Q9H2T7 1088 aaKnown RBP12.62□□□□□ -0.39
TPM1-227ENST00000560970 VTA1Q9NP79 307 aa12.62□□□□□ -0.39
TPM1-227ENST00000560970 IL23AQ9NPF7 189 aa12.62□□□□□ -0.39
TPM1-227ENST00000560970 MYH7BA7E2Y1 1941 aa12.62□□□□□ -0.39
TPM1-227ENST00000560970 NEDD4P46934 1319 aa12.62□□□□□ -0.39
TPM1-227ENST00000560970 ORC4O43929 436 aa12.61□□□□□ -0.39
TPM1-227ENST00000560970 RANBP6O60518 1105 aaKnown RBP12.61□□□□□ -0.39
TPM1-227ENST00000560970 ACRP10323 421 aa12.61□□□□□ -0.39
TPM1-227ENST00000560970 SMPD1P17405 629 aa12.61□□□□□ -0.39
TPM1-227ENST00000560970 CYP2C18P33260 490 aa12.61□□□□□ -0.39
TPM1-227ENST00000560970 PTH1RQ03431 593 aa12.61□□□□□ -0.39
TPM1-227ENST00000560970 ITGA7Q13683 1181 aa12.61□□□□□ -0.39
TPM1-227ENST00000560970 TJAP1Q5JTD0 557 aa12.61□□□□□ -0.39
TPM1-227ENST00000560970 RCSD1Q6JBY9 416 aa12.61□□□□□ -0.39
TPM1-227ENST00000560970 NSMFQ6X4W1 530 aa12.61□□□□□ -0.39
TPM1-227ENST00000560970 ZNF365Q70YC5 407 aa12.61□□□□□ -0.39
TPM1-227ENST00000560970 C16orf59Q7L2K0 433 aa12.61□□□□□ -0.39
TPM1-227ENST00000560970 HERVK_113Q902F9 699 aa12.61□□□□□ -0.39
TPM1-227ENST00000560970 CHMP4CQ96CF2 233 aa12.61□□□□□ -0.39
TPM1-227ENST00000560970 RTN4Q9NQC3 1192 aaKnown RBP12.61□□□□□ -0.39
TPM1-227ENST00000560970 IL17RBQ9NRM6 502 aa12.61□□□□□ -0.39
TPM1-227ENST00000560970 MTMR7Q9Y216 660 aa12.61□□□□□ -0.39
TPM1-227ENST00000560970 UMODL1Q5DID0 1318 aa12.61□□□□□ -0.39
TPM1-227ENST00000560970 LOC102724159A0A0B4J2E5 919 aa12.6□□□□□ -0.39
TPM1-227ENST00000560970 GRXCR1A8MXD5 290 aa12.6□□□□□ -0.39
TPM1-227ENST00000560970 B4GALT4O60513 344 aa12.6□□□□□ -0.39
TPM1-227ENST00000560970 FGRP09769 529 aa12.6□□□□□ -0.39
TPM1-227ENST00000560970 PTGS1P23219 599 aa12.6□□□□□ -0.39
TPM1-227ENST00000560970 NOVP48745 357 aa12.6□□□□□ -0.39
TPM1-227ENST00000560970 ALDH5A1P51649 535 aaPredicted RBP12.6□□□□□ -0.39
TPM1-227ENST00000560970 SNAP25P60880 206 aa12.6□□□□□ -0.39
TPM1-227ENST00000560970 PWP2Q15269 919 aaKnown RBP12.6□□□□□ -0.39
TPM1-227ENST00000560970 TAPT1Q6NXT6 567 aa12.6□□□□□ -0.39
TPM1-227ENST00000560970 EEPD1Q7L9B9 569 aa12.6□□□□□ -0.39
TPM1-227ENST00000560970 MORC4Q8TE76 937 aa12.6□□□□□ -0.39
TPM1-227ENST00000560970 NOC4LQ9BVI4 516 aaKnown RBP12.6□□□□□ -0.39
TPM1-227ENST00000560970 WNT8AQ9H1J5 351 aa12.6□□□□□ -0.39
TPM1-227ENST00000560970 THEGQ9P2T0 379 aa12.6□□□□□ -0.39
TPM1-227ENST00000560970 ADD3Q9UEY8 706 aaKnown RBP12.6□□□□□ -0.39
TPM1-227ENST00000560970 Q9Y3F1 56 aa12.6□□□□□ -0.39
TPM1-227ENST00000560970 DDX49Q9Y6V7 483 aaKnown RBP12.6□□□□□ -0.39
TPM1-227ENST00000560970 AKNAD1Q5T1N1 836 aa12.59□□□□□ -0.39
TPM1-227ENST00000560970 SYDE2Q5VT97 1194 aa12.59□□□□□ -0.39
TPM1-227ENST00000560970 IQSEC1Q6DN90 963 aa12.59□□□□□ -0.39
TPM1-227ENST00000560970 SLC30A10Q6XR72 485 aa12.59□□□□□ -0.39
TPM1-227ENST00000560970 RUFY2Q8WXA3 655 aa12.59□□□□□ -0.39
TPM1-227ENST00000560970 PRDM12Q9H4Q4 367 aa12.59□□□□□ -0.39
TPM1-227ENST00000560970 PDGFCQ9NRA1 345 aa12.59□□□□□ -0.39
TPM1-227ENST00000560970 CXXC1Q9P0U4 656 aaPredicted RBP12.59□□□□□ -0.39
TPM1-227ENST00000560970 MSRAQ9UJ68 235 aa12.59□□□□□ -0.39
TPM1-227ENST00000560970 XIRP2A4UGR9 3374 aa12.59□□□□□ -0.39
TPM1-227ENST00000560970 NLRC5Q86WI3 1866 aa12.59□□□□□ -0.39
TPM1-227ENST00000560970 GRIN2DO15399 1336 aa12.59□□□□□ -0.39
TPM1-227ENST00000560970 MICAL3Q7RTP6 2002 aa12.59□□□□□ -0.39
TPM1-227ENST00000560970 TCF20Q9UGU0 1960 aaKnown RBP12.58□□□□□ -0.4
TPM1-227ENST00000560970 TET1Q8NFU7 2136 aa12.58□□□□□ -0.4
TPM1-227ENST00000560970 NFIBO00712 420 aa12.58□□□□□ -0.4
TPM1-227ENST00000560970 DYNC1LI2O43237 492 aaPredicted RBP12.58□□□□□ -0.4
TPM1-227ENST00000560970 PFKMP08237 780 aa12.58□□□□□ -0.4
TPM1-227ENST00000560970 TOP1P11387 765 aaKnown RBP12.58□□□□□ -0.4
TPM1-227ENST00000560970 CPT1AP50416 773 aa12.58□□□□□ -0.4
TPM1-227ENST00000560970 PSMC6P62333 389 aa12.58□□□□□ -0.4
TPM1-227ENST00000560970 DUSP28Q4G0W2 176 aa12.58□□□□□ -0.4
TPM1-227ENST00000560970 RRP12Q5JTH9 1297 aaKnown RBP12.58□□□□□ -0.4
TPM1-227ENST00000560970 BTNL9Q6UXG8 535 aa12.58□□□□□ -0.4
TPM1-227ENST00000560970 ESYT1Q9BSJ8 1104 aa12.58□□□□□ -0.4
TPM1-227ENST00000560970 TOMM22Q9NS69 142 aa12.58□□□□□ -0.4
TPM1-227ENST00000560970 POLR3EQ9NVU0 708 aa12.58□□□□□ -0.4
TPM1-227ENST00000560970 TAF6LQ9Y6J9 622 aa12.58□□□□□ -0.4
TPM1-227ENST00000560970 FRMPD2Q68DX3 1309 aaPredicted RBP12.58□□□□□ -0.4
TPM1-227ENST00000560970 WDR19Q8NEZ3 1342 aa12.58□□□□□ -0.4
TPM1-227ENST00000560970 DOCK5Q9H7D0 1870 aa12.57□□□□□ -0.4
TPM1-227ENST00000560970 PTPDC1A2A3K4 754 aa12.57□□□□□ -0.4
TPM1-227ENST00000560970 ZNF213O14771 459 aa12.57□□□□□ -0.4
TPM1-227ENST00000560970 FGBP02675 491 aa12.57□□□□□ -0.4
TPM1-227ENST00000560970 PDHBP11177 359 aa12.57□□□□□ -0.4
TPM1-227ENST00000560970 SLC16A2P36021 539 aa12.57□□□□□ -0.4
TPM1-227ENST00000560970 CCL23P55773 120 aa12.57□□□□□ -0.4
TPM1-227ENST00000560970 KIAA1211Q6ZU35 1233 aa12.57□□□□□ -0.4
TPM1-227ENST00000560970 OTOP2Q7RTS6 562 aa12.57□□□□□ -0.4
TPM1-227ENST00000560970 PURBQ96QR8 312 aaKnown RBP12.57□□□□□ -0.4
TPM1-227ENST00000560970 MPHOSPH6Q99547 160 aaKnown RBP12.57□□□□□ -0.4
TPM1-227ENST00000560970 LSG1Q9H089 658 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms