RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 ACRP10323 421 aa5.35□□□□□ -1.55
SPG11-222ENST00000560435 C6P13671 934 aa5.35□□□□□ -1.55
SPG11-222ENST00000560435 SLC9A5Q14940 896 aa5.35□□□□□ -1.55
SPG11-222ENST00000560435 TDRD10Q5VZ19 366 aaKnown RBP5.35□□□□□ -1.55
SPG11-222ENST00000560435 SLITRK4Q8IW52 837 aa5.35□□□□□ -1.55
SPG11-222ENST00000560435 FIBCD1Q8N539 461 aa5.35□□□□□ -1.55
SPG11-222ENST00000560435 LINC00482Q8N8I6 264 aa5.35□□□□□ -1.55
SPG11-222ENST00000560435 NETO2Q8NC67 525 aa5.35□□□□□ -1.55
SPG11-222ENST00000560435 DVL3Q92997 716 aaPredicted RBP5.35□□□□□ -1.55
SPG11-222ENST00000560435 PEX11GQ96HA9 241 aa5.35□□□□□ -1.55
SPG11-222ENST00000560435 NUDT5Q9UKK9 219 aa5.35□□□□□ -1.55
SPG11-222ENST00000560435 SF3B6Q9Y3B4 125 aaKnown RBP5.35□□□□□ -1.55
SPG11-222ENST00000560435 FAM86C2PA6NEL3 165 aa5.34□□□□□ -1.55
SPG11-222ENST00000560435 CD3EP07766 207 aa5.34□□□□□ -1.55
SPG11-222ENST00000560435 IFNGR1P15260 489 aa5.34□□□□□ -1.55
SPG11-222ENST00000560435 TACR2P21452 398 aa5.34□□□□□ -1.55
SPG11-222ENST00000560435 HMGA2P52926 109 aa5.34□□□□□ -1.55
SPG11-222ENST00000560435 DCAF15Q66K64 600 aa5.34□□□□□ -1.55
SPG11-222ENST00000560435 PPFIBP1Q86W92 1011 aa5.34□□□□□ -1.55
SPG11-222ENST00000560435 TAB3Q8N5C8 712 aaPredicted RBP5.34□□□□□ -1.55
SPG11-222ENST00000560435 BRF1Q92994 677 aa5.34□□□□□ -1.55
SPG11-222ENST00000560435 NKD1Q969G9 470 aa5.34□□□□□ -1.55
SPG11-222ENST00000560435 ZBTB8AQ96BR9 441 aa5.34□□□□□ -1.55
SPG11-222ENST00000560435 SCAND2PQ9GZW5 306 aaPredicted RBP5.34□□□□□ -1.55
SPG11-222ENST00000560435 RXFP1Q9HBX9 757 aa5.34□□□□□ -1.55
SPG11-222ENST00000560435 SMARCA5O60264 1052 aaPredicted RBP5.33□□□□□ -1.56
SPG11-222ENST00000560435 ZBTB7AO95365 584 aa5.33□□□□□ -1.56
SPG11-222ENST00000560435 GDF5P43026 501 aa5.33□□□□□ -1.56
SPG11-222ENST00000560435 POU4F1Q01851 419 aa5.33□□□□□ -1.56
SPG11-222ENST00000560435 AXDND1Q5T1B0 1012 aaPredicted RBP5.33□□□□□ -1.56
SPG11-222ENST00000560435 RCSD1Q6JBY9 416 aa5.33□□□□□ -1.56
SPG11-222ENST00000560435 LGI4Q8N135 537 aa5.33□□□□□ -1.56
SPG11-222ENST00000560435 LZTR1Q8N653 840 aa5.33□□□□□ -1.56
SPG11-222ENST00000560435 CHST13Q8NET6 341 aa5.33□□□□□ -1.56
SPG11-222ENST00000560435 TRAIPQ9BWF2 469 aa5.33□□□□□ -1.56
SPG11-222ENST00000560435 SSBP3Q9BWW4 388 aaPredicted RBP5.33□□□□□ -1.56
SPG11-222ENST00000560435 NT5C1AQ9BXI3 368 aa5.33□□□□□ -1.56
SPG11-222ENST00000560435 ITGA4P13612 1032 aa5.32□□□□□ -1.56
SPG11-222ENST00000560435 CD247P20963 164 aa5.32□□□□□ -1.56
SPG11-222ENST00000560435 TAGLNQ01995 201 aaKnown RBP5.32□□□□□ -1.56
SPG11-222ENST00000560435 KIAA2012Q0VF49 1180 aa5.32□□□□□ -1.56
SPG11-222ENST00000560435 SMAD4Q13485 552 aaKnown RBP5.32□□□□□ -1.56
SPG11-222ENST00000560435 RGL3Q3MIN7 710 aa5.32□□□□□ -1.56
SPG11-222ENST00000560435 FAM26FQ5R3K3 315 aa5.32□□□□□ -1.56
SPG11-222ENST00000560435 FBLN5Q9UBX5 448 aa5.32□□□□□ -1.56
SPG11-222ENST00000560435 GGT7Q9UJ14 662 aa5.32□□□□□ -1.56
SPG11-222ENST00000560435 ZNRF3Q9ULT6 936 aa5.32□□□□□ -1.56
SPG11-222ENST00000560435 A0A087WZG4 1122 aa5.31□□□□□ -1.56
SPG11-222ENST00000560435 CYR61O00622 381 aa5.31□□□□□ -1.56
SPG11-222ENST00000560435 SLPIP03973 132 aa5.31□□□□□ -1.56
SPG11-222ENST00000560435 CYP2C8P10632 490 aa5.31□□□□□ -1.56
SPG11-222ENST00000560435 IMPDH2P12268 514 aa5.31□□□□□ -1.56
SPG11-222ENST00000560435 RPL13P26373 211 aaKnown RBP5.31□□□□□ -1.56
SPG11-222ENST00000560435 THBS2P35442 1172 aa5.31□□□□□ -1.56
SPG11-222ENST00000560435 EEF1DP3Q658K8 133 aa5.31□□□□□ -1.56
SPG11-222ENST00000560435 BORAQ6PGQ7 559 aa5.31□□□□□ -1.56
SPG11-222ENST00000560435 CRIP3Q6Q6R5 217 aa5.31□□□□□ -1.56
SPG11-222ENST00000560435 HS2ST1Q7LGA3 356 aa5.31□□□□□ -1.56
SPG11-222ENST00000560435 Q8N1X5 172 aa5.31□□□□□ -1.56
SPG11-222ENST00000560435 DDX11Q96FC9 970 aa5.31□□□□□ -1.56
SPG11-222ENST00000560435 ZDHHC15Q96MV8 337 aa5.31□□□□□ -1.56
SPG11-222ENST00000560435 GORASP1Q9BQQ3 440 aa5.31□□□□□ -1.56
SPG11-222ENST00000560435 NOL6Q9H6R4 1146 aaKnown RBP5.31□□□□□ -1.56
SPG11-222ENST00000560435 PCDH18Q9HCL0 1135 aa5.31□□□□□ -1.56
SPG11-222ENST00000560435 INVSQ9Y283 1065 aa5.31□□□□□ -1.56
SPG11-222ENST00000560435 RWDD3Q9Y3V2 267 aa5.31□□□□□ -1.56
SPG11-222ENST00000560435 ZNF451Q9Y4E5 1061 aa5.31□□□□□ -1.56
SPG11-222ENST00000560435 MROH6A6NGR9 719 aa5.3□□□□□ -1.56
SPG11-222ENST00000560435 C8BP07358 591 aa5.3□□□□□ -1.56
SPG11-222ENST00000560435 ACVRL1P37023 503 aa5.3□□□□□ -1.56
SPG11-222ENST00000560435 KRTAP1-1Q07627 177 aa5.3□□□□□ -1.56
SPG11-222ENST00000560435 GLB1LQ6UWU2 654 aa5.3□□□□□ -1.56
SPG11-222ENST00000560435 FAM124AQ86V42 546 aa5.3□□□□□ -1.56
SPG11-222ENST00000560435 SH3RF3Q8TEJ3 882 aaPredicted RBP5.3□□□□□ -1.56
SPG11-222ENST00000560435 KISS1RQ969F8 398 aaPredicted RBP5.3□□□□□ -1.56
SPG11-222ENST00000560435 TM9SF2Q99805 663 aa5.3□□□□□ -1.56
SPG11-222ENST00000560435 MTA3Q9BTC8 594 aa5.3□□□□□ -1.56
SPG11-222ENST00000560435 MENTQ9BUN1 341 aa5.3□□□□□ -1.56
SPG11-222ENST00000560435 MRIQ9BWK5 157 aa5.3□□□□□ -1.56
SPG11-222ENST00000560435 ST6GALNAC2Q9UJ37 374 aa5.3□□□□□ -1.56
SPG11-222ENST00000560435 DIS3Q9Y2L1 958 aaKnown RBP5.3□□□□□ -1.56
SPG11-222ENST00000560435 TSC22D4Q9Y3Q8 395 aa5.3□□□□□ -1.56
SPG11-222ENST00000560435 AURKAO14965 403 aa5.29□□□□□ -1.56
SPG11-222ENST00000560435 TP53P04637 393 aaPredicted RBP5.29□□□□□ -1.56
SPG11-222ENST00000560435 RBM10P98175 930 aaKnown RBP5.29□□□□□ -1.56
SPG11-222ENST00000560435 CDSNQ15517 529 aa5.29□□□□□ -1.56
SPG11-222ENST00000560435 WWC2Q6AWC2 1192 aa5.29□□□□□ -1.56
SPG11-222ENST00000560435 ERICH6Q7L0X2 663 aa5.29□□□□□ -1.56
SPG11-222ENST00000560435 SPRED1Q7Z699 444 aa5.29□□□□□ -1.56
SPG11-222ENST00000560435 C11orf84Q9BUA3 381 aaPredicted RBP5.29□□□□□ -1.56
SPG11-222ENST00000560435 ZNF536O15090 1300 aa5.28□□□□□ -1.56
SPG11-222ENST00000560435 TCEAL1Q15170 157 aa5.28□□□□□ -1.56
SPG11-222ENST00000560435 KYQ8NBH2 561 aa5.28□□□□□ -1.56
SPG11-222ENST00000560435 MCMBPQ9BTE3 642 aa5.28□□□□□ -1.56
SPG11-222ENST00000560435 SLITRK6Q9H5Y7 841 aa5.28□□□□□ -1.56
SPG11-222ENST00000560435 CBFA2T2O43439 604 aa5.27□□□□□ -1.57
SPG11-222ENST00000560435 PPP1R11O60927 126 aaPredicted RBP5.27□□□□□ -1.57
SPG11-222ENST00000560435 SURF1Q15526 300 aa5.27□□□□□ -1.57
SPG11-222ENST00000560435 C9orf131Q5VYM1 1079 aa5.27□□□□□ -1.57
SPG11-222ENST00000560435 LIMS2Q7Z4I7 341 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms