RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 CALML3P27482 149 aa13.12□□□□□ -0.31
GABPB1-210ENST00000560825 CST5P28325 142 aaPredicted RBP13.12□□□□□ -0.31
GABPB1-210ENST00000560825 CDK7P50613 346 aa13.12□□□□□ -0.31
GABPB1-210ENST00000560825 ALDH5A1P51649 535 aaPredicted RBP13.12□□□□□ -0.31
GABPB1-210ENST00000560825 MFAP1P55081 439 aaKnown RBP13.12□□□□□ -0.31
GABPB1-210ENST00000560825 ANTXR2P58335 489 aa13.12□□□□□ -0.31
GABPB1-210ENST00000560825 TNFAIP2Q03169 654 aa13.12□□□□□ -0.31
GABPB1-210ENST00000560825 IMMTQ16891 758 aaKnown RBP13.12□□□□□ -0.31
GABPB1-210ENST00000560825 CXCL17Q6UXB2 119 aa13.12□□□□□ -0.31
GABPB1-210ENST00000560825 DGKHQ86XP1 1220 aa13.12□□□□□ -0.31
GABPB1-210ENST00000560825 ADGRF4Q8IZF3 695 aa13.12□□□□□ -0.31
GABPB1-210ENST00000560825 MORC4Q8TE76 937 aa13.12□□□□□ -0.31
GABPB1-210ENST00000560825 COPS5Q92905 334 aa13.12□□□□□ -0.31
GABPB1-210ENST00000560825 RNF41Q9H4P4 317 aaPredicted RBP13.12□□□□□ -0.31
GABPB1-210ENST00000560825 CLTBP09497 229 aa13.11□□□□□ -0.31
GABPB1-210ENST00000560825 PCP11498 1178 aaKnown RBP13.11□□□□□ -0.31
GABPB1-210ENST00000560825 PSMC6P62333 389 aa13.11□□□□□ -0.31
GABPB1-210ENST00000560825 RPS6P62753 249 aaKnown RBP13.11□□□□□ -0.31
GABPB1-210ENST00000560825 CDC37Q16543 378 aaPredicted RBP13.11□□□□□ -0.31
GABPB1-210ENST00000560825 GNASQ5JWF2 1037 aa13.11□□□□□ -0.31
GABPB1-210ENST00000560825 PPP4R3BQ5MIZ7 849 aa13.11□□□□□ -0.31
GABPB1-210ENST00000560825 TLK2Q86UE8 772 aa13.11□□□□□ -0.31
GABPB1-210ENST00000560825 TSEN34Q9BSV6 310 aaKnown RBP13.11□□□□□ -0.31
GABPB1-210ENST00000560825 JMJD4Q9H9V9 463 aa13.11□□□□□ -0.31
GABPB1-210ENST00000560825 VAT1LQ9HCJ6 419 aa13.11□□□□□ -0.31
GABPB1-210ENST00000560825 STARD7Q9NQZ5 370 aa13.11□□□□□ -0.31
GABPB1-210ENST00000560825 UMODL1Q5DID0 1318 aa13.1□□□□□ -0.31
GABPB1-210ENST00000560825 HIP1O00291 1037 aa13.1□□□□□ -0.31
GABPB1-210ENST00000560825 SGSM2O43147 1006 aa13.1□□□□□ -0.31
GABPB1-210ENST00000560825 DYNC1LI2O43237 492 aaPredicted RBP13.1□□□□□ -0.31
GABPB1-210ENST00000560825 ARIH2O95376 493 aa13.1□□□□□ -0.31
GABPB1-210ENST00000560825 NKX3-2P78367 333 aa13.1□□□□□ -0.31
GABPB1-210ENST00000560825 QRICH1Q2TAL8 776 aa13.1□□□□□ -0.31
GABPB1-210ENST00000560825 C16orf59Q7L2K0 433 aa13.1□□□□□ -0.31
GABPB1-210ENST00000560825 ANKRD33Q7Z3H0 272 aa13.1□□□□□ -0.31
GABPB1-210ENST00000560825 DEFB123Q8N688 67 aa13.1□□□□□ -0.31
GABPB1-210ENST00000560825 FAM161BQ96MY7 647 aa13.1□□□□□ -0.31
GABPB1-210ENST00000560825 LBHD1Q9BQE6 289 aaPredicted RBP13.1□□□□□ -0.31
GABPB1-210ENST00000560825 KAT14Q9H8E8 782 aa13.1□□□□□ -0.31
GABPB1-210ENST00000560825 MAD2L2Q9UI95 211 aa13.1□□□□□ -0.31
GABPB1-210ENST00000560825 TBX21Q9UL17 535 aa13.1□□□□□ -0.31
GABPB1-210ENST00000560825 PTPRSQ13332 1948 aa13.1□□□□□ -0.31
GABPB1-210ENST00000560825 ASB14A6NK59 587 aa13.09□□□□□ -0.31
GABPB1-210ENST00000560825 E7EWF7 191 aa13.09□□□□□ -0.31
GABPB1-210ENST00000560825 KIAA0355O15063 1070 aa13.09□□□□□ -0.31
GABPB1-210ENST00000560825 FAM109BQ6ICB4 259 aaPredicted RBP13.09□□□□□ -0.31
GABPB1-210ENST00000560825 RNF207Q6ZRF8 634 aa13.09□□□□□ -0.31
GABPB1-210ENST00000560825 KIAA1211Q6ZU35 1233 aa13.09□□□□□ -0.31
GABPB1-210ENST00000560825 NOL8Q76FK4 1167 aaKnown RBP13.09□□□□□ -0.31
GABPB1-210ENST00000560825 FAM126BQ8IXS8 530 aa13.09□□□□□ -0.31
GABPB1-210ENST00000560825 TAAR1Q96RJ0 339 aa13.09□□□□□ -0.31
GABPB1-210ENST00000560825 SCN10AQ9Y5Y9 1956 aa13.09□□□□□ -0.31
GABPB1-210ENST00000560825 XIRP2A4UGR9 3374 aa13.09□□□□□ -0.31
GABPB1-210ENST00000560825 WDR19Q8NEZ3 1342 aa13.09□□□□□ -0.31
GABPB1-210ENST00000560825 MOXD2PA6NHM9 499 aa13.08□□□□□ -0.32
GABPB1-210ENST00000560825 TRANK1O15050 2925 aa13.08□□□□□ -0.32
GABPB1-210ENST00000560825 CYTH3O43739 400 aa13.08□□□□□ -0.32
GABPB1-210ENST00000560825 ATXN8OSP0DMR3 200 aa13.08□□□□□ -0.32
GABPB1-210ENST00000560825 EDNRBP24530 442 aa13.08□□□□□ -0.32
GABPB1-210ENST00000560825 FSCN1Q16658 493 aaKnown RBP13.08□□□□□ -0.32
GABPB1-210ENST00000560825 IQCA1Q86XH1 822 aa13.08□□□□□ -0.32
GABPB1-210ENST00000560825 VWCEQ96DN2 955 aa13.08□□□□□ -0.32
GABPB1-210ENST00000560825 TMEM39AQ9NV64 488 aa13.08□□□□□ -0.32
GABPB1-210ENST00000560825 PRKAG2Q9UGJ0 569 aa13.08□□□□□ -0.32
GABPB1-210ENST00000560825 RAD50Q92878 1312 aa13.08□□□□□ -0.32
GABPB1-210ENST00000560825 TANC1Q9C0D5 1861 aa13.08□□□□□ -0.32
GABPB1-210ENST00000560825 RBM47A0AV96 593 aaKnown RBP13.07□□□□□ -0.32
GABPB1-210ENST00000560825 ARVCFO00192 962 aa13.07□□□□□ -0.32
GABPB1-210ENST00000560825 CD4P01730 458 aa13.07□□□□□ -0.32
GABPB1-210ENST00000560825 GPATCH4Q5T3I0 446 aaKnown RBP13.07□□□□□ -0.32
GABPB1-210ENST00000560825 IFIT1BQ5T764 474 aaKnown RBP13.07□□□□□ -0.32
GABPB1-210ENST00000560825 SLC43A3Q8NBI5 491 aa13.07□□□□□ -0.32
GABPB1-210ENST00000560825 SYTL5Q8TDW5 730 aaPredicted RBP13.07□□□□□ -0.32
GABPB1-210ENST00000560825 MAP4K1Q92918 833 aa13.07□□□□□ -0.32
GABPB1-210ENST00000560825 ZFP91Q96JP5 570 aaPredicted RBP13.07□□□□□ -0.32
GABPB1-210ENST00000560825 GUCD1Q96NT3 240 aa13.07□□□□□ -0.32
GABPB1-210ENST00000560825 MYL10Q9BUA6 226 aa13.07□□□□□ -0.32
GABPB1-210ENST00000560825 WDR11Q9BZH6 1224 aa13.07□□□□□ -0.32
GABPB1-210ENST00000560825 PPP1R12CQ9BZL4 782 aa13.07□□□□□ -0.32
GABPB1-210ENST00000560825 KRT23Q9C075 422 aa13.07□□□□□ -0.32
GABPB1-210ENST00000560825 LSG1Q9H089 658 aaKnown RBP13.07□□□□□ -0.32
GABPB1-210ENST00000560825 TRPV6Q9H1D0 765 aa13.07□□□□□ -0.32
GABPB1-210ENST00000560825 MTMR10Q9NXD2 777 aa13.07□□□□□ -0.32
GABPB1-210ENST00000560825 CTNNA3Q9UI47 895 aa13.07□□□□□ -0.32
GABPB1-210ENST00000560825 ELP1O95163 1332 aa13.07□□□□□ -0.32
GABPB1-210ENST00000560825 TRIP12Q14669 1992 aaPredicted RBP13.07□□□□□ -0.32
GABPB1-210ENST00000560825 PALM3A6NDB9 673 aaPredicted RBP13.06□□□□□ -0.32
GABPB1-210ENST00000560825 PARP1P09874 1014 aaKnown RBP13.06□□□□□ -0.32
GABPB1-210ENST00000560825 CYP2C18P33260 490 aa13.06□□□□□ -0.32
GABPB1-210ENST00000560825 DUSP28Q4G0W2 176 aa13.06□□□□□ -0.32
GABPB1-210ENST00000560825 IQSEC1Q6DN90 963 aa13.06□□□□□ -0.32
GABPB1-210ENST00000560825 MB21D2Q8IYB1 491 aaPredicted RBP13.06□□□□□ -0.32
GABPB1-210ENST00000560825 PCSK9Q8NBP7 692 aaKnown RBP13.06□□□□□ -0.32
GABPB1-210ENST00000560825 NUP133Q8WUM0 1156 aa13.06□□□□□ -0.32
GABPB1-210ENST00000560825 VTI1AQ96AJ9 217 aa13.06□□□□□ -0.32
GABPB1-210ENST00000560825 MTMR8Q96EF0 704 aa13.06□□□□□ -0.32
GABPB1-210ENST00000560825 GLT1D1Q96MS3 346 aa13.06□□□□□ -0.32
GABPB1-210ENST00000560825 TOX2Q96NM4 488 aa13.06□□□□□ -0.32
GABPB1-210ENST00000560825 UBAC1Q9BSL1 405 aa13.06□□□□□ -0.32
GABPB1-210ENST00000560825 TTYH1Q9H313 450 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms