RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 NUDT12Q9BQG2 462 aa12.59□□□□□ -0.39
TPM1-217ENST00000559108 VPS54Q9P1Q0 977 aa12.59□□□□□ -0.39
TPM1-217ENST00000559108 STK36Q9NRP7 1315 aa12.59□□□□□ -0.39
TPM1-217ENST00000559108 STRNO43815 780 aa12.58□□□□□ -0.4
TPM1-217ENST00000559108 ADCY3O60266 1144 aa12.58□□□□□ -0.4
TPM1-217ENST00000559108 ST18O60284 1047 aa12.58□□□□□ -0.4
TPM1-217ENST00000559108 GNRH1P01148 92 aa12.58□□□□□ -0.4
TPM1-217ENST00000559108 PTGS1P23219 599 aa12.58□□□□□ -0.4
TPM1-217ENST00000559108 CALML3P27482 149 aa12.58□□□□□ -0.4
TPM1-217ENST00000559108 CYP2C19P33261 490 aa12.58□□□□□ -0.4
TPM1-217ENST00000559108 RGS2P41220 211 aa12.58□□□□□ -0.4
TPM1-217ENST00000559108 UBE2SQ16763 222 aa12.58□□□□□ -0.4
TPM1-217ENST00000559108 FBXO46Q6PJ61 603 aaPredicted RBP12.58□□□□□ -0.4
TPM1-217ENST00000559108 RNF207Q6ZRF8 634 aa12.58□□□□□ -0.4
TPM1-217ENST00000559108 IL31RAQ8NI17 732 aa12.58□□□□□ -0.4
TPM1-217ENST00000559108 TAAR1Q96RJ0 339 aa12.58□□□□□ -0.4
TPM1-217ENST00000559108 KATNBL1Q9H079 304 aa12.58□□□□□ -0.4
TPM1-217ENST00000559108 TMEM260Q9NX78 707 aa12.58□□□□□ -0.4
TPM1-217ENST00000559108 BARHL2Q9NY43 387 aa12.58□□□□□ -0.4
TPM1-217ENST00000559108 SEC63Q9UGP8 760 aaKnown RBP12.58□□□□□ -0.4
TPM1-217ENST00000559108 FBXO40Q9UH90 709 aa12.58□□□□□ -0.4
TPM1-217ENST00000559108 IVNS1ABPQ9Y6Y0 642 aa12.58□□□□□ -0.4
TPM1-217ENST00000559108 SNAI1O95863 264 aaPredicted RBP12.57□□□□□ -0.4
TPM1-217ENST00000559108 CFBP00751 764 aa12.57□□□□□ -0.4
TPM1-217ENST00000559108 XRCC5P13010 732 aaKnown RBP12.57□□□□□ -0.4
TPM1-217ENST00000559108 FOSBP53539 338 aa12.57□□□□□ -0.4
TPM1-217ENST00000559108 SSRP1Q08945 709 aaKnown RBP12.57□□□□□ -0.4
TPM1-217ENST00000559108 PRAMEF19Q5SWL8 479 aa12.57□□□□□ -0.4
TPM1-217ENST00000559108 TMEM63BQ5T3F8 832 aa12.57□□□□□ -0.4
TPM1-217ENST00000559108 ZFP91Q96JP5 570 aaPredicted RBP12.57□□□□□ -0.4
TPM1-217ENST00000559108 PGBD1Q96JS3 809 aa12.57□□□□□ -0.4
TPM1-217ENST00000559108 CWC22Q9HCG8 908 aaKnown RBP12.57□□□□□ -0.4
TPM1-217ENST00000559108 MRPL11Q9Y3B7 192 aaKnown RBP12.57□□□□□ -0.4
TPM1-217ENST00000559108 BRCA2P51587 3418 aa12.56□□□□□ -0.4
TPM1-217ENST00000559108 POTEB2H3BUK9 544 aa12.56□□□□□ -0.4
TPM1-217ENST00000559108 CPLX1O14810 134 aa12.56□□□□□ -0.4
TPM1-217ENST00000559108 ADCY6O43306 1168 aa12.56□□□□□ -0.4
TPM1-217ENST00000559108 EDIL3O43854 480 aa12.56□□□□□ -0.4
TPM1-217ENST00000559108 MYCP01106 439 aaPredicted RBP12.56□□□□□ -0.4
TPM1-217ENST00000559108 INHAP05111 366 aa12.56□□□□□ -0.4
TPM1-217ENST00000559108 CLK2P49760 499 aaKnown RBP12.56□□□□□ -0.4
TPM1-217ENST00000559108 NAPAP54920 295 aa12.56□□□□□ -0.4
TPM1-217ENST00000559108 UBXN2AP68543 259 aa12.56□□□□□ -0.4
TPM1-217ENST00000559108 CUL4AQ13619 759 aa12.56□□□□□ -0.4
TPM1-217ENST00000559108 MTFR1Q15390 333 aa12.56□□□□□ -0.4
TPM1-217ENST00000559108 MAP3K21Q5TCX8 1036 aa12.56□□□□□ -0.4
TPM1-217ENST00000559108 DPP9Q86TI2 863 aa12.56□□□□□ -0.4
TPM1-217ENST00000559108 RGS22Q8NE09 1264 aa12.56□□□□□ -0.4
TPM1-217ENST00000559108 RAET1EQ8TD07 263 aa12.56□□□□□ -0.4
TPM1-217ENST00000559108 RASGRP4Q8TDF6 673 aa12.56□□□□□ -0.4
TPM1-217ENST00000559108 ZSCAN31Q96LW9 406 aaPredicted RBP12.56□□□□□ -0.4
TPM1-217ENST00000559108 SH2B1Q9NRF2 756 aaPredicted RBP12.56□□□□□ -0.4
TPM1-217ENST00000559108 ORC3Q9UBD5 711 aaPredicted RBP12.56□□□□□ -0.4
TPM1-217ENST00000559108 KCNJ14Q9UNX9 436 aa12.56□□□□□ -0.4
TPM1-217ENST00000559108 PFASO15067 1338 aa12.56□□□□□ -0.4
TPM1-217ENST00000559108 FRMPD4Q14CM0 1322 aa12.56□□□□□ -0.4
TPM1-217ENST00000559108 RPTORQ8N122 1335 aa12.56□□□□□ -0.4
TPM1-217ENST00000559108 M0R2N6 131 aa12.55□□□□□ -0.4
TPM1-217ENST00000559108 DEXIO95424 95 aa12.55□□□□□ -0.4
TPM1-217ENST00000559108 EDNRBP24530 442 aa12.55□□□□□ -0.4
TPM1-217ENST00000559108 HOXD10P28358 340 aa12.55□□□□□ -0.4
TPM1-217ENST00000559108 CCND3P30281 292 aaPredicted RBP12.55□□□□□ -0.4
TPM1-217ENST00000559108 GRK4P32298 578 aa12.55□□□□□ -0.4
TPM1-217ENST00000559108 ALDH5A1P51649 535 aaPredicted RBP12.55□□□□□ -0.4
TPM1-217ENST00000559108 PRMT2P55345 433 aa12.55□□□□□ -0.4
TPM1-217ENST00000559108 CACNB2Q08289 660 aaPredicted RBP12.55□□□□□ -0.4
TPM1-217ENST00000559108 OLFML2BQ68BL8 750 aa12.55□□□□□ -0.4
TPM1-217ENST00000559108 MAMDC4Q6UXC1 1216 aa12.55□□□□□ -0.4
TPM1-217ENST00000559108 OXER1Q8TDS5 423 aa12.55□□□□□ -0.4
TPM1-217ENST00000559108 MORC4Q8TE76 937 aa12.55□□□□□ -0.4
TPM1-217ENST00000559108 PXYLP1Q8TE99 480 aa12.55□□□□□ -0.4
TPM1-217ENST00000559108 SNX21Q969T3 373 aa12.55□□□□□ -0.4
TPM1-217ENST00000559108 LENG1Q96BZ8 264 aaPredicted RBP12.55□□□□□ -0.4
TPM1-217ENST00000559108 ARMC5Q96C12 935 aa12.55□□□□□ -0.4
TPM1-217ENST00000559108 ZNF333Q96JL9 665 aa12.55□□□□□ -0.4
TPM1-217ENST00000559108 TINF2Q9BSI4 451 aa12.55□□□□□ -0.4
TPM1-217ENST00000559108 ZMYND12Q9H0C1 365 aa12.55□□□□□ -0.4
TPM1-217ENST00000559108 RIC8AQ9NPQ8 531 aa12.55□□□□□ -0.4
TPM1-217ENST00000559108 ESYT2A0FGR8 921 aa12.54□□□□□ -0.4
TPM1-217ENST00000559108 FAM205CA6NFA0 338 aa12.54□□□□□ -0.4
TPM1-217ENST00000559108 SMCO2A6NFE2 343 aa12.54□□□□□ -0.4
TPM1-217ENST00000559108 PIK3CDO00329 1044 aa12.54□□□□□ -0.4
TPM1-217ENST00000559108 HMGCRP04035 888 aa12.54□□□□□ -0.4
TPM1-217ENST00000559108 CYBAP13498 195 aa12.54□□□□□ -0.4
TPM1-217ENST00000559108 EIF2AK2P19525 551 aaKnown RBP12.54□□□□□ -0.4
TPM1-217ENST00000559108 PPP1R18Q6NYC8 613 aa12.54□□□□□ -0.4
TPM1-217ENST00000559108 ARMCX2Q7L311 632 aa12.54□□□□□ -0.4
TPM1-217ENST00000559108 FCHSD1Q86WN1 690 aa12.54□□□□□ -0.4
TPM1-217ENST00000559108 SLAIN1Q8ND83 568 aa12.54□□□□□ -0.4
TPM1-217ENST00000559108 ALG1Q9BT22 464 aa12.54□□□□□ -0.4
TPM1-217ENST00000559108 UNC93B1Q9H1C4 597 aa12.54□□□□□ -0.4
TPM1-217ENST00000559108 PSTPIP2Q9H939 334 aa12.54□□□□□ -0.4
TPM1-217ENST00000559108 PXMP2Q9NR77 195 aa12.54□□□□□ -0.4
TPM1-217ENST00000559108 PNMA2Q9UL42 364 aa12.54□□□□□ -0.4
TPM1-217ENST00000559108 DIS3Q9Y2L1 958 aaKnown RBP12.54□□□□□ -0.4
TPM1-217ENST00000559108 POTEFA5A3E0 1075 aa12.53□□□□□ -0.4
TPM1-217ENST00000559108 GCOM1H8Y6P7 765 aaPredicted RBP12.53□□□□□ -0.4
TPM1-217ENST00000559108 hCG_1984214I3L0E3 225 aa12.53□□□□□ -0.4
TPM1-217ENST00000559108 K7ELQ4 463 aaPredicted RBP12.53□□□□□ -0.4
TPM1-217ENST00000559108 RGS20O76081 388 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms