RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 TEX13BQ9BXU2 312 aa9.13□□□□□ -0.95
RTF1-205ENST00000558298 AGXT2Q9BYV1 514 aa9.13□□□□□ -0.95
RTF1-205ENST00000558298 SPATC1LQ9H0A9 340 aa9.13□□□□□ -0.95
RTF1-205ENST00000558298 PORCNQ9H237 461 aa9.13□□□□□ -0.95
RTF1-205ENST00000558298 MROH8Q9H579 483 aa9.13□□□□□ -0.95
RTF1-205ENST00000558298 INCENPQ9NQS7 918 aa9.13□□□□□ -0.95
RTF1-205ENST00000558298 BTBD7Q9P203 1132 aa9.13□□□□□ -0.95
RTF1-205ENST00000558298 LCTP09848 1927 aa9.12□□□□□ -0.95
RTF1-205ENST00000558298 STX6O43752 255 aa9.12□□□□□ -0.95
RTF1-205ENST00000558298 DDAH1O94760 285 aa9.12□□□□□ -0.95
RTF1-205ENST00000558298 SMARCA1P28370 1054 aa9.12□□□□□ -0.95
RTF1-205ENST00000558298 USP8P40818 1118 aa9.12□□□□□ -0.95
RTF1-205ENST00000558298 ANTXR2P58335 489 aa9.12□□□□□ -0.95
RTF1-205ENST00000558298 KRT85P78386 507 aa9.12□□□□□ -0.95
RTF1-205ENST00000558298 TROAPQ12815 778 aa9.12□□□□□ -0.95
RTF1-205ENST00000558298 TMEM132BQ14DG7 1078 aa9.12□□□□□ -0.95
RTF1-205ENST00000558298 MTFR1Q15390 333 aa9.12□□□□□ -0.95
RTF1-205ENST00000558298 TKFCQ3LXA3 575 aa9.12□□□□□ -0.95
RTF1-205ENST00000558298 MORN1Q5T089 497 aa9.12□□□□□ -0.95
RTF1-205ENST00000558298 MAP3K21Q5TCX8 1036 aa9.12□□□□□ -0.95
RTF1-205ENST00000558298 TMCO3Q6UWJ1 677 aa9.12□□□□□ -0.95
RTF1-205ENST00000558298 CYB5R4Q7L1T6 521 aa9.12□□□□□ -0.95
RTF1-205ENST00000558298 TRMT44Q8IYL2 757 aaKnown RBP9.12□□□□□ -0.95
RTF1-205ENST00000558298 SPICE1Q8N0Z3 855 aa9.12□□□□□ -0.95
RTF1-205ENST00000558298 IGDCC4Q8TDY8 1250 aa9.12□□□□□ -0.95
RTF1-205ENST00000558298 ATG4CQ96DT6 458 aa9.12□□□□□ -0.95
RTF1-205ENST00000558298 MYCBPQ99417 103 aaPredicted RBP9.12□□□□□ -0.95
RTF1-205ENST00000558298 TM6SF1Q9BZW5 370 aa9.12□□□□□ -0.95
RTF1-205ENST00000558298 NAT10Q9H0A0 1025 aaKnown RBP9.12□□□□□ -0.95
RTF1-205ENST00000558298 NUP62CLQ9H1M0 184 aa9.12□□□□□ -0.95
RTF1-205ENST00000558298 RANBP17Q9H2T7 1088 aaKnown RBP9.12□□□□□ -0.95
RTF1-205ENST00000558298 PAK6Q9NQU5 681 aaPredicted RBP9.12□□□□□ -0.95
RTF1-205ENST00000558298 TOMM22Q9NS69 142 aa9.12□□□□□ -0.95
RTF1-205ENST00000558298 TAF6LQ9Y6J9 622 aa9.12□□□□□ -0.95
RTF1-205ENST00000558298 LOC102724159A0A0B4J2E5 919 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 ERICH2A1L162 156 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 GOLGA6L4A6NEF3 574 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 GOLGA6L9A6NEM1 432 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 SLC15A5A6NIM6 579 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 GOLGA6L19H0YKK7 550 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 SH2B2O14492 632 aaPredicted RBP9.11□□□□□ -0.95
RTF1-205ENST00000558298 ADCY3O60266 1144 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 BRD2P25440 801 aaKnown RBP9.11□□□□□ -0.95
RTF1-205ENST00000558298 CASQ1P31415 396 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 EXOSC10Q01780 885 aaKnown RBP9.11□□□□□ -0.95
RTF1-205ENST00000558298 ATP2B2Q01814 1243 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 PWP2Q15269 919 aaKnown RBP9.11□□□□□ -0.95
RTF1-205ENST00000558298 IFIT1BQ5T764 474 aaKnown RBP9.11□□□□□ -0.95
RTF1-205ENST00000558298 DHX32Q7L7V1 743 aaKnown RBP9.11□□□□□ -0.95
RTF1-205ENST00000558298 GPR142Q7Z601 462 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 NBPF11Q86T75 865 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 PLA2G4DQ86XP0 818 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 STK11IPQ8N1F8 1099 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 CEP120Q8N960 986 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 CCDC150Q8NCX0 1101 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 RGS22Q8NE09 1264 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 RAET1EQ8TD07 263 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 TRIB2Q92519 343 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 EXOC4Q96A65 974 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 COA7Q96BR5 231 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 MTMR8Q96EF0 704 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 ZNF830Q96NB3 372 aaPredicted RBP9.11□□□□□ -0.95
RTF1-205ENST00000558298 MOV10L1Q9BXT6 1211 aaKnown RBP9.11□□□□□ -0.95
RTF1-205ENST00000558298 DEF6Q9H4E7 631 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 KAT14Q9H8E8 782 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 LY9Q9HBG7 655 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 FBXO28Q9NVF7 368 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 FBXO40Q9UH90 709 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 FEZ2Q9UHY8 353 aaPredicted RBP9.11□□□□□ -0.95
RTF1-205ENST00000558298 SMC3Q9UQE7 1217 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 DIS3Q9Y2L1 958 aaKnown RBP9.11□□□□□ -0.95
RTF1-205ENST00000558298 ALPK3Q96L96 1907 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 LRRC37A2A6NM11 1700 aa9.11□□□□□ -0.95
RTF1-205ENST00000558298 SMCHD1A6NHR9 2005 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 ZNF536O15090 1300 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 PALM3A6NDB9 673 aaPredicted RBP9.1□□□□□ -0.95
RTF1-205ENST00000558298 POTEB2H3BUK9 544 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 KIF1CO43896 1103 aaKnown RBP9.1□□□□□ -0.95
RTF1-205ENST00000558298 ECM2O94769 699 aaPredicted RBP9.1□□□□□ -0.95
RTF1-205ENST00000558298 F13A1P00488 732 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 INHAP05111 366 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 GJB1P08034 283 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 ELNP15502 786 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 H2AFXP16104 143 aaPredicted RBP9.1□□□□□ -0.95
RTF1-205ENST00000558298 EN2P19622 333 aaPredicted RBP9.1□□□□□ -0.95
RTF1-205ENST00000558298 PTPREP23469 700 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 GJA8P48165 433 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 ZNF75DP51815 510 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 EVCP57679 992 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 GHRHRQ02643 423 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 PKP1Q13835 747 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 GRM4Q14833 912 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 WTAPQ15007 396 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 PPP2R5BQ15173 497 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 RBM43Q6ZSC3 357 aaKnown RBP9.1□□□□□ -0.95
RTF1-205ENST00000558298 NYAP1Q6ZVC0 841 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 PLEKHH3Q7Z736 793 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 RASEFQ8IZ41 740 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 CHST13Q8NET6 341 aa9.1□□□□□ -0.95
RTF1-205ENST00000558298 DDX11Q96FC9 970 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms