RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 NT5C2P49902 561 aa12.17□□□□□ -0.46
CSPG4P5-201ENST00000558731 FKBP1AP62942 108 aaKnown RBP12.17□□□□□ -0.46
CSPG4P5-201ENST00000558731 CYP4A11Q02928 519 aa12.17□□□□□ -0.46
CSPG4P5-201ENST00000558731 NBPF12Q5TAG4 269 aaPredicted RBP12.17□□□□□ -0.46
CSPG4P5-201ENST00000558731 SIAH1Q8IUQ4 282 aa12.17□□□□□ -0.46
CSPG4P5-201ENST00000558731 TBC1D5Q92609 795 aa12.17□□□□□ -0.46
CSPG4P5-201ENST00000558731 DPF2Q92785 391 aa12.17□□□□□ -0.46
CSPG4P5-201ENST00000558731 ANO3Q9BYT9 981 aa12.17□□□□□ -0.46
CSPG4P5-201ENST00000558731 DEFB129Q9H1M3 183 aa12.17□□□□□ -0.46
CSPG4P5-201ENST00000558731 MAST2Q6P0Q8 1798 aa12.17□□□□□ -0.46
CSPG4P5-201ENST00000558731 NRDCO43847 1150 aa12.16□□□□□ -0.46
CSPG4P5-201ENST00000558731 TPM3P06753 285 aa12.16□□□□□ -0.46
CSPG4P5-201ENST00000558731 STAT3P40763 770 aa12.16□□□□□ -0.46
CSPG4P5-201ENST00000558731 TNFAIP1Q13829 316 aa12.16□□□□□ -0.46
CSPG4P5-201ENST00000558731 TTLL12Q14166 644 aaPredicted RBP12.16□□□□□ -0.46
CSPG4P5-201ENST00000558731 NCAPH2Q6IBW4 605 aa12.16□□□□□ -0.46
CSPG4P5-201ENST00000558731 TUBE1Q9UJT0 475 aa12.16□□□□□ -0.46
CSPG4P5-201ENST00000558731 PCDHA12Q9UN75 941 aa12.16□□□□□ -0.46
CSPG4P5-201ENST00000558731 KIAA1551Q9HCM1 1747 aa12.16□□□□□ -0.46
CSPG4P5-201ENST00000558731 FLOT1O75955 427 aa12.16□□□□□ -0.46
CSPG4P5-201ENST00000558731 ALAS1P13196 640 aa12.16□□□□□ -0.46
CSPG4P5-201ENST00000558731 PLS1Q14651 629 aa12.16□□□□□ -0.46
CSPG4P5-201ENST00000558731 TATDN1Q6P1N9 297 aa12.16□□□□□ -0.46
CSPG4P5-201ENST00000558731 CACTINQ8WUQ7 758 aaKnown RBP12.16□□□□□ -0.46
CSPG4P5-201ENST00000558731 ZKSCAN4Q969J2 545 aaPredicted RBP12.16□□□□□ -0.46
CSPG4P5-201ENST00000558731 PCMTD1Q96MG8 357 aaPredicted RBP12.16□□□□□ -0.46
CSPG4P5-201ENST00000558731 SYNRGQ9UMZ2 1314 aa12.16□□□□□ -0.46
CSPG4P5-201ENST00000558731 SFPQP23246 707 aaKnown RBP eCLIP12.16□□□□□ -0.46
CSPG4P5-201ENST00000558731 PDE4DQ08499 809 aa12.16□□□□□ -0.46
CSPG4P5-201ENST00000558731 SPP2Q13103 211 aa12.16□□□□□ -0.46
CSPG4P5-201ENST00000558731 GRIPAP1Q4V328 841 aa12.16□□□□□ -0.46
CSPG4P5-201ENST00000558731 FAM177A1Q8N128 213 aaPredicted RBP12.16□□□□□ -0.46
CSPG4P5-201ENST00000558731 MLKLQ8NB16 471 aa12.16□□□□□ -0.46
CSPG4P5-201ENST00000558731 MRIQ9BWK5 157 aa12.16□□□□□ -0.46
CSPG4P5-201ENST00000558731 EXOC1Q9NV70 894 aa12.16□□□□□ -0.46
CSPG4P5-201ENST00000558731 MEIS1O00470 390 aa12.15□□□□□ -0.46
CSPG4P5-201ENST00000558731 RPN1P04843 607 aaKnown RBP12.15□□□□□ -0.46
CSPG4P5-201ENST00000558731 SKILP12757 684 aa12.15□□□□□ -0.46
CSPG4P5-201ENST00000558731 TERF1P54274 439 aa12.15□□□□□ -0.46
CSPG4P5-201ENST00000558731 MCM6Q14566 821 aa12.15□□□□□ -0.46
CSPG4P5-201ENST00000558731 KIAA1755Q5JYT7 1200 aa12.15□□□□□ -0.46
CSPG4P5-201ENST00000558731 ARL6IP4Q66PJ3 421 aaKnown RBP12.15□□□□□ -0.46
CSPG4P5-201ENST00000558731 WRNIP1Q96S55 665 aa12.15□□□□□ -0.46
CSPG4P5-201ENST00000558731 RIC8AQ9NPQ8 531 aa12.15□□□□□ -0.46
CSPG4P5-201ENST00000558731 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.15□□□□□ -0.46
CSPG4P5-201ENST00000558731 ECM2O94769 699 aaPredicted RBP12.15□□□□□ -0.46
CSPG4P5-201ENST00000558731 ASNSP08243 561 aa12.15□□□□□ -0.46
CSPG4P5-201ENST00000558731 NOLC1Q14978 699 aaKnown RBP eCLIP12.15□□□□□ -0.46
CSPG4P5-201ENST00000558731 HS1BP3Q53T59 392 aa12.15□□□□□ -0.46
CSPG4P5-201ENST00000558731 PLA2G4DQ86XP0 818 aa12.15□□□□□ -0.46
CSPG4P5-201ENST00000558731 GPIHBP1Q8IV16 184 aa12.15□□□□□ -0.46
CSPG4P5-201ENST00000558731 TRIM47Q96LD4 638 aa12.15□□□□□ -0.46
CSPG4P5-201ENST00000558731 GMLQ99445 158 aa12.15□□□□□ -0.46
CSPG4P5-201ENST00000558731 VPS16Q9H269 839 aa12.15□□□□□ -0.46
CSPG4P5-201ENST00000558731 KCNF1Q9H3M0 494 aa12.15□□□□□ -0.46
CSPG4P5-201ENST00000558731 DDX60LQ5H9U9 1706 aaKnown RBP12.15□□□□□ -0.46
CSPG4P5-201ENST00000558731 ZNF500O60304 480 aaPredicted RBP12.15□□□□□ -0.46
CSPG4P5-201ENST00000558731 SNHG28P0DPA3 235 aa12.15□□□□□ -0.46
CSPG4P5-201ENST00000558731 CAP2P40123 477 aa12.15□□□□□ -0.46
CSPG4P5-201ENST00000558731 NSMFQ6X4W1 530 aa12.15□□□□□ -0.46
CSPG4P5-201ENST00000558731 GGA3Q9NZ52 723 aa12.15□□□□□ -0.46
CSPG4P5-201ENST00000558731 TRIM49BA6NDI0 452 aa12.14□□□□□ -0.47
CSPG4P5-201ENST00000558731 DAGLBQ8NCG7 672 aa12.14□□□□□ -0.47
CSPG4P5-201ENST00000558731 CCDC94Q9BW85 323 aaPredicted RBP12.14□□□□□ -0.47
CSPG4P5-201ENST00000558731 CCPG1Q9ULG6 757 aa12.14□□□□□ -0.47
CSPG4P5-201ENST00000558731 TNS1Q9HBL0 1735 aaKnown RBP12.14□□□□□ -0.47
CSPG4P5-201ENST00000558731 CD44P16070 742 aaKnown RBP12.14□□□□□ -0.47
CSPG4P5-201ENST00000558731 MTMR2Q13614 643 aa12.14□□□□□ -0.47
CSPG4P5-201ENST00000558731 FHDC1Q9C0D6 1143 aaPredicted RBP12.14□□□□□ -0.47
CSPG4P5-201ENST00000558731 SLC39A2Q9NP94 309 aa12.14□□□□□ -0.47
CSPG4P5-201ENST00000558731 PICK1Q9NRD5 415 aa12.14□□□□□ -0.47
CSPG4P5-201ENST00000558731 ZNF541Q9H0D2 1346 aa12.14□□□□□ -0.47
CSPG4P5-201ENST00000558731 GTPBP6O43824 516 aaPredicted RBP12.14□□□□□ -0.47
CSPG4P5-201ENST00000558731 SORBS3O60504 671 aa12.14□□□□□ -0.47
CSPG4P5-201ENST00000558731 EPS15P42566 896 aa12.14□□□□□ -0.47
CSPG4P5-201ENST00000558731 STIM1Q13586 685 aa12.14□□□□□ -0.47
CSPG4P5-201ENST00000558731 ZNF771Q7L3S4 317 aaPredicted RBP12.14□□□□□ -0.47
CSPG4P5-201ENST00000558731 CYP2W1Q8TAV3 490 aa12.14□□□□□ -0.47
CSPG4P5-201ENST00000558731 CHURC1Q8WUH1 139 aa12.14□□□□□ -0.47
CSPG4P5-201ENST00000558731 NELFBQ8WX92 580 aa12.14□□□□□ -0.47
CSPG4P5-201ENST00000558731 TMX1Q9H3N1 280 aa12.14□□□□□ -0.47
CSPG4P5-201ENST00000558731 RNF181Q9P0P0 153 aa12.14□□□□□ -0.47
CSPG4P5-201ENST00000558731 LAMB1P07942 1786 aa12.14□□□□□ -0.47
CSPG4P5-201ENST00000558731 CBFA2T2O43439 604 aa12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 DDNO94850 711 aaPredicted RBP12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 ARHGAP4P98171 946 aa12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 MDM2Q00987 491 aaPredicted RBP12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 SP4Q02446 784 aa12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 MORC3Q14149 939 aa12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 NCAPHQ15003 741 aa12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 SV2BQ7L1I2 683 aa12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 CCDC125Q86Z20 511 aa12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 ANKRD20A12PQ8NF67 263 aa12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 NUDT12Q9BQG2 462 aa12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 SH2D4AQ9H788 454 aa12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 RAVER2Q9HCJ3 691 aaKnown RBP12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 KIAA1024Q9UPX6 916 aa12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 N4BP3O15049 544 aa12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 C4orf32Q8N8J7 132 aa12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 RGS22Q8NE09 1264 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms