RNA–Protein interactions for RNA: ENST00000560619.2

SNRPCP18-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 18, humanhuman

BASIC

Gene SNRPCP18, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP18-201ENST00000560619 RPS6P62753 249 aaKnown RBP12.86□□□□□ -0.35
SNRPCP18-201ENST00000560619 BAATQ14032 418 aaPredicted RBP12.86□□□□□ -0.35
SNRPCP18-201ENST00000560619 PFKFB3Q16875 520 aaPredicted RBP12.86□□□□□ -0.35
SNRPCP18-201ENST00000560619 USH1GQ495M9 461 aa12.86□□□□□ -0.35
SNRPCP18-201ENST00000560619 HOMER1Q86YM7 354 aa12.86□□□□□ -0.35
SNRPCP18-201ENST00000560619 TRIM22Q8IYM9 498 aa12.86□□□□□ -0.35
SNRPCP18-201ENST00000560619 ABHD8Q96I13 439 aa12.86□□□□□ -0.35
SNRPCP18-201ENST00000560619 TINF2Q9BSI4 451 aa12.86□□□□□ -0.35
SNRPCP18-201ENST00000560619 SH2B1Q9NRF2 756 aaPredicted RBP12.86□□□□□ -0.35
SNRPCP18-201ENST00000560619 HOMER2Q9NSB8 354 aa12.86□□□□□ -0.35
SNRPCP18-201ENST00000560619 NAP1L2Q9ULW6 460 aaPredicted RBP12.86□□□□□ -0.35
SNRPCP18-201ENST00000560619 V9GY48 417 aaPredicted RBP12.86□□□□□ -0.35
SNRPCP18-201ENST00000560619 RBBP6Q7Z6E9 1792 aaKnown RBP12.86□□□□□ -0.35
SNRPCP18-201ENST00000560619 ESYT2A0FGR8 921 aa12.85□□□□□ -0.35
SNRPCP18-201ENST00000560619 MSCO60682 206 aa12.85□□□□□ -0.35
SNRPCP18-201ENST00000560619 CD2BP2O95400 341 aaKnown RBP12.85□□□□□ -0.35
SNRPCP18-201ENST00000560619 PGK2P07205 417 aa12.85□□□□□ -0.35
SNRPCP18-201ENST00000560619 SLC4A3P48751 1232 aa12.85□□□□□ -0.35
SNRPCP18-201ENST00000560619 AKAP17AQ02040 695 aaKnown RBP12.85□□□□□ -0.35
SNRPCP18-201ENST00000560619 MCTP2Q6DN12 878 aa12.85□□□□□ -0.35
SNRPCP18-201ENST00000560619 NSMFQ6X4W1 530 aa12.85□□□□□ -0.35
SNRPCP18-201ENST00000560619 CCDC12Q8WUD4 166 aaPredicted RBP12.85□□□□□ -0.35
SNRPCP18-201ENST00000560619 IWS1Q96ST2 819 aa12.85□□□□□ -0.35
SNRPCP18-201ENST00000560619 SH3GLB2Q9NR46 395 aa12.85□□□□□ -0.35
SNRPCP18-201ENST00000560619 BARHL2Q9NY43 387 aa12.85□□□□□ -0.35
SNRPCP18-201ENST00000560619 STK36Q9NRP7 1315 aa12.85□□□□□ -0.35
SNRPCP18-201ENST00000560619 PTPDC1A2A3K4 754 aa12.84□□□□□ -0.35
SNRPCP18-201ENST00000560619 GCOM1H8Y6P7 765 aaPredicted RBP12.84□□□□□ -0.35
SNRPCP18-201ENST00000560619 OPLAHO14841 1288 aa12.84□□□□□ -0.35
SNRPCP18-201ENST00000560619 ECM2O94769 699 aaPredicted RBP12.84□□□□□ -0.35
SNRPCP18-201ENST00000560619 DEXIO95424 95 aa12.84□□□□□ -0.35
SNRPCP18-201ENST00000560619 INHAP05111 366 aa12.84□□□□□ -0.35
SNRPCP18-201ENST00000560619 HSP90AA1P07900 732 aaKnown RBP12.84□□□□□ -0.35
SNRPCP18-201ENST00000560619 POLR2MP0CAP2 368 aa12.84□□□□□ -0.35
SNRPCP18-201ENST00000560619 SCG2P13521 617 aa12.84□□□□□ -0.35
SNRPCP18-201ENST00000560619 ELNP15502 786 aa12.84□□□□□ -0.35
SNRPCP18-201ENST00000560619 CCT2P78371 535 aaKnown RBP12.84□□□□□ -0.35
SNRPCP18-201ENST00000560619 SSRP1Q08945 709 aaKnown RBP12.84□□□□□ -0.35
SNRPCP18-201ENST00000560619 SCRN1Q12765 414 aa12.84□□□□□ -0.35
SNRPCP18-201ENST00000560619 ME3Q16798 604 aa12.84□□□□□ -0.35
SNRPCP18-201ENST00000560619 RAB11FIP4Q86YS3 637 aa12.84□□□□□ -0.35
SNRPCP18-201ENST00000560619 CMTR1Q8N1G2 835 aaKnown RBP12.84□□□□□ -0.35
SNRPCP18-201ENST00000560619 SYTL5Q8TDW5 730 aaPredicted RBP12.84□□□□□ -0.35
SNRPCP18-201ENST00000560619 NSUN6Q8TEA1 469 aaKnown RBP12.84□□□□□ -0.35
SNRPCP18-201ENST00000560619 GTF3C6Q969F1 213 aa12.84□□□□□ -0.35
SNRPCP18-201ENST00000560619 FGD4Q96M96 766 aa12.84□□□□□ -0.35
SNRPCP18-201ENST00000560619 LLPHQ9BRT6 129 aaKnown RBP12.84□□□□□ -0.35
SNRPCP18-201ENST00000560619 ABHD16BQ9H3Z7 469 aa12.84□□□□□ -0.35
SNRPCP18-201ENST00000560619 HMX1Q9NP08 348 aaPredicted RBP12.84□□□□□ -0.35
SNRPCP18-201ENST00000560619 PAK6Q9NQU5 681 aaPredicted RBP12.84□□□□□ -0.35
SNRPCP18-201ENST00000560619 FLRT1Q9NZU1 646 aa12.84□□□□□ -0.35
SNRPCP18-201ENST00000560619 BIN2Q9UBW5 565 aaPredicted RBP12.84□□□□□ -0.35
SNRPCP18-201ENST00000560619 SOWAHBA6NEL2 793 aa12.83□□□□□ -0.36
SNRPCP18-201ENST00000560619 GJB1P08034 283 aa12.83□□□□□ -0.36
SNRPCP18-201ENST00000560619 EDNRBP24530 442 aa12.83□□□□□ -0.36
SNRPCP18-201ENST00000560619 CACNB2Q08289 660 aaPredicted RBP12.83□□□□□ -0.36
SNRPCP18-201ENST00000560619 PKN1Q16512 942 aa12.83□□□□□ -0.36
SNRPCP18-201ENST00000560619 CCL14Q16627 93 aa12.83□□□□□ -0.36
SNRPCP18-201ENST00000560619 CCDC82Q8N4S0 544 aa12.83□□□□□ -0.36
SNRPCP18-201ENST00000560619 SH3TC2Q8TF17 1288 aa12.83□□□□□ -0.36
SNRPCP18-201ENST00000560619 CUL5Q93034 780 aa12.83□□□□□ -0.36
SNRPCP18-201ENST00000560619 LARP6Q9BRS8 491 aaKnown RBP12.83□□□□□ -0.36
SNRPCP18-201ENST00000560619 TMEM106CQ9BVX2 250 aa12.83□□□□□ -0.36
SNRPCP18-201ENST00000560619 ZMYND12Q9H0C1 365 aa12.83□□□□□ -0.36
SNRPCP18-201ENST00000560619 PSTPIP2Q9H939 334 aa12.83□□□□□ -0.36
SNRPCP18-201ENST00000560619 LCTP09848 1927 aa12.83□□□□□ -0.36
SNRPCP18-201ENST00000560619 KIAA0100Q14667 2235 aaKnown RBP12.82□□□□□ -0.36
SNRPCP18-201ENST00000560619 STAM2O75886 525 aa12.82□□□□□ -0.36
SNRPCP18-201ENST00000560619 CFBP00751 764 aa12.82□□□□□ -0.36
SNRPCP18-201ENST00000560619 FOSP01100 380 aaPredicted RBP12.82□□□□□ -0.36
SNRPCP18-201ENST00000560619 CYBAP13498 195 aa12.82□□□□□ -0.36
SNRPCP18-201ENST00000560619 PRKAR2AP13861 404 aaKnown RBP12.82□□□□□ -0.36
SNRPCP18-201ENST00000560619 GNA11P29992 359 aa12.82□□□□□ -0.36
SNRPCP18-201ENST00000560619 ALDH5A1P51649 535 aaPredicted RBP12.82□□□□□ -0.36
SNRPCP18-201ENST00000560619 CNTN2Q02246 1040 aa12.82□□□□□ -0.36
SNRPCP18-201ENST00000560619 WWC2Q6AWC2 1192 aa12.82□□□□□ -0.36
SNRPCP18-201ENST00000560619 GALNT17Q6IS24 598 aa12.82□□□□□ -0.36
SNRPCP18-201ENST00000560619 XRRA1Q6P2D8 792 aa12.82□□□□□ -0.36
SNRPCP18-201ENST00000560619 CCDC148Q8NFR7 591 aa12.82□□□□□ -0.36
SNRPCP18-201ENST00000560619 WASF1Q92558 559 aa12.82□□□□□ -0.36
SNRPCP18-201ENST00000560619 TMX3Q96JJ7 454 aa12.82□□□□□ -0.36
SNRPCP18-201ENST00000560619 NCOA5Q9HCD5 579 aaKnown RBP12.82□□□□□ -0.36
SNRPCP18-201ENST00000560619 VTA1Q9NP79 307 aa12.82□□□□□ -0.36
SNRPCP18-201ENST00000560619 RIC8AQ9NPQ8 531 aa12.82□□□□□ -0.36
SNRPCP18-201ENST00000560619 CNPY2Q9Y2B0 182 aa12.82□□□□□ -0.36
SNRPCP18-201ENST00000560619 FRMPD4Q14CM0 1322 aa12.82□□□□□ -0.36
SNRPCP18-201ENST00000560619 STXBP3O00186 592 aa12.81□□□□□ -0.36
SNRPCP18-201ENST00000560619 MEIS2O14770 477 aa12.81□□□□□ -0.36
SNRPCP18-201ENST00000560619 SEPT4O43236 478 aa12.81□□□□□ -0.36
SNRPCP18-201ENST00000560619 SNAI1O95863 264 aaPredicted RBP12.81□□□□□ -0.36
SNRPCP18-201ENST00000560619 CCL5P13501 91 aa12.81□□□□□ -0.36
SNRPCP18-201ENST00000560619 XBP1P17861 261 aa12.81□□□□□ -0.36
SNRPCP18-201ENST00000560619 CALML3P27482 149 aa12.81□□□□□ -0.36
SNRPCP18-201ENST00000560619 CYP2C19P33261 490 aa12.81□□□□□ -0.36
SNRPCP18-201ENST00000560619 SLC30A10Q6XR72 485 aa12.81□□□□□ -0.36
SNRPCP18-201ENST00000560619 ARMCX2Q7L311 632 aa12.81□□□□□ -0.36
SNRPCP18-201ENST00000560619 HEATR3Q7Z4Q2 680 aa12.81□□□□□ -0.36
SNRPCP18-201ENST00000560619 BICD2Q8TD16 824 aa12.81□□□□□ -0.36
SNRPCP18-201ENST00000560619 TBC1D5Q92609 795 aa12.81□□□□□ -0.36
SNRPCP18-201ENST00000560619 RMDN3Q96TC7 470 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms