RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 GNEQ9Y223 722 aaKnown RBP13.92□□□□□ -0.18
HERC1-202ENST00000558324 LAMA3Q16787 3333 aa13.92□□□□□ -0.18
HERC1-202ENST00000558324 SZT2Q5T011 3432 aa13.92□□□□□ -0.18
HERC1-202ENST00000558324 DCDC2CA8MYV0 355 aa13.91□□□□□ -0.18
HERC1-202ENST00000558324 E7EWF7 191 aa13.91□□□□□ -0.18
HERC1-202ENST00000558324 IFIT3O14879 490 aaKnown RBP13.91□□□□□ -0.18
HERC1-202ENST00000558324 ITGB8P26012 769 aa13.91□□□□□ -0.18
HERC1-202ENST00000558324 PDE4DQ08499 809 aa13.91□□□□□ -0.18
HERC1-202ENST00000558324 FSCN1Q16658 493 aaKnown RBP13.91□□□□□ -0.18
HERC1-202ENST00000558324 LRIT3Q3SXY7 679 aa13.91□□□□□ -0.18
HERC1-202ENST00000558324 CXCL17Q6UXB2 119 aa13.91□□□□□ -0.18
HERC1-202ENST00000558324 MORC4Q8TE76 937 aa13.91□□□□□ -0.18
HERC1-202ENST00000558324 JMJD4Q9H9V9 463 aa13.91□□□□□ -0.18
HERC1-202ENST00000558324 SENP2Q9HC62 589 aa13.91□□□□□ -0.18
HERC1-202ENST00000558324 RBM8AQ9Y5S9 174 aaKnown RBP13.91□□□□□ -0.18
HERC1-202ENST00000558324 ABCB11O95342 1321 aa13.9□□□□□ -0.18
HERC1-202ENST00000558324 A0A0U1RQG5 324 aaPredicted RBP13.9□□□□□ -0.18
HERC1-202ENST00000558324 ERICH2A1L162 156 aa13.9□□□□□ -0.18
HERC1-202ENST00000558324 RAG1P15918 1043 aa13.9□□□□□ -0.18
HERC1-202ENST00000558324 FAAP100Q0VG06 881 aa13.9□□□□□ -0.18
HERC1-202ENST00000558324 C9orf50Q5SZB4 431 aa13.9□□□□□ -0.18
HERC1-202ENST00000558324 IQSEC1Q6DN90 963 aa13.9□□□□□ -0.18
HERC1-202ENST00000558324 Q7L0L9 218 aa13.9□□□□□ -0.18
HERC1-202ENST00000558324 ANKRD33Q7Z3H0 272 aa13.9□□□□□ -0.18
HERC1-202ENST00000558324 FBXO11Q86XK2 927 aa13.9□□□□□ -0.18
HERC1-202ENST00000558324 NCOA7Q8NI08 942 aa13.9□□□□□ -0.18
HERC1-202ENST00000558324 TBC1D5Q92609 795 aa13.9□□□□□ -0.18
HERC1-202ENST00000558324 WDR11Q9BZH6 1224 aa13.9□□□□□ -0.18
HERC1-202ENST00000558324 ELP1O95163 1332 aa13.9□□□□□ -0.19
HERC1-202ENST00000558324 KLRF2D3W0D1 207 aa13.89□□□□□ -0.19
HERC1-202ENST00000558324 KIAA0355O15063 1070 aa13.89□□□□□ -0.19
HERC1-202ENST00000558324 WTAPQ15007 396 aa13.89□□□□□ -0.19
HERC1-202ENST00000558324 SHHQ15465 462 aa13.89□□□□□ -0.19
HERC1-202ENST00000558324 TMEM67Q5HYA8 995 aa13.89□□□□□ -0.19
HERC1-202ENST00000558324 HOMER1Q86YM7 354 aa13.89□□□□□ -0.19
HERC1-202ENST00000558324 MAP4K1Q92918 833 aa13.89□□□□□ -0.19
HERC1-202ENST00000558324 TOX2Q96NM4 488 aa13.89□□□□□ -0.19
HERC1-202ENST00000558324 MPHOSPH6Q99547 160 aaKnown RBP13.89□□□□□ -0.19
HERC1-202ENST00000558324 MAD2L2Q9UI95 211 aa13.89□□□□□ -0.19
HERC1-202ENST00000558324 MROH7Q68CQ1 1323 aa13.89□□□□□ -0.19
HERC1-202ENST00000558324 ARVCFO00192 962 aa13.88□□□□□ -0.19
HERC1-202ENST00000558324 ZEB2O60315 1214 aa13.88□□□□□ -0.19
HERC1-202ENST00000558324 PSMC6P62333 389 aa13.88□□□□□ -0.19
HERC1-202ENST00000558324 NKX3-2P78367 333 aa13.88□□□□□ -0.19
HERC1-202ENST00000558324 SART3Q15020 963 aaKnown RBP13.88□□□□□ -0.19
HERC1-202ENST00000558324 DUSP28Q4G0W2 176 aa13.88□□□□□ -0.19
HERC1-202ENST00000558324 CENPQQ7L2Z9 268 aaPredicted RBP13.88□□□□□ -0.19
HERC1-202ENST00000558324 DNERQ8NFT8 737 aa13.88□□□□□ -0.19
HERC1-202ENST00000558324 OR6J1Q8NGC5 347 aa13.88□□□□□ -0.19
HERC1-202ENST00000558324 TAAR1Q96RJ0 339 aa13.88□□□□□ -0.19
HERC1-202ENST00000558324 COL20A1Q9P218 1284 aa13.88□□□□□ -0.19
HERC1-202ENST00000558324 MRPL11Q9Y3B7 192 aaKnown RBP13.88□□□□□ -0.19
HERC1-202ENST00000558324 LOC102724159A0A0B4J2E5 919 aa13.87□□□□□ -0.19
HERC1-202ENST00000558324 PALM3A6NDB9 673 aaPredicted RBP13.87□□□□□ -0.19
HERC1-202ENST00000558324 PPP1R11O60927 126 aaPredicted RBP13.87□□□□□ -0.19
HERC1-202ENST00000558324 CFBP00751 764 aa13.87□□□□□ -0.19
HERC1-202ENST00000558324 EDNRBP24530 442 aa13.87□□□□□ -0.19
HERC1-202ENST00000558324 CDK7P50613 346 aa13.87□□□□□ -0.19
HERC1-202ENST00000558324 EPHB4P54760 987 aa13.87□□□□□ -0.19
HERC1-202ENST00000558324 ANTXR2P58335 489 aa13.87□□□□□ -0.19
HERC1-202ENST00000558324 FPGSQ05932 587 aa13.87□□□□□ -0.19
HERC1-202ENST00000558324 GRM4Q14833 912 aa13.87□□□□□ -0.19
HERC1-202ENST00000558324 PPP2R5BQ15173 497 aa13.87□□□□□ -0.19
HERC1-202ENST00000558324 PWP2Q15269 919 aaKnown RBP13.87□□□□□ -0.19
HERC1-202ENST00000558324 MCF2L2Q86YR7 1114 aa13.87□□□□□ -0.19
HERC1-202ENST00000558324 FAM126BQ8IXS8 530 aa13.87□□□□□ -0.19
HERC1-202ENST00000558324 MB21D2Q8IYB1 491 aaPredicted RBP13.87□□□□□ -0.19
HERC1-202ENST00000558324 DEFB123Q8N688 67 aa13.87□□□□□ -0.19
HERC1-202ENST00000558324 RGS22Q8NE09 1264 aa13.87□□□□□ -0.19
HERC1-202ENST00000558324 SYTL5Q8TDW5 730 aaPredicted RBP13.87□□□□□ -0.19
HERC1-202ENST00000558324 PIBF1Q8WXW3 757 aa13.87□□□□□ -0.19
HERC1-202ENST00000558324 COPS5Q92905 334 aa13.87□□□□□ -0.19
HERC1-202ENST00000558324 ESYT1Q9BSJ8 1104 aa13.87□□□□□ -0.19
HERC1-202ENST00000558324 AMNQ9BXJ7 453 aa13.87□□□□□ -0.19
HERC1-202ENST00000558324 PPP1R12CQ9BZL4 782 aa13.87□□□□□ -0.19
HERC1-202ENST00000558324 LSG1Q9H089 658 aaKnown RBP13.87□□□□□ -0.19
HERC1-202ENST00000558324 ANO2Q9NQ90 1003 aa13.87□□□□□ -0.19
HERC1-202ENST00000558324 GPHNQ9NQX3 736 aaPredicted RBP13.87□□□□□ -0.19
HERC1-202ENST00000558324 TBX21Q9UL17 535 aa13.87□□□□□ -0.19
HERC1-202ENST00000558324 Q9Y3F1 56 aa13.87□□□□□ -0.19
HERC1-202ENST00000558324 RBM47A0AV96 593 aaKnown RBP13.86□□□□□ -0.19
HERC1-202ENST00000558324 B4DLN1 442 aa13.86□□□□□ -0.19
HERC1-202ENST00000558324 TLR3O15455 904 aaKnown RBP13.86□□□□□ -0.19
HERC1-202ENST00000558324 CABYRO75952 493 aa13.86□□□□□ -0.19
HERC1-202ENST00000558324 MYL3P08590 195 aa13.86□□□□□ -0.19
HERC1-202ENST00000558324 EIF2AK2P19525 551 aaKnown RBP13.86□□□□□ -0.19
HERC1-202ENST00000558324 MRPL12P52815 198 aaKnown RBP13.86□□□□□ -0.19
HERC1-202ENST00000558324 ITGA7Q13683 1181 aa13.86□□□□□ -0.19
HERC1-202ENST00000558324 SLC35G1Q2M3R5 365 aa13.86□□□□□ -0.19
HERC1-202ENST00000558324 CATIPQ7Z7H3 387 aa13.86□□□□□ -0.19
HERC1-202ENST00000558324 SCFD2Q8WU76 684 aa13.86□□□□□ -0.19
HERC1-202ENST00000558324 PIGSQ96S52 555 aa13.86□□□□□ -0.19
HERC1-202ENST00000558324 RMDN3Q96TC7 470 aa13.86□□□□□ -0.19
HERC1-202ENST00000558324 MYL10Q9BUA6 226 aa13.86□□□□□ -0.19
HERC1-202ENST00000558324 SLC27A2O14975 620 aa13.85□□□□□ -0.19
HERC1-202ENST00000558324 ZBTB5O15062 677 aa13.85□□□□□ -0.19
HERC1-202ENST00000558324 PRC1O43663 620 aa13.85□□□□□ -0.19
HERC1-202ENST00000558324 ARIH2O95376 493 aa13.85□□□□□ -0.19
HERC1-202ENST00000558324 TIMP1P01033 207 aa13.85□□□□□ -0.19
HERC1-202ENST00000558324 TXNP10599 105 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms