RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 BAATQ14032 418 aaPredicted RBP11.94□□□□□ -0.5
SNRPA1-212ENST00000560496 FSCN1Q16658 493 aaKnown RBP11.94□□□□□ -0.5
SNRPA1-212ENST00000560496 MFSD5Q6N075 450 aa11.94□□□□□ -0.5
SNRPA1-212ENST00000560496 CXCL17Q6UXB2 119 aa11.94□□□□□ -0.5
SNRPA1-212ENST00000560496 MFSD6Q6ZSS7 791 aa11.94□□□□□ -0.5
SNRPA1-212ENST00000560496 EEPD1Q7L9B9 569 aa11.94□□□□□ -0.5
SNRPA1-212ENST00000560496 TTC14Q96N46 770 aa11.94□□□□□ -0.5
SNRPA1-212ENST00000560496 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.94□□□□□ -0.52e-8■□□□□ 10.7
SNRPA1-212ENST00000560496 ZKSCAN3Q9BRR0 538 aa11.94□□□□□ -0.5
SNRPA1-212ENST00000560496 RWDD1Q9H446 243 aaPredicted RBP11.94□□□□□ -0.5
SNRPA1-212ENST00000560496 COL4A4P53420 1690 aaPredicted RBP11.94□□□□□ -0.5
SNRPA1-212ENST00000560496 UMODL1Q5DID0 1318 aa11.93□□□□□ -0.5
SNRPA1-212ENST00000560496 TMEM265A0A087WTH1 108 aa11.93□□□□□ -0.5
SNRPA1-212ENST00000560496 LOC102724159A0A0B4J2E5 919 aa11.93□□□□□ -0.5
SNRPA1-212ENST00000560496 GSPT1P15170 499 aaKnown RBP11.93□□□□□ -0.5
SNRPA1-212ENST00000560496 MFAP1P55081 439 aaKnown RBP11.93□□□□□ -0.5
SNRPA1-212ENST00000560496 PWP2Q15269 919 aaKnown RBP11.93□□□□□ -0.5
SNRPA1-212ENST00000560496 RASIP1Q5U651 963 aa11.93□□□□□ -0.5
SNRPA1-212ENST00000560496 CWC27Q6UX04 472 aaKnown RBP11.93□□□□□ -0.5
SNRPA1-212ENST00000560496 C16orf59Q7L2K0 433 aa11.93□□□□□ -0.5
SNRPA1-212ENST00000560496 ESR2Q92731 530 aa11.93□□□□□ -0.5
SNRPA1-212ENST00000560496 CDX2Q99626 313 aaPredicted RBP11.93□□□□□ -0.5
SNRPA1-212ENST00000560496 DSCC1Q9BVC3 393 aa11.93□□□□□ -0.5
SNRPA1-212ENST00000560496 PPP1R12CQ9BZL4 782 aa11.93□□□□□ -0.5
SNRPA1-212ENST00000560496 CPVLQ9H3G5 476 aa11.93□□□□□ -0.5
SNRPA1-212ENST00000560496 RNF41Q9H4P4 317 aaPredicted RBP11.93□□□□□ -0.5
SNRPA1-212ENST00000560496 Q9Y3F1 56 aa11.93□□□□□ -0.5
SNRPA1-212ENST00000560496 CUL9Q8IWT3 2517 aa11.92□□□□□ -0.5
SNRPA1-212ENST00000560496 RBM47A0AV96 593 aaKnown RBP11.92□□□□□ -0.5
SNRPA1-212ENST00000560496 PTPDC1A2A3K4 754 aa11.92□□□□□ -0.5
SNRPA1-212ENST00000560496 KDM4AO75164 1064 aa11.92□□□□□ -0.5
SNRPA1-212ENST00000560496 CABYRO75952 493 aa11.92□□□□□ -0.5
SNRPA1-212ENST00000560496 GOLGA8HP0CJ92 632 aa11.92□□□□□ -0.5
SNRPA1-212ENST00000560496 CSF2RAP15509 400 aa11.92□□□□□ -0.5
SNRPA1-212ENST00000560496 DNAJB2P25686 324 aa11.92□□□□□ -0.5
SNRPA1-212ENST00000560496 PDE4AP27815 886 aa11.92□□□□□ -0.5
SNRPA1-212ENST00000560496 RPS6P62753 249 aaKnown RBP11.92□□□□□ -0.5
SNRPA1-212ENST00000560496 PPIGQ13427 754 aaKnown RBP eCLIP11.92□□□□□ -0.52e-11■■□□□ 12.5
SNRPA1-212ENST00000560496 DUSP28Q4G0W2 176 aa11.92□□□□□ -0.5
SNRPA1-212ENST00000560496 TMEM240Q5SV17 173 aa11.92□□□□□ -0.5
SNRPA1-212ENST00000560496 GPATCH4Q5T3I0 446 aaKnown RBP11.92□□□□□ -0.5
SNRPA1-212ENST00000560496 PNMA1Q8ND90 353 aa11.92□□□□□ -0.5
SNRPA1-212ENST00000560496 MYLIPQ8WY64 445 aa11.92□□□□□ -0.5
SNRPA1-212ENST00000560496 SEMA6BQ9H3T3 888 aa11.92□□□□□ -0.5
SNRPA1-212ENST00000560496 DIAPH3Q9NSV4 1193 aa11.92□□□□□ -0.5
SNRPA1-212ENST00000560496 ADD3Q9UEY8 706 aaKnown RBP11.92□□□□□ -0.5
SNRPA1-212ENST00000560496 TNKSO95271 1327 aa11.91□□□□□ -0.5
SNRPA1-212ENST00000560496 B4E1Z4 1266 aa11.91□□□□□ -0.5
SNRPA1-212ENST00000560496 DLL1O00548 723 aa11.91□□□□□ -0.5
SNRPA1-212ENST00000560496 ZNF213O14771 459 aa11.91□□□□□ -0.5
SNRPA1-212ENST00000560496 TLR3O15455 904 aaKnown RBP11.91□□□□□ -0.5
SNRPA1-212ENST00000560496 DYNC1LI2O43237 492 aaPredicted RBP11.91□□□□□ -0.5
SNRPA1-212ENST00000560496 B4GALT4O60513 344 aa11.91□□□□□ -0.5
SNRPA1-212ENST00000560496 CALML3P27482 149 aa11.91□□□□□ -0.5
SNRPA1-212ENST00000560496 NT5C2P49902 561 aa11.91□□□□□ -0.5
SNRPA1-212ENST00000560496 PSMC6P62333 389 aa11.91□□□□□ -0.5
SNRPA1-212ENST00000560496 ITGA7Q13683 1181 aa11.91□□□□□ -0.5
SNRPA1-212ENST00000560496 CDC37Q16543 378 aaPredicted RBP11.91□□□□□ -0.5
SNRPA1-212ENST00000560496 IQSEC1Q6DN90 963 aa11.91□□□□□ -0.5
SNRPA1-212ENST00000560496 RNF207Q6ZRF8 634 aa11.91□□□□□ -0.5
SNRPA1-212ENST00000560496 KIAA1211Q6ZU35 1233 aa11.91□□□□□ -0.5
SNRPA1-212ENST00000560496 NOL8Q76FK4 1167 aaKnown RBP11.91□□□□□ -0.5
SNRPA1-212ENST00000560496 DGKHQ86XP1 1220 aa11.91□□□□□ -0.5
SNRPA1-212ENST00000560496 ENAHQ8N8S7 591 aaPredicted RBP11.91□□□□□ -0.5
SNRPA1-212ENST00000560496 VWCEQ96DN2 955 aa11.91□□□□□ -0.5
SNRPA1-212ENST00000560496 WNT8AQ9H1J5 351 aa11.91□□□□□ -0.5
SNRPA1-212ENST00000560496 HIP1O00291 1037 aa11.9□□□□□ -0.5
SNRPA1-212ENST00000560496 ARIH2O95376 493 aa11.9□□□□□ -0.5
SNRPA1-212ENST00000560496 CYP2C18P33260 490 aa11.9□□□□□ -0.5
SNRPA1-212ENST00000560496 PURAQ00577 322 aaKnown RBP11.9□□□□□ -0.5
SNRPA1-212ENST00000560496 USH1GQ495M9 461 aa11.9□□□□□ -0.5
SNRPA1-212ENST00000560496 PSRC1Q6PGN9 363 aaPredicted RBP11.9□□□□□ -0.5
SNRPA1-212ENST00000560496 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.9□□□□□ -0.5
SNRPA1-212ENST00000560496 DNERQ8NFT8 737 aa11.9□□□□□ -0.5
SNRPA1-212ENST00000560496 ANKS1AQ92625 1134 aa11.9□□□□□ -0.5
SNRPA1-212ENST00000560496 VTI1AQ96AJ9 217 aa11.9□□□□□ -0.5
SNRPA1-212ENST00000560496 NOC4LQ9BVI4 516 aaKnown RBP11.9□□□□□ -0.5
SNRPA1-212ENST00000560496 WDR11Q9BZH6 1224 aa11.9□□□□□ -0.5
SNRPA1-212ENST00000560496 UBA5Q9GZZ9 404 aa11.9□□□□□ -0.5
SNRPA1-212ENST00000560496 AP5M1Q9H0R1 490 aa11.9□□□□□ -0.5
SNRPA1-212ENST00000560496 HIPK3Q9H422 1215 aa11.9□□□□□ -0.5
SNRPA1-212ENST00000560496 COL20A1Q9P218 1284 aa11.9□□□□□ -0.5
SNRPA1-212ENST00000560496 RAD50Q92878 1312 aa11.89□□□□□ -0.51
SNRPA1-212ENST00000560496 DOCK5Q9H7D0 1870 aa11.89□□□□□ -0.51
SNRPA1-212ENST00000560496 ACRP10323 421 aa11.89□□□□□ -0.51
SNRPA1-212ENST00000560496 PPP2R5BQ15173 497 aa11.89□□□□□ -0.51
SNRPA1-212ENST00000560496 ASPRV1Q53RT3 343 aa11.89□□□□□ -0.51
SNRPA1-212ENST00000560496 IQCA1Q86XH1 822 aa11.89□□□□□ -0.51
SNRPA1-212ENST00000560496 TMEM199Q8N511 208 aa11.89□□□□□ -0.51
SNRPA1-212ENST00000560496 OR6J1Q8NGC5 347 aa11.89□□□□□ -0.51
SNRPA1-212ENST00000560496 MAFAQ8NHW3 353 aaPredicted RBP11.89□□□□□ -0.51
SNRPA1-212ENST00000560496 SP7Q8TDD2 431 aaPredicted RBP11.89□□□□□ -0.51
SNRPA1-212ENST00000560496 COPS5Q92905 334 aa11.89□□□□□ -0.51
SNRPA1-212ENST00000560496 ZSCAN10Q96SZ4 725 aaPredicted RBP11.89□□□□□ -0.51
SNRPA1-212ENST00000560496 PBX4Q9BYU1 374 aa11.89□□□□□ -0.51
SNRPA1-212ENST00000560496 TRPV6Q9H1D0 765 aa11.89□□□□□ -0.51
SNRPA1-212ENST00000560496 ALDH8A1Q9H2A2 487 aaPredicted RBP11.89□□□□□ -0.51
SNRPA1-212ENST00000560496 KAT14Q9H8E8 782 aa11.89□□□□□ -0.51
SNRPA1-212ENST00000560496 IL23AQ9NPF7 189 aa11.89□□□□□ -0.51
SNRPA1-212ENST00000560496 PNMA2Q9UL42 364 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms