RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 MCOLN1Q9GZU1 580 aa13.89□□□□□ -0.19
RABGGTA-215ENST00000560207 BARHL2Q9NY43 387 aa13.89□□□□□ -0.19
RABGGTA-215ENST00000560207 PEX10O60683 326 aa13.88□□□□□ -0.19
RABGGTA-215ENST00000560207 CYP2B6P20813 491 aa13.88□□□□□ -0.19
RABGGTA-215ENST00000560207 HSD17B4P51659 736 aa13.88□□□□□ -0.19
RABGGTA-215ENST00000560207 SNAP25P60880 206 aa13.88□□□□□ -0.19
RABGGTA-215ENST00000560207 HMGN5P82970 282 aaKnown RBP13.88□□□□□ -0.19
RABGGTA-215ENST00000560207 SCRN1Q12765 414 aa13.88□□□□□ -0.19
RABGGTA-215ENST00000560207 RAB11FIP4Q86YS3 637 aa13.88□□□□□ -0.19
RABGGTA-215ENST00000560207 CCDC82Q8N4S0 544 aa13.88□□□□□ -0.19
RABGGTA-215ENST00000560207 FAM133AQ8N9E0 248 aa13.88□□□□□ -0.19
RABGGTA-215ENST00000560207 ARMC5Q96C12 935 aa13.88□□□□□ -0.19
RABGGTA-215ENST00000560207 MAML3Q96JK9 1138 aa13.88□□□□□ -0.19
RABGGTA-215ENST00000560207 IWS1Q96ST2 819 aa13.88□□□□□ -0.19
RABGGTA-215ENST00000560207 PSTPIP2Q9H939 334 aa13.88□□□□□ -0.19
RABGGTA-215ENST00000560207 EHMT1Q9H9B1 1298 aa13.88□□□□□ -0.19
RABGGTA-215ENST00000560207 GABRQQ9UN88 632 aa13.88□□□□□ -0.19
RABGGTA-215ENST00000560207 PTCH2Q9Y6C5 1203 aa13.88□□□□□ -0.19
RABGGTA-215ENST00000560207 MSCO60682 206 aa13.87□□□□□ -0.19
RABGGTA-215ENST00000560207 FOSP01100 380 aaPredicted RBP13.87□□□□□ -0.19
RABGGTA-215ENST00000560207 CALML3P27482 149 aa13.87□□□□□ -0.19
RABGGTA-215ENST00000560207 NAPAP54920 295 aa13.87□□□□□ -0.19
RABGGTA-215ENST00000560207 RPS6P62753 249 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-215ENST00000560207 STK3Q13188 491 aa13.87□□□□□ -0.19
RABGGTA-215ENST00000560207 BAATQ14032 418 aaPredicted RBP13.87□□□□□ -0.19
RABGGTA-215ENST00000560207 ME3Q16798 604 aa13.87□□□□□ -0.19
RABGGTA-215ENST00000560207 SLC35G1Q2M3R5 365 aa13.87□□□□□ -0.19
RABGGTA-215ENST00000560207 MUM1L1Q5H9M0 696 aa13.87□□□□□ -0.19
RABGGTA-215ENST00000560207 XRRA1Q6P2D8 792 aa13.87□□□□□ -0.19
RABGGTA-215ENST00000560207 HEATR3Q7Z4Q2 680 aa13.87□□□□□ -0.19
RABGGTA-215ENST00000560207 CMTR1Q8N1G2 835 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-215ENST00000560207 NSUN6Q8TEA1 469 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-215ENST00000560207 TINF2Q9BSI4 451 aa13.87□□□□□ -0.19
RABGGTA-215ENST00000560207 SLC26A6Q9BXS9 759 aa13.87□□□□□ -0.19
RABGGTA-215ENST00000560207 C6orf50Q9HD87 102 aa13.87□□□□□ -0.19
RABGGTA-215ENST00000560207 BIN2Q9UBW5 565 aaPredicted RBP13.87□□□□□ -0.19
RABGGTA-215ENST00000560207 CNPY2Q9Y2B0 182 aa13.87□□□□□ -0.19
RABGGTA-215ENST00000560207 KIAA1217Q5T5P2 1943 aa13.87□□□□□ -0.19
RABGGTA-215ENST00000560207 MCM3APO60318 1980 aa13.87□□□□□ -0.19
RABGGTA-215ENST00000560207 LCTP09848 1927 aa13.86□□□□□ -0.19
RABGGTA-215ENST00000560207 NFIBO00712 420 aa13.86□□□□□ -0.19
RABGGTA-215ENST00000560207 PPP1R11O60927 126 aaPredicted RBP13.86□□□□□ -0.19
RABGGTA-215ENST00000560207 COBLO75128 1261 aa13.86□□□□□ -0.19
RABGGTA-215ENST00000560207 STAM2O75886 525 aa13.86□□□□□ -0.19
RABGGTA-215ENST00000560207 CFBP00751 764 aa13.86□□□□□ -0.19
RABGGTA-215ENST00000560207 SMARCC2Q8TAQ2 1214 aa13.86□□□□□ -0.19
RABGGTA-215ENST00000560207 ABHD16BQ9H3Z7 469 aa13.86□□□□□ -0.19
RABGGTA-215ENST00000560207 NCOA5Q9HCD5 579 aaKnown RBP13.86□□□□□ -0.19
RABGGTA-215ENST00000560207 RPTORQ8N122 1335 aa13.86□□□□□ -0.19
RABGGTA-215ENST00000560207 IGHA2P01877 340 aa13.85□□□□□ -0.19
RABGGTA-215ENST00000560207 ADCY7P51828 1080 aa13.85□□□□□ -0.19
RABGGTA-215ENST00000560207 CAP1Q01518 475 aa13.85□□□□□ -0.19
RABGGTA-215ENST00000560207 AP3B2Q13367 1082 aa13.85□□□□□ -0.19
RABGGTA-215ENST00000560207 TNS4Q8IZW8 715 aa13.85□□□□□ -0.19
RABGGTA-215ENST00000560207 MORC4Q8TE76 937 aa13.85□□□□□ -0.19
RABGGTA-215ENST00000560207 SNX21Q969T3 373 aa13.85□□□□□ -0.19
RABGGTA-215ENST00000560207 ZMYND12Q9H0C1 365 aa13.85□□□□□ -0.19
RABGGTA-215ENST00000560207 HMX1Q9NP08 348 aaPredicted RBP13.85□□□□□ -0.19
RABGGTA-215ENST00000560207 RIC8AQ9NPQ8 531 aa13.85□□□□□ -0.19
RABGGTA-215ENST00000560207 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.85□□□□□ -0.19
RABGGTA-215ENST00000560207 SMCO2A6NFE2 343 aa13.84□□□□□ -0.19
RABGGTA-215ENST00000560207 SPDYE3A6NKU9 549 aa13.84□□□□□ -0.19
RABGGTA-215ENST00000560207 STXBP3O00186 592 aa13.84□□□□□ -0.19
RABGGTA-215ENST00000560207 ECM2O94769 699 aaPredicted RBP13.84□□□□□ -0.19
RABGGTA-215ENST00000560207 PGK2P07205 417 aa13.84□□□□□ -0.19
RABGGTA-215ENST00000560207 TRIM29Q14134 588 aa13.84□□□□□ -0.19
RABGGTA-215ENST00000560207 COL13A1Q5TAT6 717 aaPredicted RBP13.84□□□□□ -0.19
RABGGTA-215ENST00000560207 MAP3K21Q5TCX8 1036 aa13.84□□□□□ -0.19
RABGGTA-215ENST00000560207 WWC2Q6AWC2 1192 aa13.84□□□□□ -0.19
RABGGTA-215ENST00000560207 KCNV1Q6PIU1 500 aa13.84□□□□□ -0.19
RABGGTA-215ENST00000560207 NPLOC4Q8TAT6 608 aa13.84□□□□□ -0.19
RABGGTA-215ENST00000560207 SYTL5Q8TDW5 730 aaPredicted RBP13.84□□□□□ -0.19
RABGGTA-215ENST00000560207 PIBF1Q8WXW3 757 aa13.84□□□□□ -0.19
RABGGTA-215ENST00000560207 TRIB2Q92519 343 aa13.84□□□□□ -0.19
RABGGTA-215ENST00000560207 PHKBQ93100 1093 aa13.84□□□□□ -0.19
RABGGTA-215ENST00000560207 ZNF333Q96JL9 665 aa13.84□□□□□ -0.19
RABGGTA-215ENST00000560207 RMDN3Q96TC7 470 aa13.84□□□□□ -0.19
RABGGTA-215ENST00000560207 TMEM106CQ9BVX2 250 aa13.84□□□□□ -0.19
RABGGTA-215ENST00000560207 BRMS1Q9HCU9 246 aa13.84□□□□□ -0.19
RABGGTA-215ENST00000560207 VTA1Q9NP79 307 aa13.84□□□□□ -0.19
RABGGTA-215ENST00000560207 ORC3Q9UBD5 711 aaPredicted RBP13.84□□□□□ -0.19
RABGGTA-215ENST00000560207 INHAP05111 366 aa13.83□□□□□ -0.2
RABGGTA-215ENST00000560207 PDIA4P13667 645 aaKnown RBP13.83□□□□□ -0.2
RABGGTA-215ENST00000560207 ALDH5A1P51649 535 aaPredicted RBP13.83□□□□□ -0.2
RABGGTA-215ENST00000560207 PDE4DQ08499 809 aa13.83□□□□□ -0.2
RABGGTA-215ENST00000560207 STXBP2Q15833 593 aa13.83□□□□□ -0.2
RABGGTA-215ENST00000560207 PKN1Q16512 942 aa13.83□□□□□ -0.2
RABGGTA-215ENST00000560207 ARHGEF16Q5VV41 709 aa13.83□□□□□ -0.2
RABGGTA-215ENST00000560207 NOL8Q76FK4 1167 aaKnown RBP13.83□□□□□ -0.2
RABGGTA-215ENST00000560207 TMX3Q96JJ7 454 aa13.83□□□□□ -0.2
RABGGTA-215ENST00000560207 LARP6Q9BRS8 491 aaKnown RBP13.83□□□□□ -0.2
RABGGTA-215ENST00000560207 OPLAHO14841 1288 aa13.82□□□□□ -0.2
RABGGTA-215ENST00000560207 EIF3JO75822 258 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-215ENST00000560207 PRKAR2AP13861 404 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-215ENST00000560207 ELNP15502 786 aa13.82□□□□□ -0.2
RABGGTA-215ENST00000560207 EDNRBP24530 442 aa13.82□□□□□ -0.2
RABGGTA-215ENST00000560207 CNTN2Q02246 1040 aa13.82□□□□□ -0.2
RABGGTA-215ENST00000560207 SLC30A10Q6XR72 485 aa13.82□□□□□ -0.2
RABGGTA-215ENST00000560207 ARMCX2Q7L311 632 aa13.82□□□□□ -0.2
RABGGTA-215ENST00000560207 REXO1Q8N1G1 1221 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms