RNA–Protein interactions for RNA: ENST00000560734.5

SHF-208, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3 BASIC

Gene SHF, Length 1,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-208ENST00000560734 CDC25AP30304 524 aa28.26■■■□□ 2.12
SHF-208ENST00000560734 AMPD3Q01432 767 aa28.26■■■□□ 2.12
SHF-208ENST00000560734 PRIMPOLQ96LW4 560 aa28.26■■■□□ 2.12
SHF-208ENST00000560734 MBOAT7Q96N66 472 aa28.26■■■□□ 2.12
SHF-208ENST00000560734 STK17AQ9UEE5 414 aa28.26■■■□□ 2.12
SHF-208ENST00000560734 PP2D1A8MPX8 630 aa28.26■■■□□ 2.11
SHF-208ENST00000560734 TECP42680 631 aa28.26■■■□□ 2.11
SHF-208ENST00000560734 UBE2SQ16763 222 aa28.26■■■□□ 2.11
SHF-208ENST00000560734 SGIP1Q9BQI5 828 aa28.26■■■□□ 2.11
SHF-208ENST00000560734 RWDD2AQ9UIY3 292 aa28.26■■■□□ 2.11
SHF-208ENST00000560734 SYNRGQ9UMZ2 1314 aa28.25■■■□□ 2.11
SHF-208ENST00000560734 RAD21O60216 631 aa28.25■■■□□ 2.11
SHF-208ENST00000560734 CD44P16070 742 aaKnown RBP28.25■■■□□ 2.11
SHF-208ENST00000560734 TNFAIP1Q13829 316 aa28.25■■■□□ 2.11
SHF-208ENST00000560734 FILIP1Q7Z7B0 1213 aa28.25■■■□□ 2.11
SHF-208ENST00000560734 DPF2Q92785 391 aa28.25■■■□□ 2.11
SHF-208ENST00000560734 C7orf25Q9BPX7 421 aa28.25■■■□□ 2.11
SHF-208ENST00000560734 KCND1Q9NSA2 647 aa28.25■■■□□ 2.11
SHF-208ENST00000560734 LRWD1Q9UFC0 647 aa28.25■■■□□ 2.11
SHF-208ENST00000560734 TDP2O95551 362 aa28.24■■■□□ 2.11
SHF-208ENST00000560734 CASP1P29466 404 aa28.24■■■□□ 2.11
SHF-208ENST00000560734 CAP2P40123 477 aa28.24■■■□□ 2.11
SHF-208ENST00000560734 LRMPQ12912 555 aa28.24■■■□□ 2.11
SHF-208ENST00000560734 VSTM4Q8IW00 320 aa28.24■■■□□ 2.11
SHF-208ENST00000560734 MMTAG2Q9BU76 263 aaKnown RBP28.24■■■□□ 2.11
SHF-208ENST00000560734 BLZF1Q9H2G9 400 aa28.24■■■□□ 2.11
SHF-208ENST00000560734 DDX25Q9UHL0 483 aaKnown RBP28.24■■■□□ 2.11
SHF-208ENST00000560734 SLC37A4O43826 429 aa28.23■■■□□ 2.11
SHF-208ENST00000560734 RHOBTB3O94955 611 aa28.23■■■□□ 2.11
SHF-208ENST00000560734 PLCG1P19174 1290 aa28.23■■■□□ 2.11
SHF-208ENST00000560734 PPP1R2P41236 205 aa28.23■■■□□ 2.11
SHF-208ENST00000560734 TXKP42681 527 aa28.23■■■□□ 2.11
SHF-208ENST00000560734 STAT2P52630 851 aa28.23■■■□□ 2.11
SHF-208ENST00000560734 CDKAL1Q5VV42 579 aa28.23■■■□□ 2.11
SHF-208ENST00000560734 TMC6Q7Z403 805 aa28.23■■■□□ 2.11
SHF-208ENST00000560734 CRYGNQ8WXF5 182 aa28.23■■■□□ 2.11
SHF-208ENST00000560734 CCDC47Q96A33 483 aaKnown RBP28.23■■■□□ 2.11
SHF-208ENST00000560734 CTAGE1Q96RT6 745 aa28.23■■■□□ 2.11
SHF-208ENST00000560734 TMEM39BQ9GZU3 492 aa28.23■■■□□ 2.11
SHF-208ENST00000560734 PIK3CDO00329 1044 aa28.23■■■□□ 2.11
SHF-208ENST00000560734 MEIS2O14770 477 aa28.23■■■□□ 2.11
SHF-208ENST00000560734 ASNSP08243 561 aa28.23■■■□□ 2.11
SHF-208ENST00000560734 CDK11BP21127 795 aaKnown RBP28.23■■■□□ 2.11
SHF-208ENST00000560734 KCNJ6P48051 423 aa28.23■■■□□ 2.11
SHF-208ENST00000560734 CHURC1Q8WUH1 139 aa28.23■■■□□ 2.11
SHF-208ENST00000560734 STAMQ92783 540 aa28.23■■■□□ 2.11
SHF-208ENST00000560734 ANO3Q9BYT9 981 aa28.22■■■□□ 2.11
SHF-208ENST00000560734 LRRC27Q9C0I9 530 aa28.22■■■□□ 2.11
SHF-208ENST00000560734 VCPKMTQ9H867 229 aa28.22■■■□□ 2.11
SHF-208ENST00000560734 PRR12Q9ULL5 1215 aa28.22■■■□□ 2.11
SHF-208ENST00000560734 NRDCO43847 1150 aa28.21■■■□□ 2.11
SHF-208ENST00000560734 IKQ13123 557 aaPredicted RBP28.21■■■□□ 2.11
SHF-208ENST00000560734 CNNM4Q6P4Q7 775 aa28.21■■■□□ 2.11
SHF-208ENST00000560734 FAM160B2Q86V87 743 aa28.21■■■□□ 2.11
SHF-208ENST00000560734 NUP88Q99567 741 aaPredicted RBP28.21■■■□□ 2.11
SHF-208ENST00000560734 KLRC4O43908 158 aa28.21■■■□□ 2.11
SHF-208ENST00000560734 CCZ1BP86790 482 aa28.21■■■□□ 2.11
SHF-208ENST00000560734 CCZ1P86791 482 aaPredicted RBP28.21■■■□□ 2.11
SHF-208ENST00000560734 NBPF9Q3BBW0 867 aa28.21■■■□□ 2.11
SHF-208ENST00000560734 TBX3O15119 743 aa28.2■■■□□ 2.1
SHF-208ENST00000560734 SKILP12757 684 aa28.2■■■□□ 2.1
SHF-208ENST00000560734 SPAG1Q07617 926 aa28.2■■■□□ 2.1
SHF-208ENST00000560734 PAK1Q13153 545 aa28.2■■■□□ 2.1
SHF-208ENST00000560734 COBLL1Q53SF7 1204 aa28.2■■■□□ 2.1
SHF-208ENST00000560734 KRT79Q5XKE5 535 aa28.2■■■□□ 2.1
SHF-208ENST00000560734 TRMT44Q8IYL2 757 aaKnown RBP28.2■■■□□ 2.1
SHF-208ENST00000560734 GIMAP8Q8ND71 665 aaPredicted RBP28.2■■■□□ 2.1
SHF-208ENST00000560734 A0A1B0GTH6 734 aa28.19■■■□□ 2.1
SHF-208ENST00000560734 USP17L15C9J2P7 530 aa28.19■■■□□ 2.1
SHF-208ENST00000560734 USP17L13C9JLJ4 530 aa28.19■■■□□ 2.1
SHF-208ENST00000560734 USP17L11C9JVI0 530 aa28.19■■■□□ 2.1
SHF-208ENST00000560734 USP17L18D6R9N7 530 aa28.19■■■□□ 2.1
SHF-208ENST00000560734 USP17L22D6RA61 530 aa28.19■■■□□ 2.1
SHF-208ENST00000560734 USP17L17D6RBQ6 530 aa28.19■■■□□ 2.1
SHF-208ENST00000560734 USP17L19D6RCP7 530 aa28.19■■■□□ 2.1
SHF-208ENST00000560734 USP17L20D6RJB6 530 aa28.19■■■□□ 2.1
SHF-208ENST00000560734 FZD9O00144 591 aa28.19■■■□□ 2.1
SHF-208ENST00000560734 SFPQP23246 707 aaKnown RBP eCLIP28.19■■■□□ 2.1
SHF-208ENST00000560734 ECE1P42892 770 aa28.19■■■□□ 2.1
SHF-208ENST00000560734 USP17L24Q0WX57 530 aa28.19■■■□□ 2.1
SHF-208ENST00000560734 USP17L6PQ6QN14 398 aa28.19■■■□□ 2.1
SHF-208ENST00000560734 ADSSL1Q8N142 457 aa28.19■■■□□ 2.1
SHF-208ENST00000560734 ACER1Q8TDN7 264 aa28.19■■■□□ 2.1
SHF-208ENST00000560734 HAS1Q92839 578 aa28.19■■■□□ 2.1
SHF-208ENST00000560734 TRIM9Q9C026 710 aa28.19■■■□□ 2.1
SHF-208ENST00000560734 KCNMB3Q9NPA1 279 aa28.19■■■□□ 2.1
SHF-208ENST00000560734 MYH7BA7E2Y1 1941 aa28.18■■■□□ 2.1
SHF-208ENST00000560734 DYNC1I1O14576 645 aa28.18■■■□□ 2.1
SHF-208ENST00000560734 STIM1Q13586 685 aa28.18■■■□□ 2.1
SHF-208ENST00000560734 NR1I3Q14994 352 aa28.18■■■□□ 2.1
SHF-208ENST00000560734 KMT5BQ4FZB7 885 aa28.18■■■□□ 2.1
SHF-208ENST00000560734 HYIQ5T013 277 aa28.18■■■□□ 2.1
SHF-208ENST00000560734 SLFN12Q8IYM2 578 aa28.18■■■□□ 2.1
SHF-208ENST00000560734 CCDC112Q8NEF3 446 aa28.18■■■□□ 2.1
SHF-208ENST00000560734 SAMSN1Q9NSI8 373 aaKnown RBP28.18■■■□□ 2.1
SHF-208ENST00000560734 STK24Q9Y6E0 443 aa28.18■■■□□ 2.1
SHF-208ENST00000560734 LRRC10BA6NIK2 292 aa28.18■■■□□ 2.1
SHF-208ENST00000560734 SREBF1P36956 1147 aa28.18■■■□□ 2.1
SHF-208ENST00000560734 GRB10Q13322 594 aa28.18■■■□□ 2.1
SHF-208ENST00000560734 Q4G0T1 1027 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms