RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 LRRC47Q8N1G4 583 aaKnown RBP8.78□□□□□ -1
LRRC28-211ENST00000558890 KCNG4Q8TDN1 519 aa8.78□□□□□ -1
LRRC28-211ENST00000558890 ERO1AQ96HE7 468 aa8.78□□□□□ -1
LRRC28-211ENST00000558890 PGBD1Q96JS3 809 aa8.78□□□□□ -1
LRRC28-211ENST00000558890 PORCNQ9H237 461 aa8.78□□□□□ -1
LRRC28-211ENST00000558890 MAP3K20Q9NYL2 800 aaKnown RBP8.78□□□□□ -1
LRRC28-211ENST00000558890 RCOR1Q9UKL0 485 aa8.78□□□□□ -1
LRRC28-211ENST00000558890 PPP1R9AQ9ULJ8 1098 aa8.78□□□□□ -1
LRRC28-211ENST00000558890 PTPN22Q9Y2R2 807 aa8.78□□□□□ -1
LRRC28-211ENST00000558890 MKI67P46013 3256 aaKnown RBP8.78□□□□□ -1
LRRC28-211ENST00000558890 COL11A1P12107 1806 aaPredicted RBP8.77□□□□□ -1
LRRC28-211ENST00000558890 VWA5AO00534 786 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 PRPF3O43395 683 aaKnown RBP8.77□□□□□ -1.01
LRRC28-211ENST00000558890 YEATS4O95619 227 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 TPM2P07951 284 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 PSMC4P43686 418 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 ERVK-9P63128 1117 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 ERVK-24P63145 666 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 IRX3P78415 501 aaPredicted RBP8.77□□□□□ -1.01
LRRC28-211ENST00000558890 PLCB2Q00722 1185 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 ATP2B2Q01814 1243 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 GUCY1B3Q02153 619 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 GHRHRQ02643 423 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 CEBPZQ03701 1054 aaKnown RBP8.77□□□□□ -1.01
LRRC28-211ENST00000558890 GNL2Q13823 731 aaKnown RBP8.77□□□□□ -1.01
LRRC28-211ENST00000558890 TMEM132BQ14DG7 1078 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 PKN2Q16513 984 aaKnown RBP8.77□□□□□ -1.01
LRRC28-211ENST00000558890 CAMK4Q16566 473 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 SLC35G1Q2M3R5 365 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 TKFCQ3LXA3 575 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 MCTP2Q6DN12 878 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 CKAP2LQ8IYA6 745 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 FSIP1Q8NA03 581 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 GPRC5AQ8NFJ5 357 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 MRPS27Q92552 414 aaKnown RBP8.77□□□□□ -1.01
LRRC28-211ENST00000558890 ATG4CQ96DT6 458 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 USP28Q96RU2 1077 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 SLF1Q9BQI6 1058 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 GLT8D2Q9H1C3 349 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 RANBP17Q9H2T7 1088 aaKnown RBP8.77□□□□□ -1.01
LRRC28-211ENST00000558890 EFCC1Q9HA90 598 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 GPHNQ9NQX3 736 aaPredicted RBP8.77□□□□□ -1.01
LRRC28-211ENST00000558890 SH3GLB2Q9NR46 395 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 FAM217BQ9NTX9 383 aaPredicted RBP8.77□□□□□ -1.01
LRRC28-211ENST00000558890 RTEL1Q9NZ71 1219 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 SRRDQ9UH36 339 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 ZNF214Q9UL59 606 aaPredicted RBP8.77□□□□□ -1.01
LRRC28-211ENST00000558890 GABRQQ9UN88 632 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 MRVI1Q9Y6F6 885 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 CNTNAP5Q8WYK1 1306 aa8.77□□□□□ -1.01
LRRC28-211ENST00000558890 ZSWIM8A7E2V4 1837 aa8.76□□□□□ -1.01
LRRC28-211ENST00000558890 A0A1W2PQ27 194 aa8.76□□□□□ -1.01
LRRC28-211ENST00000558890 A0A1W2PQ64 194 aa8.76□□□□□ -1.01
LRRC28-211ENST00000558890 A0A1W2PQD8 194 aa8.76□□□□□ -1.01
LRRC28-211ENST00000558890 ESYT2A0FGR8 921 aa8.76□□□□□ -1.01
LRRC28-211ENST00000558890 ZBTB5O15062 677 aa8.76□□□□□ -1.01
LRRC28-211ENST00000558890 NR1I2O75469 434 aa8.76□□□□□ -1.01
LRRC28-211ENST00000558890 OFD1O75665 1012 aa8.76□□□□□ -1.01
LRRC28-211ENST00000558890 DEXIO95424 95 aa8.76□□□□□ -1.01
LRRC28-211ENST00000558890 FMNL1O95466 1100 aaPredicted RBP8.76□□□□□ -1.01
LRRC28-211ENST00000558890 GNRH1P01148 92 aa8.76□□□□□ -1.01
LRRC28-211ENST00000558890 FDPSP14324 419 aaKnown RBP8.76□□□□□ -1.01
LRRC28-211ENST00000558890 FAM160A1Q05DH4 1040 aa8.76□□□□□ -1.01
LRRC28-211ENST00000558890 ZRSR1Q15695 479 aaKnown RBP8.76□□□□□ -1.01
LRRC28-211ENST00000558890 STX1AQ16623 288 aa8.76□□□□□ -1.01
LRRC28-211ENST00000558890 ANO6Q4KMQ2 910 aa8.76□□□□□ -1.01
LRRC28-211ENST00000558890 MORN1Q5T089 497 aa8.76□□□□□ -1.01
LRRC28-211ENST00000558890 SYDE2Q5VT97 1194 aa8.76□□□□□ -1.01
LRRC28-211ENST00000558890 TTBK2Q6IQ55 1244 aa8.76□□□□□ -1.01
LRRC28-211ENST00000558890 GALNT17Q6IS24 598 aa8.76□□□□□ -1.01
LRRC28-211ENST00000558890 NBPF11Q86T75 865 aa8.76□□□□□ -1.01
LRRC28-211ENST00000558890 FBXO18Q8NFZ0 1043 aa8.76□□□□□ -1.01
LRRC28-211ENST00000558890 SMCR8Q8TEV9 937 aaPredicted RBP8.76□□□□□ -1.01
LRRC28-211ENST00000558890 CCDC12Q8WUD4 166 aaPredicted RBP8.76□□□□□ -1.01
LRRC28-211ENST00000558890 RRP36Q96EU6 259 aaKnown RBP8.76□□□□□ -1.01
LRRC28-211ENST00000558890 ALG1Q9BT22 464 aa8.76□□□□□ -1.01
LRRC28-211ENST00000558890 MOV10L1Q9BXT6 1211 aaKnown RBP8.76□□□□□ -1.01
LRRC28-211ENST00000558890 SLC38A10Q9HBR0 1119 aa8.76□□□□□ -1.01
LRRC28-211ENST00000558890 POLR3EQ9NVU0 708 aa8.76□□□□□ -1.01
LRRC28-211ENST00000558890 TRIM17Q9Y577 477 aa8.76□□□□□ -1.01
LRRC28-211ENST00000558890 SMCHD1A6NHR9 2005 aa8.76□□□□□ -1.01
LRRC28-211ENST00000558890 ZNF536O15090 1300 aa8.76□□□□□ -1.01
LRRC28-211ENST00000558890 PNMA6FA0A0J9YX94 578 aa8.75□□□□□ -1.01
LRRC28-211ENST00000558890 TMEM232C9JQI7 657 aa8.75□□□□□ -1.01
LRRC28-211ENST00000558890 GOLGA6L19H0YKK7 550 aa8.75□□□□□ -1.01
LRRC28-211ENST00000558890 FLOT1O75955 427 aa8.75□□□□□ -1.01
LRRC28-211ENST00000558890 XBP1P17861 261 aa8.75□□□□□ -1.01
LRRC28-211ENST00000558890 CDC27P30260 824 aa8.75□□□□□ -1.01
LRRC28-211ENST00000558890 ADD1P35611 737 aaKnown RBP8.75□□□□□ -1.01
LRRC28-211ENST00000558890 PFKFB3Q16875 520 aaPredicted RBP8.75□□□□□ -1.01
LRRC28-211ENST00000558890 CCDC96Q2M329 555 aa8.75□□□□□ -1.01
LRRC28-211ENST00000558890 MYSM1Q5VVJ2 828 aa8.75□□□□□ -1.01
LRRC28-211ENST00000558890 FBXO46Q6PJ61 603 aaPredicted RBP8.75□□□□□ -1.01
LRRC28-211ENST00000558890 RAB11FIP4Q86YS3 637 aa8.75□□□□□ -1.01
LRRC28-211ENST00000558890 SHCBP1Q8NEM2 672 aa8.75□□□□□ -1.01
LRRC28-211ENST00000558890 CCDC148Q8NFR7 591 aa8.75□□□□□ -1.01
LRRC28-211ENST00000558890 NUP133Q8WUM0 1156 aa8.75□□□□□ -1.01
LRRC28-211ENST00000558890 ARMC5Q96C12 935 aa8.75□□□□□ -1.01
LRRC28-211ENST00000558890 ABHD8Q96I13 439 aa8.75□□□□□ -1.01
LRRC28-211ENST00000558890 TANGO6Q9C0B7 1094 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms